RNA–Protein interactions for RNA: ENST00000379608.7

TFAP2A-202, Transcript of transcription factor AP-2 alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TFAP2A, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-202ENST00000379608 ZNF608Q9ULD9 1512 aaPredicted RBP28.98■■■□□ 2.23
TFAP2A-202ENST00000379608 CNTLNQ9NXG0 1405 aa28.97■■■□□ 2.23
TFAP2A-202ENST00000379608 MIA2Q96PC5 1412 aa28.96■■■□□ 2.23
TFAP2A-202ENST00000379608 DAPK1P53355 1430 aa28.96■■■□□ 2.23
TFAP2A-202ENST00000379608 CCDC7Q96M83 1385 aa28.95■■■□□ 2.23
TFAP2A-202ENST00000379608 AKNAQ7Z591 1439 aa28.95■■■□□ 2.22
TFAP2A-202ENST00000379608 MRC2Q9UBG0 1479 aa28.95■■■□□ 2.22
TFAP2A-202ENST00000379608 ANKRD30BQ9BXX2 1392 aa28.94■■■□□ 2.22
TFAP2A-202ENST00000379608 SLC4A1APQ9BWU0 796 aaKnown RBP28.94■■■□□ 2.22
TFAP2A-202ENST00000379608 ABCC5O15440 1437 aa28.94■■■□□ 2.22
TFAP2A-202ENST00000379608 PRKRIP1Q9H875 184 aaPredicted RBP28.94■■■□□ 2.22
TFAP2A-202ENST00000379608 NCOA1Q15788 1441 aa28.91■■■□□ 2.22
TFAP2A-202ENST00000379608 SENP3-EIF4A1A0A087X0R7 540 aa28.91■■■□□ 2.22
TFAP2A-202ENST00000379608 MRS2Q9HD23 443 aa28.9■■■□□ 2.22
TFAP2A-202ENST00000379608 KIF7Q2M1P5 1343 aa28.87■■■□□ 2.21
TFAP2A-202ENST00000379608 TEX14Q8IWB6 1497 aa28.87■■■□□ 2.21
TFAP2A-202ENST00000379608 MSH5O43196 834 aa28.87■■■□□ 2.21
TFAP2A-202ENST00000379608 RPRD2Q5VT52 1461 aaKnown RBP28.86■■■□□ 2.21
TFAP2A-202ENST00000379608 NUP153P49790 1475 aaKnown RBP28.86■■■□□ 2.21
TFAP2A-202ENST00000379608 ZNF326Q5BKZ1 582 aaKnown RBP28.86■■■□□ 2.21
TFAP2A-202ENST00000379608 DISP1Q96F81 1524 aa28.85■■■□□ 2.21
TFAP2A-202ENST00000379608 POLR3GLQ9BT43 218 aa28.85■■■□□ 2.21
TFAP2A-202ENST00000379608 ZNF777Q9ULD5 760 aaPredicted RBP28.85■■■□□ 2.21
TFAP2A-202ENST00000379608 PRG4Q92954 1404 aaPredicted RBP28.83■■■□□ 2.21
TFAP2A-202ENST00000379608 DNMT1P26358 1616 aaKnown RBP28.8■■■□□ 2.2
TFAP2A-202ENST00000379608 KIAA0556O60303 1618 aa28.79■■■□□ 2.2
TFAP2A-202ENST00000379608 ROCK1Q13464 1354 aa28.78■■■□□ 2.2
TFAP2A-202ENST00000379608 SPATA31E1Q6ZUB1 1445 aa28.77■■■□□ 2.2
TFAP2A-202ENST00000379608 IFT140Q96RY7 1462 aa28.76■■■□□ 2.19
TFAP2A-202ENST00000379608 B4GALNT3Q6L9W6 998 aa28.75■■■□□ 2.19
TFAP2A-202ENST00000379608 CFDP1Q9UEE9 299 aaPredicted RBP28.74■■■□□ 2.19
TFAP2A-202ENST00000379608 PZPP20742 1482 aa28.74■■■□□ 2.19
TFAP2A-202ENST00000379608 KIAA0586Q9BVV6 1533 aa28.72■■■□□ 2.19
TFAP2A-202ENST00000379608 CDK11AQ9UQ88 783 aaPredicted RBP28.71■■■□□ 2.19
TFAP2A-202ENST00000379608 PLB1Q6P1J6 1458 aa28.71■■■□□ 2.19
TFAP2A-202ENST00000379608 RAPGEF6Q8TEU7 1601 aa28.71■■■□□ 2.19
TFAP2A-202ENST00000379608 FBLN2P98095 1184 aa28.69■■■□□ 2.18
TFAP2A-202ENST00000379608 CAMSAP2Q08AD1 1489 aa28.68■■■□□ 2.18
TFAP2A-202ENST00000379608 PKD2Q13563 968 aa28.67■■■□□ 2.18
TFAP2A-202ENST00000379608 ZBED9Q6R2W3 1325 aa28.66■■■□□ 2.18
TFAP2A-202ENST00000379608 EIF4G3O43432 1585 aaKnown RBP28.66■■■□□ 2.18
TFAP2A-202ENST00000379608 KIF14Q15058 1648 aa28.65■■■□□ 2.18
TFAP2A-202ENST00000379608 PPP4R2Q9NY27 417 aa28.64■■■□□ 2.18
TFAP2A-202ENST00000379608 GRIN2AQ12879 1464 aa28.64■■■□□ 2.18
TFAP2A-202ENST00000379608 BCORL1Q5H9F3 1711 aa28.62■■■□□ 2.17
TFAP2A-202ENST00000379608 TROQ12816 1431 aaPredicted RBP28.61■■■□□ 2.17
TFAP2A-202ENST00000379608 GPATCH8Q9UKJ3 1502 aaKnown RBP28.61■■■□□ 2.17
TFAP2A-202ENST00000379608 DHX29Q7Z478 1369 aaKnown RBP28.6■■■□□ 2.17
TFAP2A-202ENST00000379608 USP47Q96K76 1375 aa28.6■■■□□ 2.17
TFAP2A-202ENST00000379608 CHMP7Q8WUX9 453 aaPredicted RBP28.57■■■□□ 2.16
TFAP2A-202ENST00000379608 KIAA1107Q9UPP5 1409 aa28.55■■■□□ 2.16
TFAP2A-202ENST00000379608 MBD5Q9P267 1494 aa28.54■■■□□ 2.16
TFAP2A-202ENST00000379608 KDM2AQ9Y2K7 1162 aa28.54■■■□□ 2.16
TFAP2A-202ENST00000379608 POLR1AO95602 1720 aaPredicted RBP28.51■■■□□ 2.15
TFAP2A-202ENST00000379608 CEP170Q5SW79 1584 aa28.51■■■□□ 2.15
TFAP2A-202ENST00000379608 FANCIQ9NVI1 1328 aa28.49■■■□□ 2.15
TFAP2A-202ENST00000379608 ANKRD50Q9ULJ7 1429 aa28.48■■■□□ 2.15
TFAP2A-202ENST00000379608 NUP155O75694 1391 aa28.47■■■□□ 2.15
TFAP2A-202ENST00000379608 ANKRD30AQ9BXX3 1397 aa28.45■■■□□ 2.15
TFAP2A-202ENST00000379608 ERICH6BQ5W0A0 696 aa28.45■■■□□ 2.15
TFAP2A-202ENST00000379608 JPH4Q96JJ6 628 aa28.45■■■□□ 2.15
TFAP2A-202ENST00000379608 ADGBQ8N7X0 1667 aa28.45■■■□□ 2.14
TFAP2A-202ENST00000379608 MAGI1Q96QZ7 1491 aaPredicted RBP28.44■■■□□ 2.14
TFAP2A-202ENST00000379608 CARD11Q9BXL7 1154 aa28.44■■■□□ 2.14
TFAP2A-202ENST00000379608 KDM5CP41229 1560 aa28.42■■■□□ 2.14
TFAP2A-202ENST00000379608 ITSN2Q9NZM3 1697 aa28.42■■■□□ 2.14
TFAP2A-202ENST00000379608 HNRNPMP52272 730 aaKnown RBP eCLIP28.42■■■□□ 2.14
TFAP2A-202ENST00000379608 ERCC6Q03468 1493 aa28.42■■■□□ 2.14
TFAP2A-202ENST00000379608 ADGRL2O95490 1459 aa28.41■■■□□ 2.14
TFAP2A-202ENST00000379608 CROCC2H7BZ55 1655 aa28.41■■■□□ 2.14
TFAP2A-202ENST00000379608 ST20-MTHFSA0A0A6YYL1 179 aa28.4■■■□□ 2.14
TFAP2A-202ENST00000379608 SYNJ2O15056 1496 aa28.39■■■□□ 2.13
TFAP2A-202ENST00000379608 DCAF11Q8TEB1 546 aa28.38■■■□□ 2.13
TFAP2A-202ENST00000379608 NUDCQ9Y266 331 aa28.37■■■□□ 2.13
TFAP2A-202ENST00000379608 PLEKHD1A6NEE1 506 aa28.37■■■□□ 2.13
TFAP2A-202ENST00000379608 ADCY10Q96PN6 1610 aa28.36■■■□□ 2.13
TFAP2A-202ENST00000379608 SMG6Q86US8 1419 aaKnown RBP28.36■■■□□ 2.13
TFAP2A-202ENST00000379608 PNISRQ8TF01 805 aaKnown RBP28.36■■■□□ 2.13
TFAP2A-202ENST00000379608 C9orf84Q5VXU9 1444 aa28.35■■■□□ 2.13
TFAP2A-202ENST00000379608 ERICH6Q7L0X2 663 aa28.35■■■□□ 2.13
TFAP2A-202ENST00000379608 TMC1Q8TDI8 760 aa28.35■■■□□ 2.13
TFAP2A-202ENST00000379608 SALL2Q9Y467 1007 aaPredicted RBP28.34■■■□□ 2.13
TFAP2A-202ENST00000379608 CDC42BPAQ5VT25 1732 aa28.33■■■□□ 2.13
TFAP2A-202ENST00000379608 BCL11AQ9H165 835 aa28.32■■■□□ 2.12
TFAP2A-202ENST00000379608 ATP10BO94823 1461 aa28.3■■■□□ 2.12
TFAP2A-202ENST00000379608 CARMIL2Q6F5E8 1435 aa28.29■■■□□ 2.12
TFAP2A-202ENST00000379608 RALGAPBQ86X10 1494 aa28.29■■■□□ 2.12
TFAP2A-202ENST00000379608 ABCC10Q5T3U5 1492 aa28.28■■■□□ 2.12
TFAP2A-202ENST00000379608 TSPY4P0CV99 314 aa28.28■■■□□ 2.12
TFAP2A-202ENST00000379608 TSPY10P0CW01 314 aa28.28■■■□□ 2.12
TFAP2A-202ENST00000379608 KIF15Q9NS87 1388 aa28.27■■■□□ 2.12
TFAP2A-202ENST00000379608 NUP160Q12769 1436 aa28.27■■■□□ 2.12
TFAP2A-202ENST00000379608 RGL3Q3MIN7 710 aa28.26■■■□□ 2.11
TFAP2A-202ENST00000379608 UHRF1BP1Q6BDS2 1440 aa28.26■■■□□ 2.11
TFAP2A-202ENST00000379608 CCDC136Q96JN2 1154 aa28.25■■■□□ 2.11
TFAP2A-202ENST00000379608 RNF123Q5XPI4 1314 aa28.22■■■□□ 2.11
TFAP2A-202ENST00000379608 NBPF1Q3BBV0 1214 aa28.21■■■□□ 2.11
TFAP2A-202ENST00000379608 ABCA8O94911 1581 aa28.2■■■□□ 2.11
TFAP2A-202ENST00000379608 ROCK2O75116 1388 aaKnown RBP28.2■■■□□ 2.1
TFAP2A-202ENST00000379608 PAK3O75914 559 aaPredicted RBP28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms