RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 GCC2Q8IWJ2 1684 aa20.6■□□□□ 0.89
CLCN4-201ENST00000380829 GPATCH8Q9UKJ3 1502 aaKnown RBP20.6■□□□□ 0.89
CLCN4-201ENST00000380829 ABCC5O15440 1437 aa20.59■□□□□ 0.89
CLCN4-201ENST00000380829 AKNAQ7Z591 1439 aa20.59■□□□□ 0.89
CLCN4-201ENST00000380829 ERCC6L2Q5T890 1561 aa20.58■□□□□ 0.89
CLCN4-201ENST00000380829 KDM6BO15054 1643 aa20.58■□□□□ 0.89
CLCN4-201ENST00000380829 DNMT1P26358 1616 aaKnown RBP20.58■□□□□ 0.89
CLCN4-201ENST00000380829 ZNF777Q9ULD5 760 aaPredicted RBP20.57■□□□□ 0.88
CLCN4-201ENST00000380829 ITSN2Q9NZM3 1697 aa20.57■□□□□ 0.88
CLCN4-201ENST00000380829 CAMSAP2Q08AD1 1489 aa20.57■□□□□ 0.88
CLCN4-201ENST00000380829 TRIM52Q96A61 297 aa20.54■□□□□ 0.88
CLCN4-201ENST00000380829 ROCK1Q13464 1354 aa20.52■□□□□ 0.87
CLCN4-201ENST00000380829 ABCC10Q5T3U5 1492 aa20.52■□□□□ 0.87
CLCN4-201ENST00000380829 CLASP1Q7Z460 1538 aa20.5■□□□□ 0.87
CLCN4-201ENST00000380829 CDC42BPAQ5VT25 1732 aa20.49■□□□□ 0.87
CLCN4-201ENST00000380829 TIMELESSQ9UNS1 1208 aa20.48■□□□□ 0.87
CLCN4-201ENST00000380829 DENND4BO75064 1496 aaPredicted RBP20.47■□□□□ 0.87
CLCN4-201ENST00000380829 MIER1Q8N108 512 aa20.46■□□□□ 0.87
CLCN4-201ENST00000380829 TONSLQ96HA7 1378 aa20.45■□□□□ 0.86
CLCN4-201ENST00000380829 DNAJC5Q9H3Z4 198 aa20.45■□□□□ 0.86
CLCN4-201ENST00000380829 PPP1R15AO75807 674 aaPredicted RBP20.44■□□□□ 0.86
CLCN4-201ENST00000380829 ABCC2Q92887 1545 aa20.43■□□□□ 0.86
CLCN4-201ENST00000380829 MPHOSPH9Q99550 1183 aa20.43■□□□□ 0.86
CLCN4-201ENST00000380829 BCL11AQ9H165 835 aa20.43■□□□□ 0.86
CLCN4-201ENST00000380829 NCOA1Q15788 1441 aa20.41■□□□□ 0.86
CLCN4-201ENST00000380829 CROCC2H7BZ55 1655 aa20.41■□□□□ 0.86
CLCN4-201ENST00000380829 FOXD1Q16676 465 aa20.4■□□□□ 0.86
CLCN4-201ENST00000380829 ADGBQ8N7X0 1667 aa20.39■□□□□ 0.85
CLCN4-201ENST00000380829 ADGRL2O95490 1459 aa20.37■□□□□ 0.85
CLCN4-201ENST00000380829 HNRNPMP52272 730 aaKnown RBP eCLIP20.36■□□□□ 0.85
CLCN4-201ENST00000380829 ANKRD30AQ9BXX3 1397 aa20.35■□□□□ 0.85
CLCN4-201ENST00000380829 TTC37Q6PGP7 1564 aa20.34■□□□□ 0.85
CLCN4-201ENST00000380829 CDC42BPBQ9Y5S2 1711 aa20.34■□□□□ 0.85
CLCN4-201ENST00000380829 C9orf84Q5VXU9 1444 aa20.34■□□□□ 0.85
CLCN4-201ENST00000380829 PREX2Q70Z35 1606 aa20.33■□□□□ 0.85
CLCN4-201ENST00000380829 KCNH8Q96L42 1107 aa20.33■□□□□ 0.85
CLCN4-201ENST00000380829 SLC4A1APQ9BWU0 796 aaKnown RBP20.33■□□□□ 0.84
CLCN4-201ENST00000380829 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.33■□□□□ 0.84
CLCN4-201ENST00000380829 SAMD9LQ8IVG5 1584 aa20.32■□□□□ 0.84
CLCN4-201ENST00000380829 SHANK2Q9UPX8 1470 aa20.31■□□□□ 0.84
CLCN4-201ENST00000380829 TSPY4P0CV99 314 aa20.31■□□□□ 0.84
CLCN4-201ENST00000380829 TSPY10P0CW01 314 aa20.31■□□□□ 0.84
CLCN4-201ENST00000380829 ZCCHC11Q5TAX3 1644 aaKnown RBP20.3■□□□□ 0.84
CLCN4-201ENST00000380829 KDM5BQ9UGL1 1544 aa20.3■□□□□ 0.84
CLCN4-201ENST00000380829 HIRIP3Q9BW71 556 aaPredicted RBP20.3■□□□□ 0.84
CLCN4-201ENST00000380829 MBD5Q9P267 1494 aa20.3■□□□□ 0.84
CLCN4-201ENST00000380829 UHRF1BP1LA0JNW5 1464 aa20.29■□□□□ 0.84
CLCN4-201ENST00000380829 ANKRD50Q9ULJ7 1429 aa20.29■□□□□ 0.84
CLCN4-201ENST00000380829 ARHGAP5Q13017 1502 aa20.28■□□□□ 0.84
CLCN4-201ENST00000380829 PZPP20742 1482 aa20.27■□□□□ 0.84
CLCN4-201ENST00000380829 ARHGEF5Q12774 1597 aa20.27■□□□□ 0.84
CLCN4-201ENST00000380829 ANKRD30BQ9BXX2 1392 aa20.27■□□□□ 0.84
CLCN4-201ENST00000380829 ANP32EQ9BTT0 268 aa20.27■□□□□ 0.84
CLCN4-201ENST00000380829 CCDC141Q6ZP82 1450 aa20.25■□□□□ 0.83
CLCN4-201ENST00000380829 SYCP2Q9BX26 1530 aa20.24■□□□□ 0.83
CLCN4-201ENST00000380829 KIF15Q9NS87 1388 aa20.23■□□□□ 0.83
CLCN4-201ENST00000380829 MYO5CQ9NQX4 1742 aa20.23■□□□□ 0.83
CLCN4-201ENST00000380829 L3MBTL2Q969R5 705 aa20.21■□□□□ 0.83
CLCN4-201ENST00000380829 SUPT16HQ9Y5B9 1047 aaKnown RBP20.21■□□□□ 0.83
CLCN4-201ENST00000380829 RPRD2Q5VT52 1461 aaKnown RBP20.2■□□□□ 0.82
CLCN4-201ENST00000380829 DDX10Q13206 875 aaKnown RBP20.18■□□□□ 0.82
CLCN4-201ENST00000380829 PKD2Q13563 968 aa20.18■□□□□ 0.82
CLCN4-201ENST00000380829 RSPH4AQ5TD94 716 aa20.18■□□□□ 0.82
CLCN4-201ENST00000380829 NUP155O75694 1391 aa20.18■□□□□ 0.82
CLCN4-201ENST00000380829 TSHZ2Q9NRE2 1034 aa20.17■□□□□ 0.82
CLCN4-201ENST00000380829 PLCH2O75038 1416 aa20.17■□□□□ 0.82
CLCN4-201ENST00000380829 OSCARQ8IYS5 282 aa20.16■□□□□ 0.82
CLCN4-201ENST00000380829 KIAA1107Q9UPP5 1409 aa20.16■□□□□ 0.82
CLCN4-201ENST00000380829 ARHGEF12Q9NZN5 1544 aa20.14■□□□□ 0.81
CLCN4-201ENST00000380829 TEX14Q8IWB6 1497 aa20.14■□□□□ 0.81
CLCN4-201ENST00000380829 PLEKHH2Q8IVE3 1493 aa20.13■□□□□ 0.81
CLCN4-201ENST00000380829 EFCAB2Q5VUJ9 269 aa20.12■□□□□ 0.81
CLCN4-201ENST00000380829 MAST1Q9Y2H9 1570 aa20.1■□□□□ 0.81
CLCN4-201ENST00000380829 WDR7Q9Y4E6 1490 aa20.1■□□□□ 0.81
CLCN4-201ENST00000380829 KDM5DQ9BY66 1539 aa20.09■□□□□ 0.81
CLCN4-201ENST00000380829 NBPF8Q3BBV2 869 aa20.08■□□□□ 0.81
CLCN4-201ENST00000380829 ABCC1P33527 1531 aa20.07■□□□□ 0.8
CLCN4-201ENST00000380829 HSPA5P11021 654 aaKnown RBP20.06■□□□□ 0.8
CLCN4-201ENST00000380829 TRAPPC8Q9Y2L5 1435 aa20.05■□□□□ 0.8
CLCN4-201ENST00000380829 PLXNC1O60486 1568 aa20.04■□□□□ 0.8
CLCN4-201ENST00000380829 FAM135AQ9P2D6 1515 aa20.04■□□□□ 0.8
CLCN4-201ENST00000380829 EIF4G2P78344 907 aaKnown RBP eCLIP20.03■□□□□ 0.8
CLCN4-201ENST00000380829 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.03■□□□□ 0.8
CLCN4-201ENST00000380829 ASXL2Q76L83 1435 aa20.03■□□□□ 0.8
CLCN4-201ENST00000380829 ARAP3Q8WWN8 1544 aa20■□□□□ 0.79
CLCN4-201ENST00000380829 AFAP1Q8N556 730 aa20■□□□□ 0.79
CLCN4-201ENST00000380829 DUOX2Q9NRD8 1548 aa19.99■□□□□ 0.79
CLCN4-201ENST00000380829 ZNF326Q5BKZ1 582 aaKnown RBP19.98■□□□□ 0.79
CLCN4-201ENST00000380829 UNC13BO14795 1591 aa19.98■□□□□ 0.79
CLCN4-201ENST00000380829 ABCA9Q8IUA7 1624 aa19.98■□□□□ 0.79
CLCN4-201ENST00000380829 FANCAO15360 1455 aa19.98■□□□□ 0.79
CLCN4-201ENST00000380829 SPAG9O60271 1321 aaKnown RBP19.96■□□□□ 0.79
CLCN4-201ENST00000380829 NPM1P06748 294 aaKnown RBP eCLIP19.96■□□□□ 0.79
CLCN4-201ENST00000380829 WASHC2AQ641Q2 1341 aa19.95■□□□□ 0.78
CLCN4-201ENST00000380829 ERBINQ96RT1 1412 aa19.95■□□□□ 0.78
CLCN4-201ENST00000380829 ZFYVE16Q7Z3T8 1539 aa19.92■□□□□ 0.78
CLCN4-201ENST00000380829 ANP32CO43423 234 aa19.92■□□□□ 0.78
CLCN4-201ENST00000380829 IQGAP3Q86VI3 1631 aa19.91■□□□□ 0.78
CLCN4-201ENST00000380829 ADGRL1O94910 1474 aa19.91■□□□□ 0.78
CLCN4-201ENST00000380829 C11orf95C9JLR9 678 aaPredicted RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms