RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 CSB-PGBD3P0DP91 1061 aa9.17□□□□□ -0.94
CCDC171-201ENST00000380701 GLIPR1L2Q4G1C9 344 aa9.17□□□□□ -0.94
CCDC171-201ENST00000380701 L1TD1Q5T7N2 865 aaKnown RBP9.17□□□□□ -0.94
CCDC171-201ENST00000380701 CCDC88BA6NC98 1476 aa9.16□□□□□ -0.94
CCDC171-201ENST00000380701 KTN1Q86UP2 1357 aaKnown RBP9.16□□□□□ -0.94
CCDC171-201ENST00000380701 KCNJ4P48050 445 aa9.16□□□□□ -0.94
CCDC171-201ENST00000380701 ANO8Q9HCE9 1232 aaPredicted RBP9.16□□□□□ -0.94
CCDC171-201ENST00000380701 LAS1LQ9Y4W2 734 aaKnown RBP9.16□□□□□ -0.94
CCDC171-201ENST00000380701 TDRD9Q8NDG6 1382 aaKnown RBP9.16□□□□□ -0.94
CCDC171-201ENST00000380701 RALBP1Q15311 655 aa9.15□□□□□ -0.94
CCDC171-201ENST00000380701 ROCK2O75116 1388 aaKnown RBP9.15□□□□□ -0.94
CCDC171-201ENST00000380701 PKD2Q13563 968 aa9.15□□□□□ -0.94
CCDC171-201ENST00000380701 NUP155O75694 1391 aa9.15□□□□□ -0.94
CCDC171-201ENST00000380701 JPH4Q96JJ6 628 aa9.15□□□□□ -0.95
CCDC171-201ENST00000380701 WASHC2CQ9Y4E1 1318 aa9.15□□□□□ -0.95
CCDC171-201ENST00000380701 KIF3BO15066 747 aa9.14□□□□□ -0.95
CCDC171-201ENST00000380701 AEBP2Q6ZN18 517 aaPredicted RBP9.13□□□□□ -0.95
CCDC171-201ENST00000380701 CCER2I3L3R5 266 aa9.13□□□□□ -0.95
CCDC171-201ENST00000380701 PTPRGP23470 1445 aa9.13□□□□□ -0.95
CCDC171-201ENST00000380701 CHMP4CQ96CF2 233 aa9.13□□□□□ -0.95
CCDC171-201ENST00000380701 TRIM44Q96DX7 344 aaPredicted RBP9.13□□□□□ -0.95
CCDC171-201ENST00000380701 CCDC34Q96HJ3 373 aa9.13□□□□□ -0.95
CCDC171-201ENST00000380701 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.12□□□□□ -0.95
CCDC171-201ENST00000380701 STK31Q9BXU1 1019 aa9.12□□□□□ -0.95
CCDC171-201ENST00000380701 HTATSF1O43719 755 aaKnown RBP9.12□□□□□ -0.95
CCDC171-201ENST00000380701 PHLDB1Q86UU1 1377 aa9.12□□□□□ -0.95
CCDC171-201ENST00000380701 VGFO15240 615 aaPredicted RBP9.12□□□□□ -0.95
CCDC171-201ENST00000380701 HMGB2P26583 209 aaKnown RBP9.12□□□□□ -0.95
CCDC171-201ENST00000380701 PTMSP20962 102 aa9.11□□□□□ -0.95
CCDC171-201ENST00000380701 ATAD2BQ9ULI0 1458 aa9.11□□□□□ -0.95
CCDC171-201ENST00000380701 ERICH6BQ5W0A0 696 aa9.11□□□□□ -0.95
CCDC171-201ENST00000380701 GPATCH3Q96I76 525 aa9.11□□□□□ -0.95
CCDC171-201ENST00000380701 NEUROD2Q15784 382 aa9.11□□□□□ -0.95
CCDC171-201ENST00000380701 HMMRO75330 724 aa9.1□□□□□ -0.95
CCDC171-201ENST00000380701 NGDNQ8NEJ9 315 aaKnown RBP9.1□□□□□ -0.95
CCDC171-201ENST00000380701 PPP4R2Q9NY27 417 aa9.1□□□□□ -0.95
CCDC171-201ENST00000380701 MROH2BQ7Z745 1585 aa9.1□□□□□ -0.95
CCDC171-201ENST00000380701 PAK3O75914 559 aaPredicted RBP9.09□□□□□ -0.95
CCDC171-201ENST00000380701 GOLGA6L4A6NEF3 574 aa9.09□□□□□ -0.95
CCDC171-201ENST00000380701 KIAA1211Q6ZU35 1233 aa9.09□□□□□ -0.95
CCDC171-201ENST00000380701 NGEFQ8N5V2 710 aa9.09□□□□□ -0.95
CCDC171-201ENST00000380701 FRAT1Q92837 279 aaPredicted RBP9.08□□□□□ -0.96
CCDC171-201ENST00000380701 FANCD2Q9BXW9 1451 aa9.08□□□□□ -0.96
CCDC171-201ENST00000380701 CCDC9Q9Y3X0 531 aaKnown RBP9.08□□□□□ -0.96
CCDC171-201ENST00000380701 WASHC2AQ641Q2 1341 aa9.08□□□□□ -0.96
CCDC171-201ENST00000380701 PTMAP06454 111 aaKnown RBP9.08□□□□□ -0.96
CCDC171-201ENST00000380701 CC2D1BQ5T0F9 858 aaKnown RBP9.08□□□□□ -0.96
CCDC171-201ENST00000380701 SENP3Q9H4L4 574 aaPredicted RBP9.08□□□□□ -0.96
CCDC171-201ENST00000380701 WWC1Q8IX03 1113 aa9.07□□□□□ -0.96
CCDC171-201ENST00000380701 MPHOSPH9Q99550 1183 aa9.07□□□□□ -0.96
CCDC171-201ENST00000380701 STK26Q9P289 416 aa9.07□□□□□ -0.96
CCDC171-201ENST00000380701 TNNT2P45379 298 aaPredicted RBP9.06□□□□□ -0.96
CCDC171-201ENST00000380701 CHAF1AQ13111 956 aaPredicted RBP9.06□□□□□ -0.96
CCDC171-201ENST00000380701 HSP90AB1P08238 724 aaKnown RBP9.05□□□□□ -0.96
CCDC171-201ENST00000380701 RWDD1Q9H446 243 aaPredicted RBP9.05□□□□□ -0.96
CCDC171-201ENST00000380701 PDE3BQ13370 1112 aa9.05□□□□□ -0.96
CCDC171-201ENST00000380701 FOXD1Q16676 465 aa9.05□□□□□ -0.96
CCDC171-201ENST00000380701 G3V3G9 751 aa9.05□□□□□ -0.96
CCDC171-201ENST00000380701 U2AF1L5P0DN76 240 aaPredicted RBP9.05□□□□□ -0.96
CCDC171-201ENST00000380701 U2AF1Q01081 240 aaKnown RBP eCLIP9.05□□□□□ -0.96
CCDC171-201ENST00000380701 LRRFIP1Q32MZ4 808 aaKnown RBP9.05□□□□□ -0.96
CCDC171-201ENST00000380701 DCAF8Q5TAQ9 597 aa9.05□□□□□ -0.96
CCDC171-201ENST00000380701 AMPHP49418 695 aa9.05□□□□□ -0.96
CCDC171-201ENST00000380701 HSCBQ8IWL3 235 aa9.05□□□□□ -0.96
CCDC171-201ENST00000380701 TAF7LQ5H9L4 462 aa9.04□□□□□ -0.96
CCDC171-201ENST00000380701 KIF3AQ9Y496 699 aa9.04□□□□□ -0.96
CCDC171-201ENST00000380701 GORABQ5T7V8 394 aa9.04□□□□□ -0.96
CCDC171-201ENST00000380701 MIER1Q8N108 512 aa9.04□□□□□ -0.96
CCDC171-201ENST00000380701 CCDC144AA2RUR9 1427 aa9.04□□□□□ -0.96
CCDC171-201ENST00000380701 GNL2Q13823 731 aaKnown RBP9.03□□□□□ -0.96
CCDC171-201ENST00000380701 EVC2Q86UK5 1308 aa9.03□□□□□ -0.96
CCDC171-201ENST00000380701 HIRIP3Q9BW71 556 aaPredicted RBP9.03□□□□□ -0.96
CCDC171-201ENST00000380701 PMFBP1Q8TBY8 1022 aa9.02□□□□□ -0.97
CCDC171-201ENST00000380701 SIN3AQ96ST3 1273 aa9.02□□□□□ -0.97
CCDC171-201ENST00000380701 SAFB2Q14151 953 aaKnown RBP eCLIP9.02□□□□□ -0.97
CCDC171-201ENST00000380701 NAP1L2Q9ULW6 460 aaPredicted RBP9.02□□□□□ -0.97
CCDC171-201ENST00000380701 GTF2E1P29083 439 aaPredicted RBP9.01□□□□□ -0.97
CCDC171-201ENST00000380701 SOX12O15370 315 aa9.01□□□□□ -0.97
CCDC171-201ENST00000380701 ISY1Q9ULR0 285 aaKnown RBP9.01□□□□□ -0.97
CCDC171-201ENST00000380701 DCAF8L1A6NGE4 600 aa9.01□□□□□ -0.97
CCDC171-201ENST00000380701 KIAA2012Q0VF49 1180 aa9.01□□□□□ -0.97
CCDC171-201ENST00000380701 HSPA5P11021 654 aaKnown RBP9.01□□□□□ -0.97
CCDC171-201ENST00000380701 NLRP13Q86W25 1043 aa9.01□□□□□ -0.97
CCDC171-201ENST00000380701 CSPP1Q1MSJ5 1256 aa9□□□□□ -0.97
CCDC171-201ENST00000380701 NCAPD3P42695 1498 aa9□□□□□ -0.97
CCDC171-201ENST00000380701 C1orf141Q5JVX7 400 aa9□□□□□ -0.97
CCDC171-201ENST00000380701 COG3Q96JB2 828 aa9□□□□□ -0.97
CCDC171-201ENST00000380701 HNRNPMP52272 730 aaKnown RBP eCLIP9□□□□□ -0.97
CCDC171-201ENST00000380701 SMARCA4P51532 1647 aa9□□□□□ -0.97
CCDC171-201ENST00000380701 CGNL1Q0VF96 1302 aa8.99□□□□□ -0.97
CCDC171-201ENST00000380701 HSP90B1P14625 803 aaKnown RBP8.99□□□□□ -0.97
CCDC171-201ENST00000380701 MYOM3Q5VTT5 1437 aa8.99□□□□□ -0.97
CCDC171-201ENST00000380701 GAPVD1Q14C86 1478 aa8.99□□□□□ -0.97
CCDC171-201ENST00000380701 CYB5RLQ6IPT4 315 aa8.98□□□□□ -0.97
CCDC171-201ENST00000380701 EVA1CP58658 441 aa8.98□□□□□ -0.97
CCDC171-201ENST00000380701 FHOD3Q2V2M9 1422 aa8.98□□□□□ -0.97
CCDC171-201ENST00000380701 TPM4P67936 248 aa8.98□□□□□ -0.97
CCDC171-201ENST00000380701 SYAP1Q96A49 352 aaPredicted RBP8.97□□□□□ -0.97
CCDC171-201ENST00000380701 AMOTL1Q8IY63 956 aa8.97□□□□□ -0.97
CCDC171-201ENST00000380701 SMC4Q9NTJ3 1288 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms