RNA–Protein interactions for RNA: ENST00000381346.8

RDH11-201, Transcript of retinol dehydrogenase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDH11, Length 2,588 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-201ENST00000381346 PAK3O75914 559 aaPredicted RBP12.49□□□□□ -0.41
RDH11-201ENST00000381346 SLC24A1O60721 1099 aa12.48□□□□□ -0.41
RDH11-201ENST00000381346 PPP4R2Q9NY27 417 aa12.48□□□□□ -0.41
RDH11-201ENST00000381346 CEP170Q5SW79 1584 aa12.47□□□□□ -0.41
RDH11-201ENST00000381346 C11orf95C9JLR9 678 aaPredicted RBP12.47□□□□□ -0.41
RDH11-201ENST00000381346 CDK13Q14004 1512 aaKnown RBP12.46□□□□□ -0.41
RDH11-201ENST00000381346 PTPN23Q9H3S7 1636 aa12.46□□□□□ -0.41
RDH11-201ENST00000381346 CHMP7Q8WUX9 453 aaPredicted RBP12.46□□□□□ -0.42
RDH11-201ENST00000381346 NUP160Q12769 1436 aa12.45□□□□□ -0.42
RDH11-201ENST00000381346 TCOF1Q13428 1488 aaKnown RBP12.45□□□□□ -0.42
RDH11-201ENST00000381346 HFM1A2PYH4 1435 aa12.44□□□□□ -0.42
RDH11-201ENST00000381346 RAPGEF6Q8TEU7 1601 aa12.44□□□□□ -0.42
RDH11-201ENST00000381346 PTPRKQ15262 1439 aa12.44□□□□□ -0.42
RDH11-201ENST00000381346 DDX10Q13206 875 aaKnown RBP12.43□□□□□ -0.42
RDH11-201ENST00000381346 WASHC2AQ641Q2 1341 aa12.43□□□□□ -0.42
RDH11-201ENST00000381346 IPO9Q96P70 1041 aaKnown RBP12.43□□□□□ -0.42
RDH11-201ENST00000381346 NUP153P49790 1475 aaKnown RBP12.43□□□□□ -0.42
RDH11-201ENST00000381346 RIMBP3CA6NJZ7 1639 aa12.42□□□□□ -0.42
RDH11-201ENST00000381346 RIMBP3BA6NNM3 1639 aa12.42□□□□□ -0.42
RDH11-201ENST00000381346 RIMBP3Q9UFD9 1639 aa12.42□□□□□ -0.42
RDH11-201ENST00000381346 ANP32CO43423 234 aa12.42□□□□□ -0.42
RDH11-201ENST00000381346 ZBTB47Q9UFB7 747 aaPredicted RBP12.42□□□□□ -0.42
RDH11-201ENST00000381346 MIA2Q96PC5 1412 aa12.42□□□□□ -0.42
RDH11-201ENST00000381346 ANP32AP39687 249 aaKnown RBP12.41□□□□□ -0.42
RDH11-201ENST00000381346 USP35Q9P2H5 1018 aa12.4□□□□□ -0.42
RDH11-201ENST00000381346 GLIPR1L2Q4G1C9 344 aa12.4□□□□□ -0.42
RDH11-201ENST00000381346 NAIPQ13075 1403 aa12.39□□□□□ -0.43
RDH11-201ENST00000381346 CARMIL2Q6F5E8 1435 aa12.39□□□□□ -0.43
RDH11-201ENST00000381346 PPP1R15AO75807 674 aaPredicted RBP12.39□□□□□ -0.43
RDH11-201ENST00000381346 IRX6P78412 446 aaPredicted RBP12.39□□□□□ -0.43
RDH11-201ENST00000381346 WASHC2CQ9Y4E1 1318 aa12.39□□□□□ -0.43
RDH11-201ENST00000381346 FBLN2P98095 1184 aa12.38□□□□□ -0.43
RDH11-201ENST00000381346 RSPH6AQ9H0K4 717 aa12.38□□□□□ -0.43
RDH11-201ENST00000381346 DAXXQ9UER7 740 aaPredicted RBP12.38□□□□□ -0.43
RDH11-201ENST00000381346 AKNAQ7Z591 1439 aa12.38□□□□□ -0.43
RDH11-201ENST00000381346 UACAQ9BZF9 1416 aa12.37□□□□□ -0.43
RDH11-201ENST00000381346 JPH4Q96JJ6 628 aa12.37□□□□□ -0.43
RDH11-201ENST00000381346 TIMELESSQ9UNS1 1208 aa12.37□□□□□ -0.43
RDH11-201ENST00000381346 GCC2Q8IWJ2 1684 aa12.36□□□□□ -0.43
RDH11-201ENST00000381346 ARID3CA6NKF2 412 aa12.35□□□□□ -0.43
RDH11-201ENST00000381346 PLB1Q6P1J6 1458 aa12.34□□□□□ -0.43
RDH11-201ENST00000381346 TROQ12816 1431 aaPredicted RBP12.34□□□□□ -0.43
RDH11-201ENST00000381346 OSCARQ8IYS5 282 aa12.32□□□□□ -0.44
RDH11-201ENST00000381346 SIN3AQ96ST3 1273 aa12.32□□□□□ -0.44
RDH11-201ENST00000381346 ADCY10Q96PN6 1610 aa12.32□□□□□ -0.44
RDH11-201ENST00000381346 PODXL2Q9NZ53 605 aa12.32□□□□□ -0.44
RDH11-201ENST00000381346 ABCA8O94911 1581 aa12.31□□□□□ -0.44
RDH11-201ENST00000381346 B4GALNT3Q6L9W6 998 aa12.3□□□□□ -0.44
RDH11-201ENST00000381346 DNMT1P26358 1616 aaKnown RBP12.3□□□□□ -0.44
RDH11-201ENST00000381346 HNRNPUQ00839 825 aaKnown RBP eCLIP12.3□□□□□ -0.44
RDH11-201ENST00000381346 PRG4Q92954 1404 aaPredicted RBP12.3□□□□□ -0.44
RDH11-201ENST00000381346 ITSN2Q9NZM3 1697 aa12.3□□□□□ -0.44
RDH11-201ENST00000381346 NEFMP07197 916 aa12.29□□□□□ -0.44
RDH11-201ENST00000381346 DAPK1P53355 1430 aa12.29□□□□□ -0.44
RDH11-201ENST00000381346 ROCK1Q13464 1354 aa12.29□□□□□ -0.44
RDH11-201ENST00000381346 RRP7BPQ9NSQ0 103 aa12.28□□□□□ -0.44
RDH11-201ENST00000381346 CHD1O14646 1710 aa12.28□□□□□ -0.44
RDH11-201ENST00000381346 CHIC2Q9UKJ5 165 aa12.27□□□□□ -0.44
RDH11-201ENST00000381346 PPM1GO15355 546 aaPredicted RBP12.27□□□□□ -0.45
RDH11-201ENST00000381346 BRPF3Q9ULD4 1205 aa12.27□□□□□ -0.45
RDH11-201ENST00000381346 ABCC5O15440 1437 aa12.27□□□□□ -0.45
RDH11-201ENST00000381346 KIF14Q15058 1648 aa12.26□□□□□ -0.45
RDH11-201ENST00000381346 PLEKHG5O94827 1062 aa12.26□□□□□ -0.45
RDH11-201ENST00000381346 GPATCH8Q9UKJ3 1502 aaKnown RBP12.26□□□□□ -0.45
RDH11-201ENST00000381346 KDM6BO15054 1643 aa12.26□□□□□ -0.45
RDH11-201ENST00000381346 ZMYND15Q9H091 742 aa12.25□□□□□ -0.45
RDH11-201ENST00000381346 ATP10BO94823 1461 aa12.24□□□□□ -0.45
RDH11-201ENST00000381346 CAMSAP2Q08AD1 1489 aa12.24□□□□□ -0.45
RDH11-201ENST00000381346 SHROOM2Q13796 1616 aa12.24□□□□□ -0.45
RDH11-201ENST00000381346 TONSLQ96HA7 1378 aa12.24□□□□□ -0.45
RDH11-201ENST00000381346 ZNF644Q9H582 1327 aaPredicted RBP12.23□□□□□ -0.45
RDH11-201ENST00000381346 GSE1Q14687 1217 aa12.23□□□□□ -0.45
RDH11-201ENST00000381346 DENND4BO75064 1496 aaPredicted RBP12.23□□□□□ -0.45
RDH11-201ENST00000381346 FAM43AQ8N2R8 423 aa12.23□□□□□ -0.45
RDH11-201ENST00000381346 CFDP1Q9UEE9 299 aaPredicted RBP12.23□□□□□ -0.45
RDH11-201ENST00000381346 PTPRGP23470 1445 aa12.22□□□□□ -0.45
RDH11-201ENST00000381346 PLEKHD1A6NEE1 506 aa12.22□□□□□ -0.45
RDH11-201ENST00000381346 VSIG10Q8N0Z9 540 aa12.22□□□□□ -0.45
RDH11-201ENST00000381346 CDC42BPAQ5VT25 1732 aa12.21□□□□□ -0.45
RDH11-201ENST00000381346 ABCC10Q5T3U5 1492 aa12.21□□□□□ -0.45
RDH11-201ENST00000381346 ADGBQ8N7X0 1667 aa12.21□□□□□ -0.46
RDH11-201ENST00000381346 CROCC2H7BZ55 1655 aa12.2□□□□□ -0.46
RDH11-201ENST00000381346 ADGRL2O95490 1459 aa12.19□□□□□ -0.46
RDH11-201ENST00000381346 KDM5BQ9UGL1 1544 aa12.19□□□□□ -0.46
RDH11-201ENST00000381346 MPHOSPH9Q99550 1183 aa12.18□□□□□ -0.46
RDH11-201ENST00000381346 LAS1LQ9Y4W2 734 aaKnown RBP12.18□□□□□ -0.46
RDH11-201ENST00000381346 NCOA1Q15788 1441 aa12.17□□□□□ -0.46
RDH11-201ENST00000381346 SHANK2Q9UPX8 1470 aa12.16□□□□□ -0.46
RDH11-201ENST00000381346 ZNF777Q9ULD5 760 aaPredicted RBP12.14□□□□□ -0.47
RDH11-201ENST00000381346 ANKRD30AQ9BXX3 1397 aa12.13□□□□□ -0.47
RDH11-201ENST00000381346 CLASP1Q7Z460 1538 aa12.13□□□□□ -0.47
RDH11-201ENST00000381346 ANKRD30BQ9BXX2 1392 aa12.13□□□□□ -0.47
RDH11-201ENST00000381346 ARHGEF5Q12774 1597 aa12.12□□□□□ -0.47
RDH11-201ENST00000381346 ERCC6L2Q5T890 1561 aa12.12□□□□□ -0.47
RDH11-201ENST00000381346 ABCC2Q92887 1545 aa12.12□□□□□ -0.47
RDH11-201ENST00000381346 PREX2Q70Z35 1606 aa12.12□□□□□ -0.47
RDH11-201ENST00000381346 PZPP20742 1482 aa12.11□□□□□ -0.47
RDH11-201ENST00000381346 HIRIP3Q9BW71 556 aaPredicted RBP12.11□□□□□ -0.47
RDH11-201ENST00000381346 RPRD2Q5VT52 1461 aaKnown RBP12.11□□□□□ -0.47
RDH11-201ENST00000381346 CDC42BPBQ9Y5S2 1711 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms