RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 CFAP53Q96M91 514 aa5.36□□□□□ -1.55
BRCA2-201ENST00000380152 TMF1P82094 1093 aa5.36□□□□□ -1.55
BRCA2-201ENST00000380152 PDE4AP27815 886 aa5.35□□□□□ -1.55
BRCA2-201ENST00000380152 U2SURPO15042 1029 aaKnown RBP5.35□□□□□ -1.55
BRCA2-201ENST00000380152 HSP90AA2PQ14568 343 aaPredicted RBP5.35□□□□□ -1.55
BRCA2-201ENST00000380152 CDK11BP21127 795 aaKnown RBP5.35□□□□□ -1.55
BRCA2-201ENST00000380152 L3MBTL2Q969R5 705 aa5.35□□□□□ -1.55
BRCA2-201ENST00000380152 CUX2O14529 1486 aa5.35□□□□□ -1.55
BRCA2-201ENST00000380152 PLEKHD1A6NEE1 506 aa5.35□□□□□ -1.55
BRCA2-201ENST00000380152 GOLGA6L3A6NEY3 463 aa5.35□□□□□ -1.55
BRCA2-201ENST00000380152 MAPK8IP3Q9UPT6 1336 aa5.35□□□□□ -1.55
BRCA2-201ENST00000380152 ZRSR1Q15695 479 aaKnown RBP5.34□□□□□ -1.55
BRCA2-201ENST00000380152 KTN1Q86UP2 1357 aaKnown RBP5.34□□□□□ -1.55
BRCA2-201ENST00000380152 ROCK2O75116 1388 aaKnown RBP5.34□□□□□ -1.55
BRCA2-201ENST00000380152 ANO8Q9HCE9 1232 aaPredicted RBP5.34□□□□□ -1.55
BRCA2-201ENST00000380152 TAOK2Q9UL54 1235 aa5.34□□□□□ -1.55
BRCA2-201ENST00000380152 PLEKHG5O94827 1062 aa5.34□□□□□ -1.56
BRCA2-201ENST00000380152 ZBED9Q6R2W3 1325 aa5.34□□□□□ -1.56
BRCA2-201ENST00000380152 PRKRIP1Q9H875 184 aaPredicted RBP5.34□□□□□ -1.56
BRCA2-201ENST00000380152 CARMIL1Q5VZK9 1371 aa5.33□□□□□ -1.56
BRCA2-201ENST00000380152 CHAF1AQ13111 956 aaPredicted RBP5.33□□□□□ -1.56
BRCA2-201ENST00000380152 TOP2AP11388 1531 aaKnown RBP5.33□□□□□ -1.56
BRCA2-201ENST00000380152 ESF1Q9H501 851 aaKnown RBP5.33□□□□□ -1.56
BRCA2-201ENST00000380152 DRC7Q8IY82 874 aa5.32□□□□□ -1.56
BRCA2-201ENST00000380152 RSPH6AQ9H0K4 717 aa5.32□□□□□ -1.56
BRCA2-201ENST00000380152 MFAP1P55081 439 aaKnown RBP5.32□□□□□ -1.56
BRCA2-201ENST00000380152 VSIG10Q8N0Z9 540 aa5.32□□□□□ -1.56
BRCA2-201ENST00000380152 GOLGA2Q08379 1002 aa5.32□□□□□ -1.56
BRCA2-201ENST00000380152 RALBP1Q15311 655 aa5.32□□□□□ -1.56
BRCA2-201ENST00000380152 FMN1Q68DA7 1419 aa5.32□□□□□ -1.56
BRCA2-201ENST00000380152 CLUAP1Q96AJ1 413 aa5.32□□□□□ -1.56
BRCA2-201ENST00000380152 PKD2Q13563 968 aa5.31□□□□□ -1.56
BRCA2-201ENST00000380152 GBP4Q96PP9 640 aa5.31□□□□□ -1.56
BRCA2-201ENST00000380152 PRDM2Q13029 1718 aa5.31□□□□□ -1.56
BRCA2-201ENST00000380152 CCDC146Q8IYE0 955 aa5.31□□□□□ -1.56
BRCA2-201ENST00000380152 MS4A1P11836 297 aa5.31□□□□□ -1.56
BRCA2-201ENST00000380152 FAM161AQ3B820 660 aa5.31□□□□□ -1.56
BRCA2-201ENST00000380152 EXOC6Q8TAG9 804 aa5.31□□□□□ -1.56
BRCA2-201ENST00000380152 PMFBP1Q8TBY8 1022 aa5.31□□□□□ -1.56
BRCA2-201ENST00000380152 RRP1P56182 461 aaKnown RBP5.31□□□□□ -1.56
BRCA2-201ENST00000380152 IL27Q8NEV9 243 aa5.31□□□□□ -1.56
BRCA2-201ENST00000380152 SMARCA4P51532 1647 aa5.31□□□□□ -1.56
BRCA2-201ENST00000380152 APBB1O00213 710 aa5.3□□□□□ -1.56
BRCA2-201ENST00000380152 FOXD4L1Q9NU39 408 aa5.3□□□□□ -1.56
BRCA2-201ENST00000380152 UNC13AQ9UPW8 1703 aa5.3□□□□□ -1.56
BRCA2-201ENST00000380152 CENPQQ7L2Z9 268 aaPredicted RBP5.3□□□□□ -1.56
BRCA2-201ENST00000380152 ITPRIPQ8IWB1 547 aa5.3□□□□□ -1.56
BRCA2-201ENST00000380152 CRBNQ96SW2 442 aa5.3□□□□□ -1.56
BRCA2-201ENST00000380152 PAK3O75914 559 aaPredicted RBP5.3□□□□□ -1.56
BRCA2-201ENST00000380152 NFKBIBQ15653 356 aa5.29□□□□□ -1.56
BRCA2-201ENST00000380152 NPM1P06748 294 aaKnown RBP eCLIP5.29□□□□□ -1.56
BRCA2-201ENST00000380152 C14orf37Q86TY3 774 aa5.29□□□□□ -1.56
BRCA2-201ENST00000380152 CCDC18Q5T9S5 1454 aa5.29□□□□□ -1.56
BRCA2-201ENST00000380152 CALD1Q05682 793 aaKnown RBP5.29□□□□□ -1.56
BRCA2-201ENST00000380152 RWDD1Q9H446 243 aaPredicted RBP5.29□□□□□ -1.56
BRCA2-201ENST00000380152 ST20-MTHFSA0A0A6YYL1 179 aa5.29□□□□□ -1.56
BRCA2-201ENST00000380152 BCL2L13Q9BXK5 485 aa5.29□□□□□ -1.56
BRCA2-201ENST00000380152 CHMP4BQ9H444 224 aaKnown RBP5.29□□□□□ -1.56
BRCA2-201ENST00000380152 SAFB2Q14151 953 aaKnown RBP eCLIP5.29□□□□□ -1.56
BRCA2-201ENST00000380152 WDR97A6NE52 1622 aa5.29□□□□□ -1.56
BRCA2-201ENST00000380152 KCNJ4P48050 445 aa5.29□□□□□ -1.56
BRCA2-201ENST00000380152 NLRP13Q86W25 1043 aa5.29□□□□□ -1.56
BRCA2-201ENST00000380152 SMC4Q9NTJ3 1288 aa5.28□□□□□ -1.56
BRCA2-201ENST00000380152 MYBBP1AQ9BQG0 1328 aaKnown RBP5.28□□□□□ -1.56
BRCA2-201ENST00000380152 GOLGA6L4A6NEF3 574 aa5.28□□□□□ -1.56
BRCA2-201ENST00000380152 MORC1Q86VD1 984 aa5.28□□□□□ -1.56
BRCA2-201ENST00000380152 AKNAQ7Z591 1439 aa5.28□□□□□ -1.56
BRCA2-201ENST00000380152 PTMSP20962 102 aa5.28□□□□□ -1.56
BRCA2-201ENST00000380152 NUP155O75694 1391 aa5.28□□□□□ -1.56
BRCA2-201ENST00000380152 KIF15Q9NS87 1388 aa5.28□□□□□ -1.56
BRCA2-201ENST00000380152 NAP1L2Q9ULW6 460 aaPredicted RBP5.28□□□□□ -1.56
BRCA2-201ENST00000380152 KIAA2012Q0VF49 1180 aa5.27□□□□□ -1.57
BRCA2-201ENST00000380152 WASHC2AQ641Q2 1341 aa5.27□□□□□ -1.57
BRCA2-201ENST00000380152 KIF21BO75037 1637 aa5.27□□□□□ -1.57
BRCA2-201ENST00000380152 SRPK2P78362 688 aaKnown RBP5.27□□□□□ -1.57
BRCA2-201ENST00000380152 MSH5O43196 834 aa5.27□□□□□ -1.57
BRCA2-201ENST00000380152 MCCP23508 829 aa5.27□□□□□ -1.57
BRCA2-201ENST00000380152 SMARCA2P51531 1590 aa5.27□□□□□ -1.57
BRCA2-201ENST00000380152 FGD1P98174 961 aa5.27□□□□□ -1.57
BRCA2-201ENST00000380152 SOX12O15370 315 aa5.27□□□□□ -1.57
BRCA2-201ENST00000380152 OS9Q13438 667 aaPredicted RBP5.27□□□□□ -1.57
BRCA2-201ENST00000380152 FOXD4L6Q3SYB3 417 aaPredicted RBP5.27□□□□□ -1.57
BRCA2-201ENST00000380152 FOXD4L3Q6VB84 417 aaPredicted RBP5.27□□□□□ -1.57
BRCA2-201ENST00000380152 GOLGA6L6A8MZA4 724 aa5.27□□□□□ -1.57
BRCA2-201ENST00000380152 U2AF1L5P0DN76 240 aaPredicted RBP5.26□□□□□ -1.57
BRCA2-201ENST00000380152 U2AF1Q01081 240 aaKnown RBP eCLIP5.26□□□□□ -1.57
BRCA2-201ENST00000380152 POGKQ9P215 609 aa5.26□□□□□ -1.57
BRCA2-201ENST00000380152 DDX49Q9Y6V7 483 aaKnown RBP5.26□□□□□ -1.57
BRCA2-201ENST00000380152 CENPJQ9HC77 1338 aaPredicted RBP5.26□□□□□ -1.57
BRCA2-201ENST00000380152 FHOD3Q2V2M9 1422 aa5.26□□□□□ -1.57
BRCA2-201ENST00000380152 CFAP44Q96MT7 982 aa5.26□□□□□ -1.57
BRCA2-201ENST00000380152 IPO8O15397 1037 aaKnown RBP5.26□□□□□ -1.57
BRCA2-201ENST00000380152 PDE3BQ13370 1112 aa5.26□□□□□ -1.57
BRCA2-201ENST00000380152 USP47Q96K76 1375 aa5.25□□□□□ -1.57
BRCA2-201ENST00000380152 SYAP1Q96A49 352 aaPredicted RBP5.25□□□□□ -1.57
BRCA2-201ENST00000380152 DDX11L8A8MPP1 907 aa5.25□□□□□ -1.57
BRCA2-201ENST00000380152 FOXD4L5Q5VV16 416 aaPredicted RBP5.25□□□□□ -1.57
BRCA2-201ENST00000380152 FOXD4L4Q8WXT5 416 aaPredicted RBP5.25□□□□□ -1.57
BRCA2-201ENST00000380152 PANK3Q9H999 370 aa5.25□□□□□ -1.57
BRCA2-201ENST00000380152 RRP7AQ9Y3A4 280 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms