RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 KRI1Q8N9T8 703 aaKnown RBP7.41□□□□□ -1.22
RFX3-204ENST00000382004 VPS53Q5VIR6 699 aa7.4□□□□□ -1.23
RFX3-204ENST00000382004 SYAP1Q96A49 352 aaPredicted RBP7.4□□□□□ -1.23
RFX3-204ENST00000382004 SLKQ9H2G2 1235 aaPredicted RBP7.4□□□□□ -1.23
RFX3-204ENST00000382004 TPM3P06753 285 aa7.39□□□□□ -1.23
RFX3-204ENST00000382004 RTF1Q92541 710 aaKnown RBP7.39□□□□□ -1.23
RFX3-204ENST00000382004 PES1O00541 588 aaKnown RBP7.39□□□□□ -1.23
RFX3-204ENST00000382004 PTMSP20962 102 aa7.39□□□□□ -1.23
RFX3-204ENST00000382004 TMX4Q9H1E5 349 aaPredicted RBP7.39□□□□□ -1.23
RFX3-204ENST00000382004 USP35Q9P2H5 1018 aa7.39□□□□□ -1.23
RFX3-204ENST00000382004 CHMP7Q8WUX9 453 aaPredicted RBP7.39□□□□□ -1.23
RFX3-204ENST00000382004 CFAP44Q96MT7 982 aa7.38□□□□□ -1.23
RFX3-204ENST00000382004 GORABQ5T7V8 394 aa7.38□□□□□ -1.23
RFX3-204ENST00000382004 CHMP3Q9Y3E7 222 aa7.38□□□□□ -1.23
RFX3-204ENST00000382004 CCDC34Q96HJ3 373 aa7.38□□□□□ -1.23
RFX3-204ENST00000382004 CCAR2Q8N163 923 aaKnown RBP7.37□□□□□ -1.23
RFX3-204ENST00000382004 NOL8Q76FK4 1167 aaKnown RBP7.37□□□□□ -1.23
RFX3-204ENST00000382004 MARCH6O60337 910 aa7.37□□□□□ -1.23
RFX3-204ENST00000382004 G3V3G9 751 aa7.37□□□□□ -1.23
RFX3-204ENST00000382004 DCAF8Q5TAQ9 597 aa7.37□□□□□ -1.23
RFX3-204ENST00000382004 FOXD4L1Q9NU39 408 aa7.37□□□□□ -1.23
RFX3-204ENST00000382004 TAF7LQ5H9L4 462 aa7.36□□□□□ -1.23
RFX3-204ENST00000382004 GOLGA6L3A6NEY3 463 aa7.36□□□□□ -1.23
RFX3-204ENST00000382004 TRIM6-TRIM34B2RNG4 842 aa7.36□□□□□ -1.23
RFX3-204ENST00000382004 SRPK2P78362 688 aaKnown RBP7.35□□□□□ -1.23
RFX3-204ENST00000382004 TPD52L1Q16890 204 aaPredicted RBP7.35□□□□□ -1.23
RFX3-204ENST00000382004 SAFB2Q14151 953 aaKnown RBP eCLIP7.35□□□□□ -1.23
RFX3-204ENST00000382004 FOXD4L5Q5VV16 416 aaPredicted RBP7.35□□□□□ -1.23
RFX3-204ENST00000382004 FOXD4L4Q8WXT5 416 aaPredicted RBP7.35□□□□□ -1.23
RFX3-204ENST00000382004 CALD1Q05682 793 aaKnown RBP7.35□□□□□ -1.23
RFX3-204ENST00000382004 MFAP1P55081 439 aaKnown RBP7.34□□□□□ -1.23
RFX3-204ENST00000382004 ITPRIPQ8IWB1 547 aa7.34□□□□□ -1.23
RFX3-204ENST00000382004 TOMM22Q9NS69 142 aa7.34□□□□□ -1.23
RFX3-204ENST00000382004 CSPP1Q1MSJ5 1256 aa7.34□□□□□ -1.23
RFX3-204ENST00000382004 PLEKHD1A6NEE1 506 aa7.34□□□□□ -1.23
RFX3-204ENST00000382004 TSR1Q2NL82 804 aaKnown RBP7.34□□□□□ -1.24
RFX3-204ENST00000382004 RRP12Q5JTH9 1297 aaKnown RBP7.34□□□□□ -1.24
RFX3-204ENST00000382004 MORC1Q86VD1 984 aa7.34□□□□□ -1.24
RFX3-204ENST00000382004 GPATCH3Q96I76 525 aa7.34□□□□□ -1.24
RFX3-204ENST00000382004 SF3A1Q15459 793 aaKnown RBP7.33□□□□□ -1.24
RFX3-204ENST00000382004 PAK3O75914 559 aaPredicted RBP7.33□□□□□ -1.24
RFX3-204ENST00000382004 CSB-PGBD3P0DP91 1061 aa7.33□□□□□ -1.24
RFX3-204ENST00000382004 CNKSR2Q8WXI2 1034 aa7.33□□□□□ -1.24
RFX3-204ENST00000382004 HSP90AA2PQ14568 343 aaPredicted RBP7.33□□□□□ -1.24
RFX3-204ENST00000382004 IPO8O15397 1037 aaKnown RBP7.32□□□□□ -1.24
RFX3-204ENST00000382004 ZNF771Q7L3S4 317 aaPredicted RBP7.32□□□□□ -1.24
RFX3-204ENST00000382004 RBM19Q9Y4C8 960 aaKnown RBP7.32□□□□□ -1.24
RFX3-204ENST00000382004 CCDC9Q9Y3X0 531 aaKnown RBP7.32□□□□□ -1.24
RFX3-204ENST00000382004 TMF1P82094 1093 aa7.31□□□□□ -1.24
RFX3-204ENST00000382004 FRAT2O75474 233 aaPredicted RBP7.31□□□□□ -1.24
RFX3-204ENST00000382004 PHF14O94880 888 aa7.31□□□□□ -1.24
RFX3-204ENST00000382004 CCDC70Q6NSX1 233 aa7.31□□□□□ -1.24
RFX3-204ENST00000382004 MLECQ14165 292 aa7.31□□□□□ -1.24
RFX3-204ENST00000382004 CFDP1Q9UEE9 299 aaPredicted RBP7.3□□□□□ -1.24
RFX3-204ENST00000382004 DCAF1Q9Y4B6 1507 aa7.3□□□□□ -1.24
RFX3-204ENST00000382004 ZNF592Q92610 1267 aa7.3□□□□□ -1.24
RFX3-204ENST00000382004 STK26Q9P289 416 aa7.3□□□□□ -1.24
RFX3-204ENST00000382004 RWDD1Q9H446 243 aaPredicted RBP7.3□□□□□ -1.24
RFX3-204ENST00000382004 TPM2P07951 284 aa7.3□□□□□ -1.24
RFX3-204ENST00000382004 GPS2Q13227 327 aa7.3□□□□□ -1.24
RFX3-204ENST00000382004 KIF16BQ96L93 1317 aa7.3□□□□□ -1.24
RFX3-204ENST00000382004 FOXD4L6Q3SYB3 417 aaPredicted RBP7.29□□□□□ -1.24
RFX3-204ENST00000382004 FOXD4L3Q6VB84 417 aaPredicted RBP7.29□□□□□ -1.24
RFX3-204ENST00000382004 PCMTD1Q96MG8 357 aaPredicted RBP7.29□□□□□ -1.24
RFX3-204ENST00000382004 H3BQV1 296 aa7.29□□□□□ -1.24
RFX3-204ENST00000382004 IFFO2Q5TF58 517 aa7.29□□□□□ -1.24
RFX3-204ENST00000382004 GOLGA6L19H0YKK7 550 aa7.29□□□□□ -1.24
RFX3-204ENST00000382004 VSIG10Q8N0Z9 540 aa7.29□□□□□ -1.24
RFX3-204ENST00000382004 SLC4A10Q6U841 1118 aa7.29□□□□□ -1.24
RFX3-204ENST00000382004 TCEAL9Q9UHQ7 104 aa7.29□□□□□ -1.24
RFX3-204ENST00000382004 RSF1Q96T23 1441 aaPredicted RBP7.29□□□□□ -1.24
RFX3-204ENST00000382004 TPM1P09493 284 aa7.28□□□□□ -1.24
RFX3-204ENST00000382004 SIN3AQ96ST3 1273 aa7.28□□□□□ -1.24
RFX3-204ENST00000382004 DCAF11Q8TEB1 546 aa7.28□□□□□ -1.24
RFX3-204ENST00000382004 RAD21O60216 631 aa7.28□□□□□ -1.24
RFX3-204ENST00000382004 STK31Q9BXU1 1019 aa7.27□□□□□ -1.25
RFX3-204ENST00000382004 ZCCHC6Q5VYS8 1495 aaKnown RBP7.27□□□□□ -1.25
RFX3-204ENST00000382004 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.27□□□□□ -1.253e-6■■■■■ 80.1
RFX3-204ENST00000382004 TCERG1O14776 1098 aaKnown RBP7.27□□□□□ -1.25
RFX3-204ENST00000382004 U2AF1L5P0DN76 240 aaPredicted RBP7.27□□□□□ -1.25
RFX3-204ENST00000382004 U2AF1Q01081 240 aaKnown RBP eCLIP7.27□□□□□ -1.25
RFX3-204ENST00000382004 BECN2A8MW95 431 aa7.27□□□□□ -1.25
RFX3-204ENST00000382004 GTF2E1P29083 439 aaPredicted RBP7.27□□□□□ -1.25
RFX3-204ENST00000382004 AKAP17AQ02040 695 aaKnown RBP7.26□□□□□ -1.25
RFX3-204ENST00000382004 HDGFL2Q7Z4V5 671 aaPredicted RBP7.26□□□□□ -1.25
RFX3-204ENST00000382004 FAM184AQ8NB25 1140 aa7.26□□□□□ -1.25
RFX3-204ENST00000382004 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.26□□□□□ -1.25
RFX3-204ENST00000382004 CLIP1P30622 1438 aa7.26□□□□□ -1.25
RFX3-204ENST00000382004 PMFBP1Q8TBY8 1022 aa7.26□□□□□ -1.25
RFX3-204ENST00000382004 KIF3AQ9Y496 699 aa7.26□□□□□ -1.25
RFX3-204ENST00000382004 ST18O60284 1047 aa7.26□□□□□ -1.25
RFX3-204ENST00000382004 HDGFP51858 240 aaKnown RBP7.26□□□□□ -1.25
RFX3-204ENST00000382004 RCAN3Q9UKA8 241 aa7.26□□□□□ -1.25
RFX3-204ENST00000382004 SPAG9O60271 1321 aaKnown RBP7.25□□□□□ -1.25
RFX3-204ENST00000382004 TRHP20396 242 aaPredicted RBP7.25□□□□□ -1.25
RFX3-204ENST00000382004 MCTP1Q6DN14 999 aa7.25□□□□□ -1.25
RFX3-204ENST00000382004 SMC4Q9NTJ3 1288 aa7.25□□□□□ -1.25
RFX3-204ENST00000382004 HMMRO75330 724 aa7.25□□□□□ -1.25
RFX3-204ENST00000382004 TEX35Q5T0J7 233 aa7.25□□□□□ -1.25
RFX3-204ENST00000382004 CTDP1Q9Y5B0 961 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms