RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 KNSTRNQ9Y448 316 aa16.81■□□□□ 0.28
HIPK3-202ENST00000379016 TSPY4P0CV99 314 aa16.8■□□□□ 0.28
HIPK3-202ENST00000379016 TSPY10P0CW01 314 aa16.8■□□□□ 0.28
HIPK3-202ENST00000379016 POGKQ9P215 609 aa16.79■□□□□ 0.28
HIPK3-202ENST00000379016 GORABQ5T7V8 394 aa16.79■□□□□ 0.28
HIPK3-202ENST00000379016 TCEAL9Q9UHQ7 104 aa16.77■□□□□ 0.28
HIPK3-202ENST00000379016 NOP58Q9Y2X3 529 aaKnown RBP16.77■□□□□ 0.28
HIPK3-202ENST00000379016 TPD52L1Q16890 204 aaPredicted RBP16.77■□□□□ 0.28
HIPK3-202ENST00000379016 NUDCQ9Y266 331 aa16.77■□□□□ 0.27
HIPK3-202ENST00000379016 SUPT16HQ9Y5B9 1047 aaKnown RBP16.76■□□□□ 0.27
HIPK3-202ENST00000379016 RAD21O60216 631 aa16.75■□□□□ 0.27
HIPK3-202ENST00000379016 SAFB2Q14151 953 aaKnown RBP eCLIP16.73■□□□□ 0.27
HIPK3-202ENST00000379016 CHMP4BQ9H444 224 aaKnown RBP16.73■□□□□ 0.27
HIPK3-202ENST00000379016 FRAT2O75474 233 aaPredicted RBP16.73■□□□□ 0.27
HIPK3-202ENST00000379016 CCDC34Q96HJ3 373 aa16.73■□□□□ 0.27
HIPK3-202ENST00000379016 HTATSF1O43719 755 aaKnown RBP16.72■□□□□ 0.27
HIPK3-202ENST00000379016 TOMM22Q9NS69 142 aa16.72■□□□□ 0.27
HIPK3-202ENST00000379016 VSIG10Q8N0Z9 540 aa16.72■□□□□ 0.27
HIPK3-202ENST00000379016 CHMP7Q8WUX9 453 aaPredicted RBP16.72■□□□□ 0.27
HIPK3-202ENST00000379016 TSR1Q2NL82 804 aaKnown RBP16.71■□□□□ 0.27
HIPK3-202ENST00000379016 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.7■□□□□ 0.26
HIPK3-202ENST00000379016 CSRNP3Q8WYN3 585 aa16.69■□□□□ 0.26
HIPK3-202ENST00000379016 CWC22Q9HCG8 908 aaKnown RBP16.69■□□□□ 0.26
HIPK3-202ENST00000379016 RTF1Q92541 710 aaKnown RBP16.69■□□□□ 0.26
HIPK3-202ENST00000379016 CC2D1BQ5T0F9 858 aaKnown RBP16.69■□□□□ 0.26
HIPK3-202ENST00000379016 NOL8Q76FK4 1167 aaKnown RBP16.68■□□□□ 0.26
HIPK3-202ENST00000379016 B4GALNT3Q6L9W6 998 aa16.68■□□□□ 0.26
HIPK3-202ENST00000379016 CTDP1Q9Y5B0 961 aaPredicted RBP16.67■□□□□ 0.26
HIPK3-202ENST00000379016 PAK3O75914 559 aaPredicted RBP16.66■□□□□ 0.26
HIPK3-202ENST00000379016 CSB-PGBD3P0DP91 1061 aa16.66■□□□□ 0.26
HIPK3-202ENST00000379016 PAF1Q8N7H5 531 aa16.65■□□□□ 0.26
HIPK3-202ENST00000379016 PCMTD1Q96MG8 357 aaPredicted RBP16.65■□□□□ 0.26
HIPK3-202ENST00000379016 SYAP1Q96A49 352 aaPredicted RBP16.65■□□□□ 0.26
HIPK3-202ENST00000379016 DEKP35659 375 aaKnown RBP16.64■□□□□ 0.25
HIPK3-202ENST00000379016 TRIM6-TRIM34B2RNG4 842 aa16.63■□□□□ 0.25
HIPK3-202ENST00000379016 FOXD4L5Q5VV16 416 aaPredicted RBP16.63■□□□□ 0.25
HIPK3-202ENST00000379016 FOXD4L4Q8WXT5 416 aaPredicted RBP16.63■□□□□ 0.25
HIPK3-202ENST00000379016 CCDC70Q6NSX1 233 aa16.63■□□□□ 0.25
HIPK3-202ENST00000379016 MS4A1P11836 297 aa16.63■□□□□ 0.25
HIPK3-202ENST00000379016 MIER1Q8N108 512 aa16.63■□□□□ 0.25
HIPK3-202ENST00000379016 SF3A1Q15459 793 aaKnown RBP16.63■□□□□ 0.25
HIPK3-202ENST00000379016 AK7Q96M32 723 aa16.63■□□□□ 0.25
HIPK3-202ENST00000379016 GBP4Q96PP9 640 aa16.63■□□□□ 0.25
HIPK3-202ENST00000379016 PLCD4Q9BRC7 762 aa16.62■□□□□ 0.25
HIPK3-202ENST00000379016 MSH5O43196 834 aa16.61■□□□□ 0.25
HIPK3-202ENST00000379016 TPM2P07951 284 aa16.61■□□□□ 0.25
HIPK3-202ENST00000379016 FOXD4L1Q9NU39 408 aa16.61■□□□□ 0.25
HIPK3-202ENST00000379016 ZNF771Q7L3S4 317 aaPredicted RBP16.61■□□□□ 0.25
HIPK3-202ENST00000379016 SAMD1Q6SPF0 538 aaPredicted RBP16.61■□□□□ 0.25
HIPK3-202ENST00000379016 MAP7D2Q96T17 732 aa16.61■□□□□ 0.25
HIPK3-202ENST00000379016 GTF2E1P29083 439 aaPredicted RBP16.6■□□□□ 0.25
HIPK3-202ENST00000379016 ODF2Q5BJF6 829 aa16.59■□□□□ 0.25
HIPK3-202ENST00000379016 TRIM34Q9BYJ4 488 aa16.59■□□□□ 0.25
HIPK3-202ENST00000379016 SLKQ9H2G2 1235 aaPredicted RBP16.58■□□□□ 0.25
HIPK3-202ENST00000379016 CDCA8Q53HL2 280 aa16.58■□□□□ 0.24
HIPK3-202ENST00000379016 ZFYVE27Q5T4F4 411 aa16.57■□□□□ 0.24
HIPK3-202ENST00000379016 ZNF592Q92610 1267 aa16.57■□□□□ 0.24
HIPK3-202ENST00000379016 KLHL34Q8N239 644 aa16.57■□□□□ 0.24
HIPK3-202ENST00000379016 GPATCH3Q96I76 525 aa16.56■□□□□ 0.24
HIPK3-202ENST00000379016 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.55■□□□□ 0.24
HIPK3-202ENST00000379016 GPS2Q13227 327 aa16.55■□□□□ 0.24
HIPK3-202ENST00000379016 CT47A1Q5JQC4 288 aaPredicted RBP16.55■□□□□ 0.24
HIPK3-202ENST00000379016 SKIDA1Q1XH10 827 aa16.54■□□□□ 0.24
HIPK3-202ENST00000379016 BCL11BQ9C0K0 894 aaPredicted RBP16.54■□□□□ 0.24
HIPK3-202ENST00000379016 TPM1P09493 284 aa16.53■□□□□ 0.24
HIPK3-202ENST00000379016 FBXW7Q969H0 707 aa16.53■□□□□ 0.24
HIPK3-202ENST00000379016 FOXD4L6Q3SYB3 417 aaPredicted RBP16.53■□□□□ 0.24
HIPK3-202ENST00000379016 FOXD4L3Q6VB84 417 aaPredicted RBP16.53■□□□□ 0.24
HIPK3-202ENST00000379016 CSPP1Q1MSJ5 1256 aa16.53■□□□□ 0.24
HIPK3-202ENST00000379016 STK26Q9P289 416 aa16.53■□□□□ 0.24
HIPK3-202ENST00000379016 MTUS2Q5JR59 1369 aa16.53■□□□□ 0.24
HIPK3-202ENST00000379016 NAP1L1P55209 391 aaKnown RBP16.52■□□□□ 0.24
HIPK3-202ENST00000379016 SRPK2P78362 688 aaKnown RBP16.52■□□□□ 0.23
HIPK3-202ENST00000379016 CCDC97Q96F63 343 aaPredicted RBP16.51■□□□□ 0.23
HIPK3-202ENST00000379016 CFAP44Q96MT7 982 aa16.51■□□□□ 0.23
HIPK3-202ENST00000379016 H3BQV1 296 aa16.51■□□□□ 0.23
HIPK3-202ENST00000379016 IFFO2Q5TF58 517 aa16.51■□□□□ 0.23
HIPK3-202ENST00000379016 AKAP17AQ02040 695 aaKnown RBP16.51■□□□□ 0.23
HIPK3-202ENST00000379016 CCDC43Q96MW1 224 aaKnown RBP16.5■□□□□ 0.23
HIPK3-202ENST00000379016 HMMRO75330 724 aa16.5■□□□□ 0.23
HIPK3-202ENST00000379016 CALD1Q05682 793 aaKnown RBP16.5■□□□□ 0.23
HIPK3-202ENST00000379016 CARD11Q9BXL7 1154 aa16.5■□□□□ 0.23
HIPK3-202ENST00000379016 DHX37Q8IY37 1157 aaKnown RBP16.5■□□□□ 0.23
HIPK3-202ENST00000379016 PPM1FP49593 454 aaPredicted RBP16.49■□□□□ 0.23
HIPK3-202ENST00000379016 GOLGA6L19H0YKK7 550 aa16.49■□□□□ 0.23
HIPK3-202ENST00000379016 HSP90AB2PQ58FF8 381 aa16.49■□□□□ 0.23
HIPK3-202ENST00000379016 RUFY1Q96T51 708 aa16.48■□□□□ 0.23
HIPK3-202ENST00000379016 R3HCC1Q9Y3T6 440 aaKnown RBP16.47■□□□□ 0.23
HIPK3-202ENST00000379016 DHX16O60231 1041 aaKnown RBP16.46■□□□□ 0.23
HIPK3-202ENST00000379016 HSP90AA2PQ14568 343 aaPredicted RBP16.46■□□□□ 0.23
HIPK3-202ENST00000379016 ITPRIPQ8IWB1 547 aa16.46■□□□□ 0.23
HIPK3-202ENST00000379016 MFAP1P55081 439 aaKnown RBP16.46■□□□□ 0.23
HIPK3-202ENST00000379016 PPP4R2Q9NY27 417 aa16.46■□□□□ 0.23
HIPK3-202ENST00000379016 GOLGA6L3A6NEY3 463 aa16.46■□□□□ 0.22
HIPK3-202ENST00000379016 KIF16BQ96L93 1317 aa16.45■□□□□ 0.22
HIPK3-202ENST00000379016 SLC4A10Q6U841 1118 aa16.45■□□□□ 0.22
HIPK3-202ENST00000379016 PHF14O94880 888 aa16.44■□□□□ 0.22
HIPK3-202ENST00000379016 MCTP1Q6DN14 999 aa16.44■□□□□ 0.22
HIPK3-202ENST00000379016 IPO7O95373 1038 aaKnown RBP16.43■□□□□ 0.22
HIPK3-202ENST00000379016 CCDC191Q8NCU4 936 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms