RNA–Protein interactions for RNA: ENST00000380853.1

TTC39B-203, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 1,326 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-203ENST00000380853 COLQQ9Y215 455 aaPredicted RBP12.04□□□□□ -0.48
TTC39B-203ENST00000380853 ABCA5Q8WWZ7 1642 aa12.03□□□□□ -0.48
TTC39B-203ENST00000380853 FAM163AQ96GL9 167 aaPredicted RBP12.03□□□□□ -0.48
TTC39B-203ENST00000380853 CLASP1Q7Z460 1538 aa12.03□□□□□ -0.48
TTC39B-203ENST00000380853 ABCA10Q8WWZ4 1543 aa12.03□□□□□ -0.48
TTC39B-203ENST00000380853 BIVM-ERCC5R4GMW8 1640 aa12□□□□□ -0.49
TTC39B-203ENST00000380853 NUBP1P53384 320 aa12□□□□□ -0.49
TTC39B-203ENST00000380853 PCDHB13Q9Y5F0 798 aa12□□□□□ -0.49
TTC39B-203ENST00000380853 WRNQ14191 1432 aaPredicted RBP eCLIP11.99□□□□□ -0.49
TTC39B-203ENST00000380853 SEC24BO95487 1268 aa11.99□□□□□ -0.49
TTC39B-203ENST00000380853 TRIM35Q9UPQ4 493 aa11.99□□□□□ -0.49
TTC39B-203ENST00000380853 TOP2BQ02880 1626 aa11.99□□□□□ -0.49
TTC39B-203ENST00000380853 ADAMTS12P58397 1594 aa11.97□□□□□ -0.49
TTC39B-203ENST00000380853 IFNL1Q8IU54 200 aa11.95□□□□□ -0.5
TTC39B-203ENST00000380853 SGIP1Q9BQI5 828 aa11.95□□□□□ -0.5
TTC39B-203ENST00000380853 PCDH10Q9P2E7 1040 aa11.95□□□□□ -0.5
TTC39B-203ENST00000380853 ZBTB47Q9UFB7 747 aaPredicted RBP11.95□□□□□ -0.5
TTC39B-203ENST00000380853 GRIN2AQ12879 1464 aa11.94□□□□□ -0.5
TTC39B-203ENST00000380853 IER5LQ5T953 404 aa11.91□□□□□ -0.5
TTC39B-203ENST00000380853 FKBP8Q14318 412 aa11.9□□□□□ -0.5
TTC39B-203ENST00000380853 FAM212AQ96EL1 285 aa11.9□□□□□ -0.5
TTC39B-203ENST00000380853 ERICH3Q5RHP9 1530 aa11.9□□□□□ -0.5
TTC39B-203ENST00000380853 FHAD1B1AJZ9 1412 aa11.89□□□□□ -0.51
TTC39B-203ENST00000380853 CEP170Q5SW79 1584 aa11.89□□□□□ -0.51
TTC39B-203ENST00000380853 TMEM106CQ9BVX2 250 aa11.88□□□□□ -0.51
TTC39B-203ENST00000380853 NUP160Q12769 1436 aa11.86□□□□□ -0.51
TTC39B-203ENST00000380853 ERCC6L2Q5T890 1561 aa11.83□□□□□ -0.52
TTC39B-203ENST00000380853 SHROOM2Q13796 1616 aa11.82□□□□□ -0.52
TTC39B-203ENST00000380853 SLAIN1Q8ND83 568 aa11.82□□□□□ -0.52
TTC39B-203ENST00000380853 PYGBP11216 843 aa11.8□□□□□ -0.52
TTC39B-203ENST00000380853 PLCG2P16885 1265 aa11.8□□□□□ -0.52
TTC39B-203ENST00000380853 RUSC2Q8N2Y8 1516 aa11.79□□□□□ -0.52
TTC39B-203ENST00000380853 IRX5P78411 483 aaPredicted RBP11.79□□□□□ -0.52
TTC39B-203ENST00000380853 CUL7Q14999 1698 aa11.78□□□□□ -0.52
TTC39B-203ENST00000380853 DCAF8Q5TAQ9 597 aa11.78□□□□□ -0.52
TTC39B-203ENST00000380853 KIF27Q86VH2 1401 aa11.77□□□□□ -0.53
TTC39B-203ENST00000380853 PRG4Q92954 1404 aaPredicted RBP11.76□□□□□ -0.53
TTC39B-203ENST00000380853 CDAN1Q8IWY9 1227 aa11.75□□□□□ -0.53
TTC39B-203ENST00000380853 ST18O60284 1047 aa11.74□□□□□ -0.53
TTC39B-203ENST00000380853 PCDHB8Q9UN66 801 aa11.74□□□□□ -0.53
TTC39B-203ENST00000380853 JPH4Q96JJ6 628 aa11.71□□□□□ -0.53
TTC39B-203ENST00000380853 OCEL1Q9H607 264 aa11.69□□□□□ -0.54
TTC39B-203ENST00000380853 KIAA0586Q9BVV6 1533 aa11.69□□□□□ -0.54
TTC39B-203ENST00000380853 IGF1RP08069 1367 aa11.67□□□□□ -0.54
TTC39B-203ENST00000380853 CARMIL1Q5VZK9 1371 aa11.65□□□□□ -0.54
TTC39B-203ENST00000380853 FBXO3Q9UK99 471 aa11.65□□□□□ -0.54
TTC39B-203ENST00000380853 KIF13AQ9H1H9 1805 aa11.65□□□□□ -0.54
TTC39B-203ENST00000380853 ADCY10Q96PN6 1610 aa11.63□□□□□ -0.55
TTC39B-203ENST00000380853 IQGAP2Q13576 1575 aa11.63□□□□□ -0.55
TTC39B-203ENST00000380853 MAPKBP1O60336 1514 aa11.62□□□□□ -0.55
TTC39B-203ENST00000380853 CARMIL2Q6F5E8 1435 aa11.61□□□□□ -0.55
TTC39B-203ENST00000380853 TTBK1Q5TCY1 1321 aaPredicted RBP11.61□□□□□ -0.55
TTC39B-203ENST00000380853 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.6□□□□□ -0.55
TTC39B-203ENST00000380853 KLHL34Q8N239 644 aa11.6□□□□□ -0.55
TTC39B-203ENST00000380853 DIP2BQ9P265 1576 aa11.59□□□□□ -0.55
TTC39B-203ENST00000380853 ABCC10Q5T3U5 1492 aa11.59□□□□□ -0.55
TTC39B-203ENST00000380853 PDCD7Q8N8D1 485 aaKnown RBP11.59□□□□□ -0.55
TTC39B-203ENST00000380853 PTPRGP23470 1445 aa11.58□□□□□ -0.56
TTC39B-203ENST00000380853 VASPP50552 380 aaPredicted RBP11.58□□□□□ -0.56
TTC39B-203ENST00000380853 FAM69CQ0P6D2 419 aa11.58□□□□□ -0.56
TTC39B-203ENST00000380853 TNIKQ9UKE5 1360 aa11.57□□□□□ -0.56
TTC39B-203ENST00000380853 RAPGEF2Q9Y4G8 1499 aa11.57□□□□□ -0.56
TTC39B-203ENST00000380853 GSE1Q14687 1217 aa11.56□□□□□ -0.56
TTC39B-203ENST00000380853 ZNF467Q7Z7K2 595 aaPredicted RBP11.56□□□□□ -0.56
TTC39B-203ENST00000380853 MARVELD3Q96A59 401 aa11.56□□□□□ -0.56
TTC39B-203ENST00000380853 TMEM121BQ9BXQ6 578 aaPredicted RBP11.55□□□□□ -0.56
TTC39B-203ENST00000380853 CTTNBP2Q8WZ74 1663 aa11.54□□□□□ -0.56
TTC39B-203ENST00000380853 TSPOAP1O95153 1857 aa11.54□□□□□ -0.56
TTC39B-203ENST00000380853 GOLGA2Q08379 1002 aa11.54□□□□□ -0.56
TTC39B-203ENST00000380853 ABCC2Q92887 1545 aa11.53□□□□□ -0.56
TTC39B-203ENST00000380853 SNPHO15079 494 aa11.53□□□□□ -0.56
TTC39B-203ENST00000380853 MKRN3Q13064 507 aaKnown RBP11.53□□□□□ -0.56
TTC39B-203ENST00000380853 KDM6BO15054 1643 aa11.52□□□□□ -0.57
TTC39B-203ENST00000380853 KIAA0556O60303 1618 aa11.52□□□□□ -0.57
TTC39B-203ENST00000380853 UGGT2Q9NYU1 1516 aa11.51□□□□□ -0.57
TTC39B-203ENST00000380853 C3orf67Q6ZVT6 689 aa11.51□□□□□ -0.57
TTC39B-203ENST00000380853 DISP1Q96F81 1524 aa11.5□□□□□ -0.57
TTC39B-203ENST00000380853 UACAQ9BZF9 1416 aa11.5□□□□□ -0.57
TTC39B-203ENST00000380853 PSEN1P49768 467 aa11.49□□□□□ -0.57
TTC39B-203ENST00000380853 UHRF1BP1LA0JNW5 1464 aa11.49□□□□□ -0.57
TTC39B-203ENST00000380853 PLB1Q6P1J6 1458 aa11.49□□□□□ -0.57
TTC39B-203ENST00000380853 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.48□□□□□ -0.573e-7■■□□□ 11.9
TTC39B-203ENST00000380853 ASXL2Q76L83 1435 aa11.48□□□□□ -0.57
TTC39B-203ENST00000380853 GOLGA3Q08378 1498 aa11.47□□□□□ -0.57
TTC39B-203ENST00000380853 CHRM1P11229 460 aaPredicted RBP11.47□□□□□ -0.57
TTC39B-203ENST00000380853 MMRN1Q13201 1228 aa11.47□□□□□ -0.57
TTC39B-203ENST00000380853 SPNS2Q8IVW8 549 aa11.47□□□□□ -0.57
TTC39B-203ENST00000380853 ZCCHC11Q5TAX3 1644 aaKnown RBP11.46□□□□□ -0.57
TTC39B-203ENST00000380853 L3MBTL3Q96JM7 780 aaPredicted RBP11.46□□□□□ -0.57
TTC39B-203ENST00000380853 GLI2P10070 1586 aa11.44□□□□□ -0.58
TTC39B-203ENST00000380853 KDM5BQ9UGL1 1544 aa11.43□□□□□ -0.58
TTC39B-203ENST00000380853 EMP3P54852 163 aa11.42□□□□□ -0.58
TTC39B-203ENST00000380853 DPY19L2Q6NUT2 758 aa11.41□□□□□ -0.58
TTC39B-203ENST00000380853 PRXQ9BXM0 1461 aa11.41□□□□□ -0.58
TTC39B-203ENST00000380853 PPRC1Q5VV67 1664 aaKnown RBP11.41□□□□□ -0.58
TTC39B-203ENST00000380853 TEX14Q8IWB6 1497 aa11.4□□□□□ -0.58
TTC39B-203ENST00000380853 PDAP1Q13442 181 aaKnown RBP11.4□□□□□ -0.58
TTC39B-203ENST00000380853 FAM9AQ8IZU1 332 aaPredicted RBP11.4□□□□□ -0.58
TTC39B-203ENST00000380853 MAP3K4Q9Y6R4 1608 aa11.4□□□□□ -0.58
TTC39B-203ENST00000380853 EPRSP07814 1512 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms