RNA–Protein interactions for RNA: ENST00000382438.5

NKX3-2-201, Transcript of NK3 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX3-2, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2-201ENST00000382438 RRP9O43818 475 aaKnown RBP27.62■■■□□ 2.01
NKX3-2-201ENST00000382438 L3MBTL2Q969R5 705 aa27.62■■■□□ 2.01
NKX3-2-201ENST00000382438 PLIN1O60240 522 aa27.62■■■□□ 2.01
NKX3-2-201ENST00000382438 MAP3K1Q13233 1512 aa27.61■■■□□ 2.01
NKX3-2-201ENST00000382438 PNNQ9H307 717 aaKnown RBP27.61■■■□□ 2.01
NKX3-2-201ENST00000382438 PNISRQ8TF01 805 aaKnown RBP27.59■■■□□ 2.01
NKX3-2-201ENST00000382438 PTPRKQ15262 1439 aa27.58■■■□□ 2.01
NKX3-2-201ENST00000382438 TMC1Q8TDI8 760 aa27.57■■■□□ 2
NKX3-2-201ENST00000382438 ARID4BQ4LE39 1312 aaPredicted RBP27.54■■■□□ 2
NKX3-2-201ENST00000382438 NBPF8Q3BBV2 869 aa27.53■■■□□ 2
NKX3-2-201ENST00000382438 FOXD1Q16676 465 aa27.52■■■□□ 2
NKX3-2-201ENST00000382438 KIF27Q86VH2 1401 aa27.51■■□□□ 1.99
NKX3-2-201ENST00000382438 HFM1A2PYH4 1435 aa27.5■■□□□ 1.99
NKX3-2-201ENST00000382438 CRBNQ96SW2 442 aa27.49■■□□□ 1.99
NKX3-2-201ENST00000382438 A0A0U1RQG5 324 aaPredicted RBP27.48■■□□□ 1.99
NKX3-2-201ENST00000382438 DHX29Q7Z478 1369 aaKnown RBP27.48■■□□□ 1.99
NKX3-2-201ENST00000382438 RRP7BPQ9NSQ0 103 aa27.47■■□□□ 1.99
NKX3-2-201ENST00000382438 NAIPQ13075 1403 aa27.46■■□□□ 1.99
NKX3-2-201ENST00000382438 PTPN23Q9H3S7 1636 aa27.46■■□□□ 1.99
NKX3-2-201ENST00000382438 L1TD1Q5T7N2 865 aaKnown RBP27.44■■□□□ 1.98
NKX3-2-201ENST00000382438 C8orf34Q49A92 452 aa27.44■■□□□ 1.98
NKX3-2-201ENST00000382438 CDCA7LQ96GN5 454 aa27.43■■□□□ 1.98
NKX3-2-201ENST00000382438 CLCN1P35523 988 aa27.43■■□□□ 1.98
NKX3-2-201ENST00000382438 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.42■■□□□ 1.987e-10■■■■■ 49.4
NKX3-2-201ENST00000382438 CHIC2Q9UKJ5 165 aa27.42■■□□□ 1.98
NKX3-2-201ENST00000382438 FGD6Q6ZV73 1430 aa27.42■■□□□ 1.98
NKX3-2-201ENST00000382438 FAM161AQ3B820 660 aa27.41■■□□□ 1.98
NKX3-2-201ENST00000382438 PANK2Q9BZ23 570 aa27.41■■□□□ 1.98
NKX3-2-201ENST00000382438 XRCC6P12956 609 aaKnown RBP eCLIP27.4■■□□□ 1.981e-9■■■■■ 51.7
NKX3-2-201ENST00000382438 FMN1Q68DA7 1419 aa27.4■■□□□ 1.98
NKX3-2-201ENST00000382438 SLKQ9H2G2 1235 aaPredicted RBP27.39■■□□□ 1.97
NKX3-2-201ENST00000382438 BIVM-ERCC5R4GMW8 1640 aa27.38■■□□□ 1.97
NKX3-2-201ENST00000382438 BICRAQ9NZM4 1560 aa27.37■■□□□ 1.97
NKX3-2-201ENST00000382438 RGS3P49796 1198 aa27.36■■□□□ 1.97
NKX3-2-201ENST00000382438 PCF11O94913 1555 aaKnown RBP27.35■■□□□ 1.97
NKX3-2-201ENST00000382438 C20orf194Q5TEA3 1177 aa27.35■■□□□ 1.97
NKX3-2-201ENST00000382438 RBM10P98175 930 aaKnown RBP27.34■■□□□ 1.97
NKX3-2-201ENST00000382438 DENND4BO75064 1496 aaPredicted RBP27.33■■□□□ 1.97
NKX3-2-201ENST00000382438 GZF1Q9H116 711 aaPredicted RBP27.32■■□□□ 1.96
NKX3-2-201ENST00000382438 SPATA31E1Q6ZUB1 1445 aa27.32■■□□□ 1.96
NKX3-2-201ENST00000382438 CFAP43Q8NDM7 1665 aa27.32■■□□□ 1.96
NKX3-2-201ENST00000382438 MPHOSPH9Q99550 1183 aa27.29■■□□□ 1.96
NKX3-2-201ENST00000382438 GOLGA6L3A6NEY3 463 aa27.28■■□□□ 1.96
NKX3-2-201ENST00000382438 KTN1Q86UP2 1357 aaKnown RBP27.27■■□□□ 1.96
NKX3-2-201ENST00000382438 KDM2BQ8NHM5 1336 aa27.26■■□□□ 1.95
NKX3-2-201ENST00000382438 LRPPRCP42704 1394 aaKnown RBP27.26■■□□□ 1.95
NKX3-2-201ENST00000382438 ABCA5Q8WWZ7 1642 aa27.24■■□□□ 1.95
NKX3-2-201ENST00000382438 FHOD3Q2V2M9 1422 aa27.24■■□□□ 1.95
NKX3-2-201ENST00000382438 ZNF326Q5BKZ1 582 aaKnown RBP27.22■■□□□ 1.95
NKX3-2-201ENST00000382438 ATAD2BQ9ULI0 1458 aa27.22■■□□□ 1.95
NKX3-2-201ENST00000382438 CUX1P39880 1505 aa27.22■■□□□ 1.95
NKX3-2-201ENST00000382438 CENPQQ7L2Z9 268 aaPredicted RBP27.2■■□□□ 1.95
NKX3-2-201ENST00000382438 IGF1RP08069 1367 aa27.19■■□□□ 1.94
NKX3-2-201ENST00000382438 MTUS2Q5JR59 1369 aa27.17■■□□□ 1.94
NKX3-2-201ENST00000382438 PDE3BQ13370 1112 aa27.17■■□□□ 1.94
NKX3-2-201ENST00000382438 ERBB4Q15303 1308 aa27.17■■□□□ 1.94
NKX3-2-201ENST00000382438 PRDM4Q9UKN5 801 aa27.16■■□□□ 1.94
NKX3-2-201ENST00000382438 FSD2A1L4K1 749 aa27.15■■□□□ 1.94
NKX3-2-201ENST00000382438 AAMPQ13685 434 aa27.15■■□□□ 1.94
NKX3-2-201ENST00000382438 PDCL3Q9H2J4 239 aa27.15■■□□□ 1.94
NKX3-2-201ENST00000382438 ESPNB1AK53 854 aa27.13■■□□□ 1.93
NKX3-2-201ENST00000382438 CARMIL1Q5VZK9 1371 aa27.13■■□□□ 1.93
NKX3-2-201ENST00000382438 USP19O94966 1318 aa27.13■■□□□ 1.93
NKX3-2-201ENST00000382438 SEC24BO95487 1268 aa27.12■■□□□ 1.93
NKX3-2-201ENST00000382438 MYBBP1AQ9BQG0 1328 aaKnown RBP27.12■■□□□ 1.93
NKX3-2-201ENST00000382438 SPRYD3Q8NCJ5 442 aa27.12■■□□□ 1.93
NKX3-2-201ENST00000382438 SLC24A1O60721 1099 aa27.11■■□□□ 1.93
NKX3-2-201ENST00000382438 POLR1AO95602 1720 aaPredicted RBP27.1■■□□□ 1.93
NKX3-2-201ENST00000382438 BRD4O60885 1362 aaPredicted RBP27.1■■□□□ 1.93
NKX3-2-201ENST00000382438 USP47Q96K76 1375 aa27.09■■□□□ 1.93
NKX3-2-201ENST00000382438 BCORL1Q5H9F3 1711 aa27.08■■□□□ 1.93
NKX3-2-201ENST00000382438 BECN1Q14457 450 aa27.08■■□□□ 1.93
NKX3-2-201ENST00000382438 KDM6BO15054 1643 aa27.07■■□□□ 1.92
NKX3-2-201ENST00000382438 CALD1Q05682 793 aaKnown RBP27.07■■□□□ 1.92
NKX3-2-201ENST00000382438 MYH16Q9H6N6 1097 aa27.07■■□□□ 1.92
NKX3-2-201ENST00000382438 ANTXR1Q9H6X2 564 aa27.07■■□□□ 1.92
NKX3-2-201ENST00000382438 MYOM3Q5VTT5 1437 aa27.06■■□□□ 1.92
NKX3-2-201ENST00000382438 KIF15Q9NS87 1388 aa27.05■■□□□ 1.92
NKX3-2-201ENST00000382438 FYCO1Q9BQS8 1478 aa27.04■■□□□ 1.92
NKX3-2-201ENST00000382438 TEX14Q8IWB6 1497 aa27.04■■□□□ 1.92
NKX3-2-201ENST00000382438 CASKIN1Q8WXD9 1431 aa27.04■■□□□ 1.92
NKX3-2-201ENST00000382438 TPM2P07951 284 aa27.02■■□□□ 1.92
NKX3-2-201ENST00000382438 FGD1P98174 961 aa27.02■■□□□ 1.92
NKX3-2-201ENST00000382438 MIA2Q96PC5 1412 aa27.02■■□□□ 1.92
NKX3-2-201ENST00000382438 ANKRD30BQ9BXX2 1392 aa27.01■■□□□ 1.92
NKX3-2-201ENST00000382438 RPRD2Q5VT52 1461 aaKnown RBP27.01■■□□□ 1.91
NKX3-2-201ENST00000382438 HECW1Q76N89 1606 aa27.01■■□□□ 1.91
NKX3-2-201ENST00000382438 RALBP1Q15311 655 aa27■■□□□ 1.91
NKX3-2-201ENST00000382438 CENPJQ9HC77 1338 aaPredicted RBP27■■□□□ 1.91
NKX3-2-201ENST00000382438 MRE11P49959 708 aa27■■□□□ 1.91
NKX3-2-201ENST00000382438 KIAA1211Q6ZU35 1233 aa26.99■■□□□ 1.91
NKX3-2-201ENST00000382438 MCM4P33991 863 aa26.99■■□□□ 1.91
NKX3-2-201ENST00000382438 TRIM44Q96DX7 344 aaPredicted RBP26.98■■□□□ 1.91
NKX3-2-201ENST00000382438 GRPEL1Q9HAV7 217 aa26.97■■□□□ 1.91
NKX3-2-201ENST00000382438 TRAK2O60296 914 aa26.97■■□□□ 1.91
NKX3-2-201ENST00000382438 ARID3AQ99856 593 aa26.95■■□□□ 1.9
NKX3-2-201ENST00000382438 NLRP13Q86W25 1043 aa26.94■■□□□ 1.9
NKX3-2-201ENST00000382438 SLC4A1APQ9BWU0 796 aaKnown RBP26.94■■□□□ 1.9
NKX3-2-201ENST00000382438 FGD5Q6ZNL6 1462 aa26.92■■□□□ 1.9
NKX3-2-201ENST00000382438 TBC1D2Q9BYX2 928 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms