RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 PPP1R15AO75807 674 aaPredicted RBP21.37■■□□□ 1.01
PRNP-201ENST00000379440 BCL11AQ9H165 835 aa21.37■■□□□ 1.01
PRNP-201ENST00000379440 ATP10BO94823 1461 aa21.37■■□□□ 1.01
PRNP-201ENST00000379440 ACIN1Q9UKV3 1341 aaKnown RBP21.36■■□□□ 1.01
PRNP-201ENST00000379440 PLEKHD1A6NEE1 506 aa21.36■■□□□ 1.01
PRNP-201ENST00000379440 GPATCH8Q9UKJ3 1502 aaKnown RBP21.36■■□□□ 1.01
PRNP-201ENST00000379440 PTPRGP23470 1445 aa21.35■■□□□ 1.01
PRNP-201ENST00000379440 YTHDC1Q96MU7 727 aaKnown RBP21.35■■□□□ 1.01
PRNP-201ENST00000379440 ZNF777Q9ULD5 760 aaPredicted RBP21.35■■□□□ 1.01
PRNP-201ENST00000379440 DNMT1P26358 1616 aaKnown RBP21.35■■□□□ 1.01
PRNP-201ENST00000379440 TONSLQ96HA7 1378 aa21.33■■□□□ 1.01
PRNP-201ENST00000379440 ADCY10Q96PN6 1610 aa21.33■■□□□ 1
PRNP-201ENST00000379440 DENND4BO75064 1496 aaPredicted RBP21.32■■□□□ 1
PRNP-201ENST00000379440 CAMSAP2Q08AD1 1489 aa21.32■■□□□ 1
PRNP-201ENST00000379440 CENPBP07199 599 aaPredicted RBP21.32■■□□□ 1
PRNP-201ENST00000379440 ROCK1Q13464 1354 aa21.31■■□□□ 1
PRNP-201ENST00000379440 ITSN2Q9NZM3 1697 aa21.29■■□□□ 1
PRNP-201ENST00000379440 MPHOSPH9Q99550 1183 aa21.29■■□□□ 1
PRNP-201ENST00000379440 FOXD1Q16676 465 aa21.25■□□□□ 0.99
PRNP-201ENST00000379440 HIRIP3Q9BW71 556 aaPredicted RBP21.25■□□□□ 0.99
PRNP-201ENST00000379440 ABCC10Q5T3U5 1492 aa21.24■□□□□ 0.99
PRNP-201ENST00000379440 ERICH6Q7L0X2 663 aa21.24■□□□□ 0.99
PRNP-201ENST00000379440 SHROOM2Q13796 1616 aa21.23■□□□□ 0.99
PRNP-201ENST00000379440 ERCC6L2Q5T890 1561 aa21.23■□□□□ 0.99
PRNP-201ENST00000379440 CDC42BPAQ5VT25 1732 aa21.22■□□□□ 0.99
PRNP-201ENST00000379440 NCOA1Q15788 1441 aa21.2■□□□□ 0.98
PRNP-201ENST00000379440 KDM5BQ9UGL1 1544 aa21.18■□□□□ 0.98
PRNP-201ENST00000379440 DDX10Q13206 875 aaKnown RBP21.16■□□□□ 0.98
PRNP-201ENST00000379440 SLC4A1APQ9BWU0 796 aaKnown RBP21.15■□□□□ 0.98
PRNP-201ENST00000379440 CROCC2H7BZ55 1655 aa21.14■□□□□ 0.98
PRNP-201ENST00000379440 ADGBQ8N7X0 1667 aa21.14■□□□□ 0.97
PRNP-201ENST00000379440 ADGRL2O95490 1459 aa21.13■□□□□ 0.97
PRNP-201ENST00000379440 ANKRD30AQ9BXX3 1397 aa21.12■□□□□ 0.97
PRNP-201ENST00000379440 HNRNPMP52272 730 aaKnown RBP eCLIP21.12■□□□□ 0.974e-6■■■■□ 23.6
PRNP-201ENST00000379440 ANKRD30BQ9BXX2 1392 aa21.11■□□□□ 0.97
PRNP-201ENST00000379440 CLASP1Q7Z460 1538 aa21.09■□□□□ 0.97
PRNP-201ENST00000379440 L3MBTL2Q969R5 705 aa21.09■□□□□ 0.97
PRNP-201ENST00000379440 GTF3C3Q9Y5Q9 886 aa21.09■□□□□ 0.97
PRNP-201ENST00000379440 PZPP20742 1482 aa21.08■□□□□ 0.97
PRNP-201ENST00000379440 ABCC2Q92887 1545 aa21.08■□□□□ 0.97
PRNP-201ENST00000379440 C9orf84Q5VXU9 1444 aa21.08■□□□□ 0.97
PRNP-201ENST00000379440 TSPY4P0CV99 314 aa21.07■□□□□ 0.96
PRNP-201ENST00000379440 TSPY10P0CW01 314 aa21.07■□□□□ 0.96
PRNP-201ENST00000379440 ANKRD50Q9ULJ7 1429 aa21.06■□□□□ 0.96
PRNP-201ENST00000379440 CDC42BPBQ9Y5S2 1711 aa21.06■□□□□ 0.96
PRNP-201ENST00000379440 KCNH8Q96L42 1107 aa21.04■□□□□ 0.96
PRNP-201ENST00000379440 MBD5Q9P267 1494 aa21.04■□□□□ 0.96
PRNP-201ENST00000379440 SHANK2Q9UPX8 1470 aa21.04■□□□□ 0.96
PRNP-201ENST00000379440 RPRD2Q5VT52 1461 aaKnown RBP21.03■□□□□ 0.96
PRNP-201ENST00000379440 SAMD9LQ8IVG5 1584 aa21.03■□□□□ 0.96
PRNP-201ENST00000379440 PREX2Q70Z35 1606 aa21.03■□□□□ 0.96
PRNP-201ENST00000379440 TTC37Q6PGP7 1564 aa21.02■□□□□ 0.96
PRNP-201ENST00000379440 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.02■□□□□ 0.95
PRNP-201ENST00000379440 ARHGEF5Q12774 1597 aa21■□□□□ 0.95
PRNP-201ENST00000379440 PKD2Q13563 968 aa21■□□□□ 0.95
PRNP-201ENST00000379440 KIF15Q9NS87 1388 aa20.98■□□□□ 0.95
PRNP-201ENST00000379440 ARHGAP5Q13017 1502 aa20.98■□□□□ 0.95
PRNP-201ENST00000379440 KIAA1107Q9UPP5 1409 aa20.97■□□□□ 0.95
PRNP-201ENST00000379440 HSPA5P11021 654 aaKnown RBP20.97■□□□□ 0.95
PRNP-201ENST00000379440 NUP155O75694 1391 aa20.97■□□□□ 0.95
PRNP-201ENST00000379440 CCDC141Q6ZP82 1450 aa20.97■□□□□ 0.95
PRNP-201ENST00000379440 TEX14Q8IWB6 1497 aa20.96■□□□□ 0.95
PRNP-201ENST00000379440 NBPF8Q3BBV2 869 aa20.96■□□□□ 0.95
PRNP-201ENST00000379440 ZCCHC11Q5TAX3 1644 aaKnown RBP20.95■□□□□ 0.94
PRNP-201ENST00000379440 SYCP2Q9BX26 1530 aa20.95■□□□□ 0.94
PRNP-201ENST00000379440 RSPH4AQ5TD94 716 aa20.93■□□□□ 0.94
PRNP-201ENST00000379440 UHRF1BP1LA0JNW5 1464 aa20.93■□□□□ 0.94
PRNP-201ENST00000379440 EIF4G2P78344 907 aaKnown RBP eCLIP20.91■□□□□ 0.94
PRNP-201ENST00000379440 MYO5CQ9NQX4 1742 aa20.91■□□□□ 0.94
PRNP-201ENST00000379440 WASHC2AQ641Q2 1341 aa20.87■□□□□ 0.93
PRNP-201ENST00000379440 ANP32CO43423 234 aa20.87■□□□□ 0.93
PRNP-201ENST00000379440 PLCH2O75038 1416 aa20.86■□□□□ 0.93
PRNP-201ENST00000379440 ARHGEF12Q9NZN5 1544 aa20.86■□□□□ 0.93
PRNP-201ENST00000379440 KDM5DQ9BY66 1539 aa20.85■□□□□ 0.93
PRNP-201ENST00000379440 EFCAB2Q5VUJ9 269 aa20.83■□□□□ 0.92
PRNP-201ENST00000379440 PLEKHH2Q8IVE3 1493 aa20.82■□□□□ 0.92
PRNP-201ENST00000379440 C11orf95C9JLR9 678 aaPredicted RBP20.82■□□□□ 0.92
PRNP-201ENST00000379440 MAST1Q9Y2H9 1570 aa20.82■□□□□ 0.92
PRNP-201ENST00000379440 ZNF326Q5BKZ1 582 aaKnown RBP20.81■□□□□ 0.92
PRNP-201ENST00000379440 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.79■□□□□ 0.92
PRNP-201ENST00000379440 FAM135AQ9P2D6 1515 aa20.79■□□□□ 0.92
PRNP-201ENST00000379440 CCER2I3L3R5 266 aa20.77■□□□□ 0.92
PRNP-201ENST00000379440 TRAPPC8Q9Y2L5 1435 aa20.76■□□□□ 0.91
PRNP-201ENST00000379440 SPATA31E1Q6ZUB1 1445 aa20.76■□□□□ 0.91
PRNP-201ENST00000379440 PLXNC1O60486 1568 aa20.74■□□□□ 0.91
PRNP-201ENST00000379440 ABCC1P33527 1531 aa20.74■□□□□ 0.91
PRNP-201ENST00000379440 WDR7Q9Y4E6 1490 aa20.74■□□□□ 0.91
PRNP-201ENST00000379440 OSCARQ8IYS5 282 aa20.73■□□□□ 0.91
PRNP-201ENST00000379440 CCDC7Q96M83 1385 aa20.73■□□□□ 0.91
PRNP-201ENST00000379440 AFAP1Q8N556 730 aa20.72■□□□□ 0.91
PRNP-201ENST00000379440 KDM2AQ9Y2K7 1162 aa20.72■□□□□ 0.91
PRNP-201ENST00000379440 UNC13BO14795 1591 aa20.71■□□□□ 0.91
PRNP-201ENST00000379440 DUOX2Q9NRD8 1548 aa20.7■□□□□ 0.9
PRNP-201ENST00000379440 DCAF11Q8TEB1 546 aa20.69■□□□□ 0.9
PRNP-201ENST00000379440 KIF7Q2M1P5 1343 aa20.68■□□□□ 0.9
PRNP-201ENST00000379440 CNTLNQ9NXG0 1405 aa20.67■□□□□ 0.9
PRNP-201ENST00000379440 SPAG9O60271 1321 aaKnown RBP20.67■□□□□ 0.9
PRNP-201ENST00000379440 UHRF1BP1Q6BDS2 1440 aa20.67■□□□□ 0.9
PRNP-201ENST00000379440 USP47Q96K76 1375 aa20.67■□□□□ 0.9
PRNP-201ENST00000379440 ERBINQ96RT1 1412 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms