RNA–Protein interactions for RNA: ENST00000383703.3

LRIG1-202, Transcript of leucine rich repeats and immunoglobulin like domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRIG1, Length 5,283 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIG1-202ENST00000383703 CCDC18Q5T9S5 1454 aa29.18■■■□□ 2.26
LRIG1-202ENST00000383703 GOLGA6L22H0YM25 854 aa29.17■■■□□ 2.26
LRIG1-202ENST00000383703 SAFB2Q14151 953 aaKnown RBP eCLIP29.15■■■□□ 2.26
LRIG1-202ENST00000383703 CASC1Q6TDU7 716 aa29.15■■■□□ 2.26
LRIG1-202ENST00000383703 NOP58Q9Y2X3 529 aaKnown RBP29.15■■■□□ 2.26
LRIG1-202ENST00000383703 RALBP1Q15311 655 aa29.13■■■□□ 2.25
LRIG1-202ENST00000383703 CHMP4BQ9H444 224 aaKnown RBP29.13■■■□□ 2.25
LRIG1-202ENST00000383703 HNRNPMP52272 730 aaKnown RBP eCLIP29.13■■■□□ 2.252e-7■■□□□ 14.4
LRIG1-202ENST00000383703 MLECQ14165 292 aa29.13■■■□□ 2.25
LRIG1-202ENST00000383703 FANCD2Q9BXW9 1451 aa29.12■■■□□ 2.25
LRIG1-202ENST00000383703 NCLP19338 710 aaKnown RBP29.11■■■□□ 2.25
LRIG1-202ENST00000383703 HAP1P54257 671 aaPredicted RBP29.08■■■□□ 2.25
LRIG1-202ENST00000383703 LMOD2Q6P5Q4 547 aa29.07■■■□□ 2.24
LRIG1-202ENST00000383703 HDGFP51858 240 aaKnown RBP29.07■■■□□ 2.24
LRIG1-202ENST00000383703 ERICH6BQ5W0A0 696 aa29.05■■■□□ 2.24
LRIG1-202ENST00000383703 JPH4Q96JJ6 628 aa29.05■■■□□ 2.24
LRIG1-202ENST00000383703 STK26Q9P289 416 aa29.05■■■□□ 2.24
LRIG1-202ENST00000383703 RSPH4AQ5TD94 716 aa29.03■■■□□ 2.24
LRIG1-202ENST00000383703 RBM19Q9Y4C8 960 aaKnown RBP29.01■■■□□ 2.24
LRIG1-202ENST00000383703 TRIM44Q96DX7 344 aaPredicted RBP29.01■■■□□ 2.23
LRIG1-202ENST00000383703 RCAN3Q9UKA8 241 aa29.01■■■□□ 2.23
LRIG1-202ENST00000383703 KIF3BO15066 747 aa29■■■□□ 2.23
LRIG1-202ENST00000383703 HDGFL2Q7Z4V5 671 aaPredicted RBP28.96■■■□□ 2.23
LRIG1-202ENST00000383703 SOX12O15370 315 aa28.96■■■□□ 2.23
LRIG1-202ENST00000383703 IGF1RP08069 1367 aa28.95■■■□□ 2.22
LRIG1-202ENST00000383703 SPAG9O60271 1321 aaKnown RBP28.94■■■□□ 2.22
LRIG1-202ENST00000383703 EIF3AQ14152 1382 aaKnown RBP28.94■■■□□ 2.22
LRIG1-202ENST00000383703 FGD5Q6ZNL6 1462 aa28.92■■■□□ 2.22
LRIG1-202ENST00000383703 U2AF1L5P0DN76 240 aaPredicted RBP28.91■■■□□ 2.22
LRIG1-202ENST00000383703 U2AF1Q01081 240 aaKnown RBP eCLIP28.91■■■□□ 2.22
LRIG1-202ENST00000383703 NLRP13Q86W25 1043 aa28.89■■■□□ 2.21
LRIG1-202ENST00000383703 GLIPR1L2Q4G1C9 344 aa28.88■■■□□ 2.21
LRIG1-202ENST00000383703 HSP90AB1P08238 724 aaKnown RBP28.88■■■□□ 2.21
LRIG1-202ENST00000383703 OS9Q13438 667 aaPredicted RBP28.86■■■□□ 2.21
LRIG1-202ENST00000383703 ST20-MTHFSA0A0A6YYL1 179 aa28.81■■■□□ 2.2
LRIG1-202ENST00000383703 IPO8O15397 1037 aaKnown RBP28.81■■■□□ 2.2
LRIG1-202ENST00000383703 CCDC144AA2RUR9 1427 aa28.8■■■□□ 2.2
LRIG1-202ENST00000383703 GAPVD1Q14C86 1478 aa28.8■■■□□ 2.2
LRIG1-202ENST00000383703 TPRNQ4KMQ1 711 aa28.79■■■□□ 2.2
LRIG1-202ENST00000383703 RAD54L2Q9Y4B4 1467 aa28.79■■■□□ 2.2
LRIG1-202ENST00000383703 KIF21BO75037 1637 aa28.79■■■□□ 2.2
LRIG1-202ENST00000383703 HSCBQ8IWL3 235 aa28.78■■■□□ 2.2
LRIG1-202ENST00000383703 KIF15Q9NS87 1388 aa28.78■■■□□ 2.2
LRIG1-202ENST00000383703 RTF1Q92541 710 aaKnown RBP28.78■■■□□ 2.2
LRIG1-202ENST00000383703 PTMAP06454 111 aaKnown RBP28.77■■■□□ 2.2
LRIG1-202ENST00000383703 GOLGA2Q08379 1002 aa28.76■■■□□ 2.2
LRIG1-202ENST00000383703 TCERG1O14776 1098 aaKnown RBP28.76■■■□□ 2.19
LRIG1-202ENST00000383703 TRHP20396 242 aaPredicted RBP28.75■■■□□ 2.19
LRIG1-202ENST00000383703 WASHC2CQ9Y4E1 1318 aa28.75■■■□□ 2.19
LRIG1-202ENST00000383703 PDE3BQ13370 1112 aa28.75■■■□□ 2.19
LRIG1-202ENST00000383703 PTPRGP23470 1445 aa28.75■■■□□ 2.19
LRIG1-202ENST00000383703 TSHZ2Q9NRE2 1034 aa28.74■■■□□ 2.19
LRIG1-202ENST00000383703 CALD1Q05682 793 aaKnown RBP28.73■■■□□ 2.19
LRIG1-202ENST00000383703 MYBBP1AQ9BQG0 1328 aaKnown RBP28.73■■■□□ 2.19
LRIG1-202ENST00000383703 NCAPD3P42695 1498 aa28.72■■■□□ 2.19
LRIG1-202ENST00000383703 PHLDB1Q86UU1 1377 aa28.72■■■□□ 2.19
LRIG1-202ENST00000383703 ZRSR1Q15695 479 aaKnown RBP28.72■■■□□ 2.19
LRIG1-202ENST00000383703 PRKRIP1Q9H875 184 aaPredicted RBP28.72■■■□□ 2.19
LRIG1-202ENST00000383703 CCDC146Q8IYE0 955 aa28.71■■■□□ 2.19
LRIG1-202ENST00000383703 NUTM2DQ5VT03 806 aaPredicted RBP28.71■■■□□ 2.19
LRIG1-202ENST00000383703 RWDD1Q9H446 243 aaPredicted RBP28.71■■■□□ 2.19
LRIG1-202ENST00000383703 TERF2IPQ9NYB0 399 aa28.71■■■□□ 2.19
LRIG1-202ENST00000383703 FGD6Q6ZV73 1430 aa28.7■■■□□ 2.19
LRIG1-202ENST00000383703 ITPRIPQ8IWB1 547 aa28.7■■■□□ 2.18
LRIG1-202ENST00000383703 KCNJ4P48050 445 aa28.7■■■□□ 2.18
LRIG1-202ENST00000383703 USP47Q96K76 1375 aa28.68■■■□□ 2.18
LRIG1-202ENST00000383703 PANK3Q9H999 370 aa28.68■■■□□ 2.18
LRIG1-202ENST00000383703 MYOM3Q5VTT5 1437 aa28.65■■■□□ 2.18
LRIG1-202ENST00000383703 TRAK1Q9UPV9 953 aa28.65■■■□□ 2.18
LRIG1-202ENST00000383703 SPRYD3Q8NCJ5 442 aa28.64■■■□□ 2.18
LRIG1-202ENST00000383703 LRRC9Q6ZRR7 1453 aa28.64■■■□□ 2.17
LRIG1-202ENST00000383703 FGD1P98174 961 aa28.63■■■□□ 2.17
LRIG1-202ENST00000383703 CFAP44Q96MT7 982 aa28.63■■■□□ 2.17
LRIG1-202ENST00000383703 APBB1O00213 710 aa28.62■■■□□ 2.17
LRIG1-202ENST00000383703 SMC4Q9NTJ3 1288 aa28.61■■■□□ 2.17
LRIG1-202ENST00000383703 CUX1P39880 1505 aa28.61■■■□□ 2.17
LRIG1-202ENST00000383703 PAK3O75914 559 aaPredicted RBP28.61■■■□□ 2.17
LRIG1-202ENST00000383703 PMFBP1Q8TBY8 1022 aa28.61■■■□□ 2.17
LRIG1-202ENST00000383703 MCCP23508 829 aa28.6■■■□□ 2.17
LRIG1-202ENST00000383703 CENPJQ9HC77 1338 aaPredicted RBP28.59■■■□□ 2.17
LRIG1-202ENST00000383703 RTN4Q9NQC3 1192 aaKnown RBP28.58■■■□□ 2.17
LRIG1-202ENST00000383703 UACAQ9BZF9 1416 aa28.57■■■□□ 2.16
LRIG1-202ENST00000383703 DEKP35659 375 aaKnown RBP28.56■■■□□ 2.16
LRIG1-202ENST00000383703 ZNF644Q9H582 1327 aaPredicted RBP28.56■■■□□ 2.16
LRIG1-202ENST00000383703 DNTTIP2Q5QJE6 756 aaKnown RBP28.56■■■□□ 2.16
LRIG1-202ENST00000383703 CLUAP1Q96AJ1 413 aa28.55■■■□□ 2.16
LRIG1-202ENST00000383703 ZBED9Q6R2W3 1325 aa28.55■■■□□ 2.16
LRIG1-202ENST00000383703 CASKIN1Q8WXD9 1431 aa28.54■■■□□ 2.16
LRIG1-202ENST00000383703 PLCB2Q00722 1185 aa28.54■■■□□ 2.16
LRIG1-202ENST00000383703 SYNJ1O43426 1573 aa28.53■■■□□ 2.16
LRIG1-202ENST00000383703 ERICH3Q5RHP9 1530 aa28.53■■■□□ 2.16
LRIG1-202ENST00000383703 NAP1L2Q9ULW6 460 aaPredicted RBP28.51■■■□□ 2.15
LRIG1-202ENST00000383703 CDK11BP21127 795 aaKnown RBP28.51■■■□□ 2.15
LRIG1-202ENST00000383703 ARAP1Q96P48 1450 aa28.51■■■□□ 2.15
LRIG1-202ENST00000383703 TAOK2Q9UL54 1235 aa28.5■■■□□ 2.15
LRIG1-202ENST00000383703 AQRO60306 1485 aaKnown RBP eCLIP28.49■■■□□ 2.15
LRIG1-202ENST00000383703 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.48■■■□□ 2.15
LRIG1-202ENST00000383703 NCOA2Q15596 1464 aa28.48■■■□□ 2.15
LRIG1-202ENST00000383703 IPO9Q96P70 1041 aaKnown RBP28.48■■■□□ 2.15
LRIG1-202ENST00000383703 RRP7AQ9Y3A4 280 aaKnown RBP28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms