RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 CDC42BPAQ5VT25 1732 aa19.9■□□□□ 0.78
SEC13-203ENST00000383801 ABCC5O15440 1437 aa19.88■□□□□ 0.77
SEC13-203ENST00000383801 CAMSAP2Q08AD1 1489 aa19.88■□□□□ 0.77
SEC13-203ENST00000383801 RSPH4AQ5TD94 716 aa19.88■□□□□ 0.77
SEC13-203ENST00000383801 MAPKBP1O60336 1514 aa19.85■□□□□ 0.77
SEC13-203ENST00000383801 ZCCHC11Q5TAX3 1644 aaKnown RBP19.84■□□□□ 0.77
SEC13-203ENST00000383801 ADGRL2O95490 1459 aa19.83■□□□□ 0.77
SEC13-203ENST00000383801 PREX2Q70Z35 1606 aa19.82■□□□□ 0.76
SEC13-203ENST00000383801 SHANK2Q9UPX8 1470 aa19.82■□□□□ 0.76
SEC13-203ENST00000383801 ARHGEF5Q12774 1597 aa19.81■□□□□ 0.76
SEC13-203ENST00000383801 ZNF644Q9H582 1327 aaPredicted RBP19.8■□□□□ 0.76
SEC13-203ENST00000383801 CROCC2H7BZ55 1655 aa19.8■□□□□ 0.76
SEC13-203ENST00000383801 ADGBQ8N7X0 1667 aa19.8■□□□□ 0.76
SEC13-203ENST00000383801 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.79■□□□□ 0.764e-7■■■■□ 22.2
SEC13-203ENST00000383801 PLEKHH2Q8IVE3 1493 aa19.79■□□□□ 0.76
SEC13-203ENST00000383801 CHIC2Q9UKJ5 165 aa19.78■□□□□ 0.76
SEC13-203ENST00000383801 CDC42BPBQ9Y5S2 1711 aa19.77■□□□□ 0.76
SEC13-203ENST00000383801 RRP7BPQ9NSQ0 103 aa19.77■□□□□ 0.76
SEC13-203ENST00000383801 NCOA1Q15788 1441 aa19.77■□□□□ 0.76
SEC13-203ENST00000383801 ANKRD30AQ9BXX3 1397 aa19.77■□□□□ 0.75
SEC13-203ENST00000383801 MYO5CQ9NQX4 1742 aa19.76■□□□□ 0.75
SEC13-203ENST00000383801 KIAA1107Q9UPP5 1409 aa19.75■□□□□ 0.75
SEC13-203ENST00000383801 TSPY4P0CV99 314 aa19.75■□□□□ 0.75
SEC13-203ENST00000383801 TSPY10P0CW01 314 aa19.75■□□□□ 0.75
SEC13-203ENST00000383801 ARAP3Q8WWN8 1544 aa19.75■□□□□ 0.75
SEC13-203ENST00000383801 ZNF777Q9ULD5 760 aaPredicted RBP19.74■□□□□ 0.75
SEC13-203ENST00000383801 ZNF316A6NFI3 1004 aaPredicted RBP19.73■□□□□ 0.75
SEC13-203ENST00000383801 PLCH2O75038 1416 aa19.73■□□□□ 0.75
SEC13-203ENST00000383801 MBD5Q9P267 1494 aa19.73■□□□□ 0.75
SEC13-203ENST00000383801 TTC37Q6PGP7 1564 aa19.71■□□□□ 0.75
SEC13-203ENST00000383801 SAMD9LQ8IVG5 1584 aa19.7■□□□□ 0.74
SEC13-203ENST00000383801 CCDC141Q6ZP82 1450 aa19.7■□□□□ 0.74
SEC13-203ENST00000383801 WDR7Q9Y4E6 1490 aa19.7■□□□□ 0.74
SEC13-203ENST00000383801 ARHGAP5Q13017 1502 aa19.69■□□□□ 0.74
SEC13-203ENST00000383801 MAST1Q9Y2H9 1570 aa19.68■□□□□ 0.74
SEC13-203ENST00000383801 C9orf84Q5VXU9 1444 aa19.68■□□□□ 0.74
SEC13-203ENST00000383801 EFCAB2Q5VUJ9 269 aa19.67■□□□□ 0.74
SEC13-203ENST00000383801 NPM1P06748 294 aaKnown RBP eCLIP19.66■□□□□ 0.74
SEC13-203ENST00000383801 TRIM52Q96A61 297 aa19.65■□□□□ 0.74
SEC13-203ENST00000383801 KCNH8Q96L42 1107 aa19.65■□□□□ 0.74
SEC13-203ENST00000383801 MPHOSPH9Q99550 1183 aa19.65■□□□□ 0.74
SEC13-203ENST00000383801 KDM6BO15054 1643 aa19.64■□□□□ 0.73
SEC13-203ENST00000383801 ANKRD50Q9ULJ7 1429 aa19.63■□□□□ 0.73
SEC13-203ENST00000383801 HNRNPMP52272 730 aaKnown RBP eCLIP19.62■□□□□ 0.73
SEC13-203ENST00000383801 ABCA9Q8IUA7 1624 aa19.62■□□□□ 0.73
SEC13-203ENST00000383801 SIN3AQ96ST3 1273 aa19.6■□□□□ 0.73
SEC13-203ENST00000383801 ASXL2Q76L83 1435 aa19.59■□□□□ 0.73
SEC13-203ENST00000383801 SYCP2Q9BX26 1530 aa19.59■□□□□ 0.73
SEC13-203ENST00000383801 PPP1R15AO75807 674 aaPredicted RBP19.57■□□□□ 0.72
SEC13-203ENST00000383801 NEUROD1Q13562 356 aa19.57■□□□□ 0.72
SEC13-203ENST00000383801 DENND4BO75064 1496 aaPredicted RBP19.57■□□□□ 0.72
SEC13-203ENST00000383801 TONSLQ96HA7 1378 aa19.57■□□□□ 0.72
SEC13-203ENST00000383801 KIF15Q9NS87 1388 aa19.57■□□□□ 0.72
SEC13-203ENST00000383801 PLXNC1O60486 1568 aa19.57■□□□□ 0.72
SEC13-203ENST00000383801 ABCC1P33527 1531 aa19.56■□□□□ 0.72
SEC13-203ENST00000383801 KDM5DQ9BY66 1539 aa19.56■□□□□ 0.72
SEC13-203ENST00000383801 RTEL1-TNFRSF6BF6WH68 1400 aa19.55■□□□□ 0.72
SEC13-203ENST00000383801 DIEXFQ68CQ4 756 aaKnown RBP19.54■□□□□ 0.72
SEC13-203ENST00000383801 SLC4A1APQ9BWU0 796 aaKnown RBP19.54■□□□□ 0.72
SEC13-203ENST00000383801 ANKRD30BQ9BXX2 1392 aa19.53■□□□□ 0.72
SEC13-203ENST00000383801 PZPP20742 1482 aa19.52■□□□□ 0.71
SEC13-203ENST00000383801 DUOX2Q9NRD8 1548 aa19.5■□□□□ 0.71
SEC13-203ENST00000383801 ARHGEF12Q9NZN5 1544 aa19.5■□□□□ 0.71
SEC13-203ENST00000383801 FANCAO15360 1455 aa19.49■□□□□ 0.71
SEC13-203ENST00000383801 ERBINQ96RT1 1412 aa19.47■□□□□ 0.71
SEC13-203ENST00000383801 CFAP74Q9C0B2 1584 aa19.47■□□□□ 0.71
SEC13-203ENST00000383801 RPRD2Q5VT52 1461 aaKnown RBP19.47■□□□□ 0.71
SEC13-203ENST00000383801 NUP155O75694 1391 aa19.45■□□□□ 0.7
SEC13-203ENST00000383801 UNC13BO14795 1591 aa19.43■□□□□ 0.7
SEC13-203ENST00000383801 TRAPPC8Q9Y2L5 1435 aa19.42■□□□□ 0.7
SEC13-203ENST00000383801 SPAG9O60271 1321 aaKnown RBP19.41■□□□□ 0.7
SEC13-203ENST00000383801 CD109Q6YHK3 1445 aa19.41■□□□□ 0.7
SEC13-203ENST00000383801 ADGRL1O94910 1474 aa19.4■□□□□ 0.7
SEC13-203ENST00000383801 RIMBP3CA6NJZ7 1639 aa19.4■□□□□ 0.7
SEC13-203ENST00000383801 RIMBP3BA6NNM3 1639 aa19.4■□□□□ 0.7
SEC13-203ENST00000383801 RIMBP3Q9UFD9 1639 aa19.4■□□□□ 0.7
SEC13-203ENST00000383801 PKD2Q13563 968 aa19.39■□□□□ 0.69
SEC13-203ENST00000383801 MAGI2Q86UL8 1455 aa19.38■□□□□ 0.69
SEC13-203ENST00000383801 SCAPERQ9BY12 1400 aa19.38■□□□□ 0.69
SEC13-203ENST00000383801 ZFYVE16Q7Z3T8 1539 aa19.37■□□□□ 0.69
SEC13-203ENST00000383801 FAM135AQ9P2D6 1515 aa19.37■□□□□ 0.69
SEC13-203ENST00000383801 NEO1Q92859 1461 aa19.37■□□□□ 0.69
SEC13-203ENST00000383801 GLI2P10070 1586 aa19.36■□□□□ 0.69
SEC13-203ENST00000383801 IQGAP3Q86VI3 1631 aa19.36■□□□□ 0.69
SEC13-203ENST00000383801 INO80Q9ULG1 1556 aaPredicted RBP19.36■□□□□ 0.69
SEC13-203ENST00000383801 ZNF518AQ6AHZ1 1483 aa19.35■□□□□ 0.69
SEC13-203ENST00000383801 ATP7AQ04656 1500 aa19.34■□□□□ 0.69
SEC13-203ENST00000383801 AFAP1Q8N556 730 aa19.34■□□□□ 0.69
SEC13-203ENST00000383801 FOXD1Q16676 465 aa19.33■□□□□ 0.68
SEC13-203ENST00000383801 CYB5RLQ6IPT4 315 aa19.32■□□□□ 0.68
SEC13-203ENST00000383801 L3MBTL2Q969R5 705 aa19.32■□□□□ 0.68
SEC13-203ENST00000383801 EIF2AK4Q9P2K8 1649 aaKnown RBP19.32■□□□□ 0.68
SEC13-203ENST00000383801 TEX14Q8IWB6 1497 aa19.32■□□□□ 0.68
SEC13-203ENST00000383801 ATP10AO60312 1499 aa19.3■□□□□ 0.68
SEC13-203ENST00000383801 DHX29Q7Z478 1369 aaKnown RBP19.29■□□□□ 0.68
SEC13-203ENST00000383801 KDM5CP41229 1560 aa19.29■□□□□ 0.68
SEC13-203ENST00000383801 MLH3Q9UHC1 1453 aa19.29■□□□□ 0.68
SEC13-203ENST00000383801 DEPDC5O75140 1603 aa19.28■□□□□ 0.68
SEC13-203ENST00000383801 MAP3K4Q9Y6R4 1608 aa19.28■□□□□ 0.68
SEC13-203ENST00000383801 POGZQ7Z3K3 1410 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms