RNA–Protein interactions for RNA: ENST00000383698.3

VGLL3-201, Transcript of vestigial like family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VGLL3, Length 2,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3-201ENST00000383698 DNMT1P26358 1616 aaKnown RBP30.19■■■□□ 2.42
VGLL3-201ENST00000383698 CDK11AQ9UQ88 783 aaPredicted RBP30.18■■■□□ 2.42
VGLL3-201ENST00000383698 PRG4Q92954 1404 aaPredicted RBP30.18■■■□□ 2.42
VGLL3-201ENST00000383698 L3MBTL2Q969R5 705 aa30.17■■■□□ 2.42
VGLL3-201ENST00000383698 CEP170Q5SW79 1584 aa30.16■■■□□ 2.42
VGLL3-201ENST00000383698 BCANQ96GW7 911 aa30.15■■■□□ 2.42
VGLL3-201ENST00000383698 ROCK1Q13464 1354 aa30.15■■■□□ 2.42
VGLL3-201ENST00000383698 PLB1Q6P1J6 1458 aa30.15■■■□□ 2.42
VGLL3-201ENST00000383698 WASHC2AQ641Q2 1341 aa30.13■■■□□ 2.41
VGLL3-201ENST00000383698 MAGI1Q96QZ7 1491 aaPredicted RBP30.12■■■□□ 2.41
VGLL3-201ENST00000383698 FKBP8Q14318 412 aa30.1■■■□□ 2.41
VGLL3-201ENST00000383698 EIF4G2P78344 907 aaKnown RBP eCLIP30.09■■■□□ 2.41
VGLL3-201ENST00000383698 SYNJ2O15056 1496 aa30.09■■■□□ 2.41
VGLL3-201ENST00000383698 TROQ12816 1431 aaPredicted RBP30.08■■■□□ 2.41
VGLL3-201ENST00000383698 ZNF777Q9ULD5 760 aaPredicted RBP30.08■■■□□ 2.41
VGLL3-201ENST00000383698 SLC4A1APQ9BWU0 796 aaKnown RBP30.07■■■□□ 2.4
VGLL3-201ENST00000383698 CFDP1Q9UEE9 299 aaPredicted RBP30.07■■■□□ 2.4
VGLL3-201ENST00000383698 ANKRD30BQ9BXX2 1392 aa30.07■■■□□ 2.4
VGLL3-201ENST00000383698 CAMSAP2Q08AD1 1489 aa30.06■■■□□ 2.4
VGLL3-201ENST00000383698 KIF14Q15058 1648 aa30.04■■■□□ 2.4
VGLL3-201ENST00000383698 RPRD2Q5VT52 1461 aaKnown RBP30.02■■■□□ 2.4
VGLL3-201ENST00000383698 NBPF8Q3BBV2 869 aa30.01■■■□□ 2.39
VGLL3-201ENST00000383698 JPH4Q96JJ6 628 aa30■■■□□ 2.39
VGLL3-201ENST00000383698 GPATCH8Q9UKJ3 1502 aaKnown RBP30■■■□□ 2.39
VGLL3-201ENST00000383698 TEX14Q8IWB6 1497 aa29.97■■■□□ 2.39
VGLL3-201ENST00000383698 C11orf95C9JLR9 678 aaPredicted RBP29.97■■■□□ 2.39
VGLL3-201ENST00000383698 CARMIL2Q6F5E8 1435 aa29.97■■■□□ 2.39
VGLL3-201ENST00000383698 ITSN2Q9NZM3 1697 aa29.97■■■□□ 2.39
VGLL3-201ENST00000383698 NCOA1Q15788 1441 aa29.93■■■□□ 2.38
VGLL3-201ENST00000383698 TSHZ2Q9NRE2 1034 aa29.93■■■□□ 2.38
VGLL3-201ENST00000383698 PZPP20742 1482 aa29.93■■■□□ 2.38
VGLL3-201ENST00000383698 NUP160Q12769 1436 aa29.93■■■□□ 2.38
VGLL3-201ENST00000383698 NEFLP07196 543 aa29.93■■■□□ 2.38
VGLL3-201ENST00000383698 HNRNPUQ00839 825 aaKnown RBP eCLIP29.91■■■□□ 2.38
VGLL3-201ENST00000383698 ADCY10Q96PN6 1610 aa29.91■■■□□ 2.38
VGLL3-201ENST00000383698 CNTLNQ9NXG0 1405 aa29.9■■■□□ 2.38
VGLL3-201ENST00000383698 ADGBQ8N7X0 1667 aa29.9■■■□□ 2.38
VGLL3-201ENST00000383698 CCDC7Q96M83 1385 aa29.88■■■□□ 2.37
VGLL3-201ENST00000383698 CROCC2H7BZ55 1655 aa29.85■■■□□ 2.37
VGLL3-201ENST00000383698 PLEKHD1A6NEE1 506 aa29.83■■■□□ 2.37
VGLL3-201ENST00000383698 CCDC184Q52MB2 194 aa29.83■■■□□ 2.37
VGLL3-201ENST00000383698 ADGRL2O95490 1459 aa29.82■■■□□ 2.36
VGLL3-201ENST00000383698 ANKRD30AQ9BXX3 1397 aa29.81■■■□□ 2.36
VGLL3-201ENST00000383698 PKD2Q13563 968 aa29.8■■■□□ 2.36
VGLL3-201ENST00000383698 ZNF326Q5BKZ1 582 aaKnown RBP29.8■■■□□ 2.36
VGLL3-201ENST00000383698 ABCA8O94911 1581 aa29.79■■■□□ 2.36
VGLL3-201ENST00000383698 ATP10BO94823 1461 aa29.79■■■□□ 2.36
VGLL3-201ENST00000383698 KIAA1107Q9UPP5 1409 aa29.78■■■□□ 2.36
VGLL3-201ENST00000383698 CDC42BPAQ5VT25 1732 aa29.78■■■□□ 2.36
VGLL3-201ENST00000383698 KIF7Q2M1P5 1343 aa29.77■■■□□ 2.36
VGLL3-201ENST00000383698 SPATA31E1Q6ZUB1 1445 aa29.77■■■□□ 2.36
VGLL3-201ENST00000383698 ANKRD50Q9ULJ7 1429 aa29.76■■■□□ 2.35
VGLL3-201ENST00000383698 PRKRIP1Q9H875 184 aaPredicted RBP29.75■■■□□ 2.35
VGLL3-201ENST00000383698 ABCC10Q5T3U5 1492 aa29.74■■■□□ 2.35
VGLL3-201ENST00000383698 C9orf84Q5VXU9 1444 aa29.71■■■□□ 2.35
VGLL3-201ENST00000383698 MBD5Q9P267 1494 aa29.69■■■□□ 2.34
VGLL3-201ENST00000383698 FAM9BQ8IZU0 186 aa29.69■■■□□ 2.34
VGLL3-201ENST00000383698 NUP155O75694 1391 aa29.68■■■□□ 2.34
VGLL3-201ENST00000383698 HNRNPMP52272 730 aaKnown RBP eCLIP29.67■■■□□ 2.34
VGLL3-201ENST00000383698 MRS2Q9HD23 443 aa29.67■■■□□ 2.34
VGLL3-201ENST00000383698 POLR3GLQ9BT43 218 aa29.66■■■□□ 2.34
VGLL3-201ENST00000383698 IRX6P78412 446 aaPredicted RBP29.66■■■□□ 2.34
VGLL3-201ENST00000383698 CNGB1Q14028 1251 aaPredicted RBP29.65■■■□□ 2.34
VGLL3-201ENST00000383698 TSPY4P0CV99 314 aa29.64■■■□□ 2.34
VGLL3-201ENST00000383698 TSPY10P0CW01 314 aa29.64■■■□□ 2.34
VGLL3-201ENST00000383698 POLR1AO95602 1720 aaPredicted RBP29.63■■■□□ 2.33
VGLL3-201ENST00000383698 USP47Q96K76 1375 aa29.63■■■□□ 2.33
VGLL3-201ENST00000383698 SHANK2Q9UPX8 1470 aa29.63■■■□□ 2.33
VGLL3-201ENST00000383698 PTPRGP23470 1445 aa29.61■■■□□ 2.33
VGLL3-201ENST00000383698 KIF15Q9NS87 1388 aa29.58■■■□□ 2.33
VGLL3-201ENST00000383698 BCORL1Q5H9F3 1711 aa29.57■■■□□ 2.32
VGLL3-201ENST00000383698 KDM2AQ9Y2K7 1162 aa29.53■■■□□ 2.32
VGLL3-201ENST00000383698 KDM5CP41229 1560 aa29.51■■■□□ 2.32
VGLL3-201ENST00000383698 SAMD9LQ8IVG5 1584 aa29.5■■■□□ 2.31
VGLL3-201ENST00000383698 ARHGEF5Q12774 1597 aa29.48■■■□□ 2.31
VGLL3-201ENST00000383698 DHX29Q7Z478 1369 aaKnown RBP29.48■■■□□ 2.31
VGLL3-201ENST00000383698 KDM5DQ9BY66 1539 aa29.48■■■□□ 2.31
VGLL3-201ENST00000383698 CDC42BPBQ9Y5S2 1711 aa29.48■■■□□ 2.31
VGLL3-201ENST00000383698 MYT1Q01538 1121 aa29.47■■■□□ 2.31
VGLL3-201ENST00000383698 CARD11Q9BXL7 1154 aa29.47■■■□□ 2.31
VGLL3-201ENST00000383698 CCDC141Q6ZP82 1450 aa29.46■■■□□ 2.31
VGLL3-201ENST00000383698 UHRF1BP1Q6BDS2 1440 aa29.45■■■□□ 2.31
VGLL3-201ENST00000383698 RALGAPBQ86X10 1494 aa29.45■■■□□ 2.31
VGLL3-201ENST00000383698 CHD1O14646 1710 aa29.45■■■□□ 2.31
VGLL3-201ENST00000383698 PREX2Q70Z35 1606 aa29.44■■■□□ 2.3
VGLL3-201ENST00000383698 DCAF11Q8TEB1 546 aa29.44■■■□□ 2.3
VGLL3-201ENST00000383698 ZBED9Q6R2W3 1325 aa29.44■■■□□ 2.3
VGLL3-201ENST00000383698 ARHGEF12Q9NZN5 1544 aa29.4■■■□□ 2.3
VGLL3-201ENST00000383698 SYCP2Q9BX26 1530 aa29.39■■■□□ 2.3
VGLL3-201ENST00000383698 RBM19Q9Y4C8 960 aaKnown RBP29.38■■■□□ 2.29
VGLL3-201ENST00000383698 TTC37Q6PGP7 1564 aa29.38■■■□□ 2.29
VGLL3-201ENST00000383698 FAM135AQ9P2D6 1515 aa29.38■■■□□ 2.29
VGLL3-201ENST00000383698 ARHGAP5Q13017 1502 aa29.37■■■□□ 2.29
VGLL3-201ENST00000383698 ST20-MTHFSA0A0A6YYL1 179 aa29.36■■■□□ 2.29
VGLL3-201ENST00000383698 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.35■■■□□ 2.29
VGLL3-201ENST00000383698 ERCC6L2Q5T890 1561 aa29.34■■■□□ 2.29
VGLL3-201ENST00000383698 SENP3-EIF4A1A0A087X0R7 540 aa29.33■■■□□ 2.29
VGLL3-201ENST00000383698 ARID4BQ4LE39 1312 aaPredicted RBP29.33■■■□□ 2.29
VGLL3-201ENST00000383698 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.32■■■□□ 2.28
VGLL3-201ENST00000383698 ROCK2O75116 1388 aaKnown RBP29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms