RNA–Protein interactions for RNA: ENST00000380486.3

C2CD2-202, Transcript of C2 calcium dependent domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2CD2, Length 6,345 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD2-202ENST00000380486 MORC1Q86VD1 984 aa24.42■■□□□ 1.5
C2CD2-202ENST00000380486 CCDC9Q9Y3X0 531 aaKnown RBP24.42■■□□□ 1.5
C2CD2-202ENST00000380486 STK26Q9P289 416 aa24.41■■□□□ 1.5
C2CD2-202ENST00000380486 ZNF330Q9Y3S2 320 aaPredicted RBP24.41■■□□□ 1.5
C2CD2-202ENST00000380486 TMF1P82094 1093 aa24.41■■□□□ 1.5
C2CD2-202ENST00000380486 MS4A1P11836 297 aa24.4■■□□□ 1.5
C2CD2-202ENST00000380486 ITPRIPQ8IWB1 547 aa24.39■■□□□ 1.5
C2CD2-202ENST00000380486 ERCC6Q03468 1493 aa24.39■■□□□ 1.49
C2CD2-202ENST00000380486 MFAP1P55081 439 aaKnown RBP24.38■■□□□ 1.49
C2CD2-202ENST00000380486 HSPA5P11021 654 aaKnown RBP24.38■■□□□ 1.49
C2CD2-202ENST00000380486 CHMP4BQ9H444 224 aaKnown RBP24.38■■□□□ 1.49
C2CD2-202ENST00000380486 HSP90B1P14625 803 aaKnown RBP24.37■■□□□ 1.49
C2CD2-202ENST00000380486 PNNQ9H307 717 aaKnown RBP24.36■■□□□ 1.49
C2CD2-202ENST00000380486 FOXD4L5Q5VV16 416 aaPredicted RBP24.36■■□□□ 1.49
C2CD2-202ENST00000380486 FOXD4L4Q8WXT5 416 aaPredicted RBP24.36■■□□□ 1.49
C2CD2-202ENST00000380486 NOC3LQ8WTT2 800 aaKnown RBP24.34■■□□□ 1.49
C2CD2-202ENST00000380486 PAK3O75914 559 aaPredicted RBP24.33■■□□□ 1.49
C2CD2-202ENST00000380486 CREBRFQ8IUR6 639 aa24.31■■□□□ 1.48
C2CD2-202ENST00000380486 RTF1Q92541 710 aaKnown RBP24.31■■□□□ 1.48
C2CD2-202ENST00000380486 KIAA1211Q6ZU35 1233 aa24.3■■□□□ 1.48
C2CD2-202ENST00000380486 CSB-PGBD3P0DP91 1061 aa24.29■■□□□ 1.48
C2CD2-202ENST00000380486 GBP4Q96PP9 640 aa24.27■■□□□ 1.48
C2CD2-202ENST00000380486 KIAA2012Q0VF49 1180 aa24.27■■□□□ 1.48
C2CD2-202ENST00000380486 CCDC146Q8IYE0 955 aa24.26■■□□□ 1.47
C2CD2-202ENST00000380486 PRM3Q9NNZ6 103 aa24.26■■□□□ 1.47
C2CD2-202ENST00000380486 RCAN3Q9UKA8 241 aa24.26■■□□□ 1.47
C2CD2-202ENST00000380486 EIF4G1Q04637 1599 aaKnown RBP24.25■■□□□ 1.47
C2CD2-202ENST00000380486 TMX4Q9H1E5 349 aaPredicted RBP24.25■■□□□ 1.47
C2CD2-202ENST00000380486 CHMP3Q9Y3E7 222 aa24.23■■□□□ 1.47
C2CD2-202ENST00000380486 TRIM6-TRIM34B2RNG4 842 aa24.23■■□□□ 1.47
C2CD2-202ENST00000380486 GOLGA6L3A6NEY3 463 aa24.22■■□□□ 1.47
C2CD2-202ENST00000380486 U2AF1L5P0DN76 240 aaPredicted RBP24.21■■□□□ 1.47
C2CD2-202ENST00000380486 U2AF1Q01081 240 aaKnown RBP eCLIP24.21■■□□□ 1.47
C2CD2-202ENST00000380486 CLUAP1Q96AJ1 413 aa24.21■■□□□ 1.47
C2CD2-202ENST00000380486 TSHZ2Q9NRE2 1034 aa24.2■■□□□ 1.47
C2CD2-202ENST00000380486 TNNT3P45378 269 aaPredicted RBP24.2■■□□□ 1.46
C2CD2-202ENST00000380486 HDGFP51858 240 aaKnown RBP24.2■■□□□ 1.46
C2CD2-202ENST00000380486 KTN1Q86UP2 1357 aaKnown RBP24.19■■□□□ 1.46
C2CD2-202ENST00000380486 CCNB3Q8WWL7 1395 aa24.18■■□□□ 1.46
C2CD2-202ENST00000380486 SLC4A3P48751 1232 aa24.18■■□□□ 1.46
C2CD2-202ENST00000380486 FOXD4L6Q3SYB3 417 aaPredicted RBP24.16■■□□□ 1.46
C2CD2-202ENST00000380486 FOXD4L3Q6VB84 417 aaPredicted RBP24.16■■□□□ 1.46
C2CD2-202ENST00000380486 A0A0U1RQG5 324 aaPredicted RBP24.15■■□□□ 1.46
C2CD2-202ENST00000380486 SLC4A10Q6U841 1118 aa24.15■■□□□ 1.46
C2CD2-202ENST00000380486 WRNQ14191 1432 aaPredicted RBP eCLIP24.15■■□□□ 1.46
C2CD2-202ENST00000380486 G3V3G9 751 aa24.15■■□□□ 1.46
C2CD2-202ENST00000380486 DCAF8Q5TAQ9 597 aa24.15■■□□□ 1.46
C2CD2-202ENST00000380486 NUTM2DQ5VT03 806 aaPredicted RBP24.14■■□□□ 1.46
C2CD2-202ENST00000380486 GGT6Q6P531 493 aa24.14■■□□□ 1.46
C2CD2-202ENST00000380486 RWDD1Q9H446 243 aaPredicted RBP24.14■■□□□ 1.46
C2CD2-202ENST00000380486 CCER2I3L3R5 266 aa24.12■■□□□ 1.45
C2CD2-202ENST00000380486 IPO8O15397 1037 aaKnown RBP24.12■■□□□ 1.45
C2CD2-202ENST00000380486 TNIKQ9UKE5 1360 aa24.11■■□□□ 1.45
C2CD2-202ENST00000380486 SMC4Q9NTJ3 1288 aa24.11■■□□□ 1.45
C2CD2-202ENST00000380486 KANK1Q14678 1352 aa24.1■■□□□ 1.45
C2CD2-202ENST00000380486 ROCK2O75116 1388 aaKnown RBP24.1■■□□□ 1.45
C2CD2-202ENST00000380486 CEP164Q9UPV0 1460 aa24.09■■□□□ 1.45
C2CD2-202ENST00000380486 PKD2Q13563 968 aa24.09■■□□□ 1.45
C2CD2-202ENST00000380486 IPO9Q96P70 1041 aaKnown RBP24.09■■□□□ 1.45
C2CD2-202ENST00000380486 GORABQ5T7V8 394 aa24.09■■□□□ 1.45
C2CD2-202ENST00000380486 KIF27Q86VH2 1401 aa24.08■■□□□ 1.44
C2CD2-202ENST00000380486 HDGFL2Q7Z4V5 671 aaPredicted RBP24.07■■□□□ 1.44
C2CD2-202ENST00000380486 RASSF8Q8NHQ8 419 aa24.06■■□□□ 1.44
C2CD2-202ENST00000380486 SYAP1Q96A49 352 aaPredicted RBP24.06■■□□□ 1.44
C2CD2-202ENST00000380486 TPM4P67936 248 aa24.06■■□□□ 1.44
C2CD2-202ENST00000380486 TCERG1O14776 1098 aaKnown RBP24.06■■□□□ 1.44
C2CD2-202ENST00000380486 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.05■■□□□ 1.44
C2CD2-202ENST00000380486 CALD1Q05682 793 aaKnown RBP24.05■■□□□ 1.44
C2CD2-202ENST00000380486 BAZ1BQ9UIG0 1483 aaKnown RBP24.04■■□□□ 1.44
C2CD2-202ENST00000380486 PTMSP20962 102 aa24.03■■□□□ 1.44
C2CD2-202ENST00000380486 EEA1Q15075 1411 aa24.03■■□□□ 1.44
C2CD2-202ENST00000380486 RRP7AQ9Y3A4 280 aaKnown RBP24.03■■□□□ 1.44
C2CD2-202ENST00000380486 TAF7LQ5H9L4 462 aa24.02■■□□□ 1.44
C2CD2-202ENST00000380486 PMFBP1Q8TBY8 1022 aa24.02■■□□□ 1.44
C2CD2-202ENST00000380486 GOLGA6L1Q8N7Z2 621 aa24.01■■□□□ 1.43
C2CD2-202ENST00000380486 SETD5Q9C0A6 1442 aa24.01■■□□□ 1.43
C2CD2-202ENST00000380486 TOMM22Q9NS69 142 aa24■■□□□ 1.43
C2CD2-202ENST00000380486 PLIN1O60240 522 aa24■■□□□ 1.43
C2CD2-202ENST00000380486 PES1O00541 588 aaKnown RBP24■■□□□ 1.43
C2CD2-202ENST00000380486 CFAP44Q96MT7 982 aa24■■□□□ 1.43
C2CD2-202ENST00000380486 FBXO3Q9UK99 471 aa23.99■■□□□ 1.43
C2CD2-202ENST00000380486 HTATSF1O43719 755 aaKnown RBP23.98■■□□□ 1.43
C2CD2-202ENST00000380486 LTV1Q96GA3 475 aaPredicted RBP23.98■■□□□ 1.43
C2CD2-202ENST00000380486 KANK4Q5T7N3 995 aaPredicted RBP23.98■■□□□ 1.43
C2CD2-202ENST00000380486 VPS53Q5VIR6 699 aa23.98■■□□□ 1.43
C2CD2-202ENST00000380486 PATL2C9JE40 543 aaKnown RBP23.98■■□□□ 1.43
C2CD2-202ENST00000380486 NUTM2FA1L443 756 aa23.97■■□□□ 1.43
C2CD2-202ENST00000380486 WWC1Q8IX03 1113 aa23.96■■□□□ 1.43
C2CD2-202ENST00000380486 BCL11BQ9C0K0 894 aaPredicted RBP23.96■■□□□ 1.43
C2CD2-202ENST00000380486 CCAR2Q8N163 923 aaKnown RBP23.96■■□□□ 1.43
C2CD2-202ENST00000380486 BCL2L13Q9BXK5 485 aa23.96■■□□□ 1.43
C2CD2-202ENST00000380486 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.95■■□□□ 1.42
C2CD2-202ENST00000380486 STK31Q9BXU1 1019 aa23.95■■□□□ 1.42
C2CD2-202ENST00000380486 MSH5O43196 834 aa23.94■■□□□ 1.42
C2CD2-202ENST00000380486 GPATCH3Q96I76 525 aa23.94■■□□□ 1.42
C2CD2-202ENST00000380486 RILPL2Q969X0 211 aa23.93■■□□□ 1.42
C2CD2-202ENST00000380486 HSP90AA2PQ14568 343 aaPredicted RBP23.92■■□□□ 1.42
C2CD2-202ENST00000380486 AEBP2Q6ZN18 517 aaPredicted RBP23.91■■□□□ 1.42
C2CD2-202ENST00000380486 ELL2O00472 640 aaPredicted RBP23.9■■□□□ 1.42
C2CD2-202ENST00000380486 SOGA1O94964 1423 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms