RNA–Protein interactions for RNA: ENST00000380850.8

TTC39B-202, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-202ENST00000380850 CUL7Q14999 1698 aa17.54■□□□□ 0.4
TTC39B-202ENST00000380850 CTTNBP2Q8WZ74 1663 aa17.53■□□□□ 0.4
TTC39B-202ENST00000380850 NUP155O75694 1391 aa17.52■□□□□ 0.4
TTC39B-202ENST00000380850 CFAP43Q8NDM7 1665 aa17.51■□□□□ 0.39
TTC39B-202ENST00000380850 PTPN23Q9H3S7 1636 aa17.51■□□□□ 0.39
TTC39B-202ENST00000380850 IQGAP2Q13576 1575 aa17.51■□□□□ 0.39
TTC39B-202ENST00000380850 CARD11Q9BXL7 1154 aa17.5■□□□□ 0.39
TTC39B-202ENST00000380850 MAP3K1Q13233 1512 aa17.5■□□□□ 0.39
TTC39B-202ENST00000380850 ABCA5Q8WWZ7 1642 aa17.5■□□□□ 0.39
TTC39B-202ENST00000380850 B4GALNT3Q6L9W6 998 aa17.48■□□□□ 0.39
TTC39B-202ENST00000380850 LRRIQ1Q96JM4 1722 aa17.47■□□□□ 0.39
TTC39B-202ENST00000380850 ABCC5O15440 1437 aa17.46■□□□□ 0.39
TTC39B-202ENST00000380850 TARBP1Q13395 1621 aaKnown RBP17.45■□□□□ 0.38
TTC39B-202ENST00000380850 SUPT6HQ7KZ85 1726 aaKnown RBP17.45■□□□□ 0.38
TTC39B-202ENST00000380850 TIMELESSQ9UNS1 1208 aa17.45■□□□□ 0.38
TTC39B-202ENST00000380850 KIF7Q2M1P5 1343 aa17.45■□□□□ 0.38
TTC39B-202ENST00000380850 EHBP1L1Q8N3D4 1523 aa17.44■□□□□ 0.38
TTC39B-202ENST00000380850 ST20-MTHFSA0A0A6YYL1 179 aa17.43■□□□□ 0.38
TTC39B-202ENST00000380850 NUP153P49790 1475 aaKnown RBP17.43■□□□□ 0.38
TTC39B-202ENST00000380850 DAPK1P53355 1430 aa17.43■□□□□ 0.38
TTC39B-202ENST00000380850 UGGT2Q9NYU1 1516 aa17.42■□□□□ 0.38
TTC39B-202ENST00000380850 PRKRIP1Q9H875 184 aaPredicted RBP17.42■□□□□ 0.38
TTC39B-202ENST00000380850 GRIN2AQ12879 1464 aa17.41■□□□□ 0.38
TTC39B-202ENST00000380850 CC2D1BQ5T0F9 858 aaKnown RBP17.41■□□□□ 0.38
TTC39B-202ENST00000380850 CHGAP10645 457 aaKnown RBP17.4■□□□□ 0.38
TTC39B-202ENST00000380850 ARHGEF11O15085 1522 aa17.4■□□□□ 0.38
TTC39B-202ENST00000380850 NBPF1Q3BBV0 1214 aa17.4■□□□□ 0.38
TTC39B-202ENST00000380850 CCER2I3L3R5 266 aa17.39■□□□□ 0.37
TTC39B-202ENST00000380850 DISP1Q96F81 1524 aa17.39■□□□□ 0.37
TTC39B-202ENST00000380850 IFT140Q96RY7 1462 aa17.39■□□□□ 0.37
TTC39B-202ENST00000380850 TMC1Q8TDI8 760 aa17.38■□□□□ 0.37
TTC39B-202ENST00000380850 SAMD9Q5K651 1589 aa17.38■□□□□ 0.37
TTC39B-202ENST00000380850 DENND4BO75064 1496 aaPredicted RBP17.37■□□□□ 0.37
TTC39B-202ENST00000380850 KIAA0586Q9BVV6 1533 aa17.37■□□□□ 0.37
TTC39B-202ENST00000380850 ADAMTS12P58397 1594 aa17.37■□□□□ 0.37
TTC39B-202ENST00000380850 PTPRGP23470 1445 aa17.36■□□□□ 0.37
TTC39B-202ENST00000380850 HECW1Q76N89 1606 aa17.36■□□□□ 0.37
TTC39B-202ENST00000380850 CARMIL2Q6F5E8 1435 aa17.35■□□□□ 0.37
TTC39B-202ENST00000380850 CCDC7Q96M83 1385 aa17.35■□□□□ 0.37
TTC39B-202ENST00000380850 ANKRD30BQ9BXX2 1392 aa17.34■□□□□ 0.37
TTC39B-202ENST00000380850 PBRM1Q86U86 1689 aa17.34■□□□□ 0.37
TTC39B-202ENST00000380850 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.33■□□□□ 0.36
TTC39B-202ENST00000380850 AFAP1Q8N556 730 aa17.33■□□□□ 0.36
TTC39B-202ENST00000380850 NUTM2DQ5VT03 806 aaPredicted RBP17.32■□□□□ 0.36
TTC39B-202ENST00000380850 WDR62O43379 1518 aa17.32■□□□□ 0.36
TTC39B-202ENST00000380850 ANKRD30AQ9BXX3 1397 aa17.32■□□□□ 0.36
TTC39B-202ENST00000380850 USP47Q96K76 1375 aa17.31■□□□□ 0.36
TTC39B-202ENST00000380850 TROQ12816 1431 aaPredicted RBP17.31■□□□□ 0.36
TTC39B-202ENST00000380850 ANKRD50Q9ULJ7 1429 aa17.31■□□□□ 0.36
TTC39B-202ENST00000380850 EIF4G3O43432 1585 aaKnown RBP17.3■□□□□ 0.36
TTC39B-202ENST00000380850 CAMSAP2Q08AD1 1489 aa17.3■□□□□ 0.36
TTC39B-202ENST00000380850 KIF15Q9NS87 1388 aa17.29■□□□□ 0.36
TTC39B-202ENST00000380850 RBM19Q9Y4C8 960 aaKnown RBP17.29■□□□□ 0.36
TTC39B-202ENST00000380850 KIF14Q15058 1648 aa17.28■□□□□ 0.36
TTC39B-202ENST00000380850 GPATCH8Q9UKJ3 1502 aaKnown RBP17.27■□□□□ 0.36
TTC39B-202ENST00000380850 NCOA1Q15788 1441 aa17.27■□□□□ 0.35
TTC39B-202ENST00000380850 MIA2Q96PC5 1412 aa17.25■□□□□ 0.35
TTC39B-202ENST00000380850 KIAA0556O60303 1618 aa17.25■□□□□ 0.35
TTC39B-202ENST00000380850 TNNT2P45379 298 aaPredicted RBP17.24■□□□□ 0.35
TTC39B-202ENST00000380850 CEP170Q5SW79 1584 aa17.23■□□□□ 0.35
TTC39B-202ENST00000380850 ROCK2O75116 1388 aaKnown RBP17.23■□□□□ 0.35
TTC39B-202ENST00000380850 ATP10BO94823 1461 aa17.23■□□□□ 0.35
TTC39B-202ENST00000380850 SYNJ2O15056 1496 aa17.22■□□□□ 0.35
TTC39B-202ENST00000380850 C9orf84Q5VXU9 1444 aa17.22■□□□□ 0.35
TTC39B-202ENST00000380850 CNTLNQ9NXG0 1405 aa17.22■□□□□ 0.35
TTC39B-202ENST00000380850 SKAP1Q86WV1 359 aa17.2■□□□□ 0.34
TTC39B-202ENST00000380850 AKNAQ7Z591 1439 aa17.2■□□□□ 0.34
TTC39B-202ENST00000380850 NPM2Q86SE8 214 aaKnown RBP17.2■□□□□ 0.34
TTC39B-202ENST00000380850 RAPGEF6Q8TEU7 1601 aa17.2■□□□□ 0.34
TTC39B-202ENST00000380850 SAFB2Q14151 953 aaKnown RBP eCLIP17.19■□□□□ 0.34
TTC39B-202ENST00000380850 ERICH6Q7L0X2 663 aa17.19■□□□□ 0.34
TTC39B-202ENST00000380850 PLPPR3Q6T4P5 718 aa17.18■□□□□ 0.34
TTC39B-202ENST00000380850 KDM5BQ9UGL1 1544 aa17.18■□□□□ 0.34
TTC39B-202ENST00000380850 PLIN1O60240 522 aa17.18■□□□□ 0.34
TTC39B-202ENST00000380850 KIF3BO15066 747 aa17.17■□□□□ 0.34
TTC39B-202ENST00000380850 TCOF1Q13428 1488 aaKnown RBP17.17■□□□□ 0.34
TTC39B-202ENST00000380850 PZPP20742 1482 aa17.16■□□□□ 0.34
TTC39B-202ENST00000380850 RPRD2Q5VT52 1461 aaKnown RBP17.16■□□□□ 0.34
TTC39B-202ENST00000380850 GGT6Q6P531 493 aa17.16■□□□□ 0.34
TTC39B-202ENST00000380850 KIAA1107Q9UPP5 1409 aa17.16■□□□□ 0.34
TTC39B-202ENST00000380850 CDCA7LQ96GN5 454 aa17.15■□□□□ 0.34
TTC39B-202ENST00000380850 MAGI1Q96QZ7 1491 aaPredicted RBP17.15■□□□□ 0.34
TTC39B-202ENST00000380850 CCDC136Q96JN2 1154 aa17.14■□□□□ 0.33
TTC39B-202ENST00000380850 PANK3Q9H999 370 aa17.14■□□□□ 0.33
TTC39B-202ENST00000380850 NEUROD2Q15784 382 aa17.11■□□□□ 0.33
TTC39B-202ENST00000380850 ERCC6L2Q5T890 1561 aa17.1■□□□□ 0.33
TTC39B-202ENST00000380850 CCDC146Q8IYE0 955 aa17.1■□□□□ 0.33
TTC39B-202ENST00000380850 ARHGAP5Q13017 1502 aa17.1■□□□□ 0.33
TTC39B-202ENST00000380850 ROCK1Q13464 1354 aa17.09■□□□□ 0.33
TTC39B-202ENST00000380850 TEX14Q8IWB6 1497 aa17.08■□□□□ 0.33
TTC39B-202ENST00000380850 EFCAB2Q5VUJ9 269 aa17.08■□□□□ 0.33
TTC39B-202ENST00000380850 CCDC144AA2RUR9 1427 aa17.08■□□□□ 0.33
TTC39B-202ENST00000380850 PLEKHH2Q8IVE3 1493 aa17.08■□□□□ 0.32
TTC39B-202ENST00000380850 SPAG9O60271 1321 aaKnown RBP17.08■□□□□ 0.32
TTC39B-202ENST00000380850 BCL11AQ9H165 835 aa17.07■□□□□ 0.32
TTC39B-202ENST00000380850 NBR1Q14596 966 aa17.06■□□□□ 0.32
TTC39B-202ENST00000380850 PPP4R2Q9NY27 417 aa17.05■□□□□ 0.32
TTC39B-202ENST00000380850 DNMT1P26358 1616 aaKnown RBP17.03■□□□□ 0.32
TTC39B-202ENST00000380850 TMEM132EQ6IEE7 984 aa17.03■□□□□ 0.32
TTC39B-202ENST00000380850 PNISRQ8TF01 805 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms