RNA–Protein interactions for RNA: ENST00000378904.4

LYSMD4-203, Transcript of LysM domain containing 4, humanhuman

BASIC

Gene LYSMD4, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-203ENST00000378904 HFM1A2PYH4 1435 aa26.06■■□□□ 1.76
LYSMD4-203ENST00000378904 ZNF777Q9ULD5 760 aaPredicted RBP26.06■■□□□ 1.76
LYSMD4-203ENST00000378904 KCNH8Q96L42 1107 aa26.05■■□□□ 1.76
LYSMD4-203ENST00000378904 MYO5CQ9NQX4 1742 aa26.04■■□□□ 1.76
LYSMD4-203ENST00000378904 ABCC5O15440 1437 aa26.03■■□□□ 1.76
LYSMD4-203ENST00000378904 CHIC2Q9UKJ5 165 aa26.02■■□□□ 1.76
LYSMD4-203ENST00000378904 NAIPQ13075 1403 aa26.01■■□□□ 1.75
LYSMD4-203ENST00000378904 WDR7Q9Y4E6 1490 aa26.01■■□□□ 1.75
LYSMD4-203ENST00000378904 GCC2Q8IWJ2 1684 aa26■■□□□ 1.75
LYSMD4-203ENST00000378904 RIMBP3CA6NJZ7 1639 aa25.99■■□□□ 1.75
LYSMD4-203ENST00000378904 RIMBP3BA6NNM3 1639 aa25.99■■□□□ 1.75
LYSMD4-203ENST00000378904 RIMBP3Q9UFD9 1639 aa25.99■■□□□ 1.75
LYSMD4-203ENST00000378904 AKNAQ7Z591 1439 aa25.99■■□□□ 1.75
LYSMD4-203ENST00000378904 CROCC2H7BZ55 1655 aa25.99■■□□□ 1.75
LYSMD4-203ENST00000378904 SAMD9LQ8IVG5 1584 aa25.97■■□□□ 1.75
LYSMD4-203ENST00000378904 ARHGAP5Q13017 1502 aa25.96■■□□□ 1.75
LYSMD4-203ENST00000378904 RRP7BPQ9NSQ0 103 aa25.96■■□□□ 1.75
LYSMD4-203ENST00000378904 ASXL2Q76L83 1435 aa25.95■■□□□ 1.74
LYSMD4-203ENST00000378904 NPM1P06748 294 aaKnown RBP eCLIP25.95■■□□□ 1.74
LYSMD4-203ENST00000378904 ROCK1Q13464 1354 aa25.94■■□□□ 1.74
LYSMD4-203ENST00000378904 ADGBQ8N7X0 1667 aa25.93■■□□□ 1.74
LYSMD4-203ENST00000378904 CLSPNQ9HAW4 1339 aa25.92■■□□□ 1.74
LYSMD4-203ENST00000378904 PLCH2O75038 1416 aa25.91■■□□□ 1.74
LYSMD4-203ENST00000378904 ARHGEF5Q12774 1597 aa25.9■■□□□ 1.74
LYSMD4-203ENST00000378904 ABCA9Q8IUA7 1624 aa25.88■■□□□ 1.73
LYSMD4-203ENST00000378904 MBD5Q9P267 1494 aa25.88■■□□□ 1.73
LYSMD4-203ENST00000378904 HNRNPMP52272 730 aaKnown RBP eCLIP25.86■■□□□ 1.73
LYSMD4-203ENST00000378904 CYB5RLQ6IPT4 315 aa25.86■■□□□ 1.73
LYSMD4-203ENST00000378904 SHANK2Q9UPX8 1470 aa25.86■■□□□ 1.73
LYSMD4-203ENST00000378904 KDM6BO15054 1643 aa25.86■■□□□ 1.73
LYSMD4-203ENST00000378904 ADGRL2O95490 1459 aa25.85■■□□□ 1.73
LYSMD4-203ENST00000378904 ARAP3Q8WWN8 1544 aa25.84■■□□□ 1.73
LYSMD4-203ENST00000378904 SYCP2Q9BX26 1530 aa25.84■■□□□ 1.73
LYSMD4-203ENST00000378904 MAPKBP1O60336 1514 aa25.83■■□□□ 1.73
LYSMD4-203ENST00000378904 PLEKHH2Q8IVE3 1493 aa25.83■■□□□ 1.73
LYSMD4-203ENST00000378904 NCOA1Q15788 1441 aa25.83■■□□□ 1.73
LYSMD4-203ENST00000378904 CCDC141Q6ZP82 1450 aa25.82■■□□□ 1.72
LYSMD4-203ENST00000378904 C9orf84Q5VXU9 1444 aa25.81■■□□□ 1.72
LYSMD4-203ENST00000378904 EFCAB2Q5VUJ9 269 aa25.81■■□□□ 1.72
LYSMD4-203ENST00000378904 KIAA1107Q9UPP5 1409 aa25.8■■□□□ 1.72
LYSMD4-203ENST00000378904 RSPH4AQ5TD94 716 aa25.79■■□□□ 1.72
LYSMD4-203ENST00000378904 ANKRD30AQ9BXX3 1397 aa25.79■■□□□ 1.72
LYSMD4-203ENST00000378904 TSPY4P0CV99 314 aa25.79■■□□□ 1.72
LYSMD4-203ENST00000378904 TSPY10P0CW01 314 aa25.79■■□□□ 1.72
LYSMD4-203ENST00000378904 ABCC1P33527 1531 aa25.77■■□□□ 1.72
LYSMD4-203ENST00000378904 ARHGEF12Q9NZN5 1544 aa25.76■■□□□ 1.71
LYSMD4-203ENST00000378904 MAST1Q9Y2H9 1570 aa25.73■■□□□ 1.71
LYSMD4-203ENST00000378904 FANCAO15360 1455 aa25.71■■□□□ 1.71
LYSMD4-203ENST00000378904 TRIM52Q96A61 297 aa25.69■■□□□ 1.7
LYSMD4-203ENST00000378904 ACIN1Q9UKV3 1341 aaKnown RBP25.69■■□□□ 1.7
LYSMD4-203ENST00000378904 ANKRD50Q9ULJ7 1429 aa25.66■■□□□ 1.7
LYSMD4-203ENST00000378904 KIF15Q9NS87 1388 aa25.65■■□□□ 1.7
LYSMD4-203ENST00000378904 CD109Q6YHK3 1445 aa25.65■■□□□ 1.7
LYSMD4-203ENST00000378904 TRAPPC8Q9Y2L5 1435 aa25.65■■□□□ 1.7
LYSMD4-203ENST00000378904 PLXNC1O60486 1568 aa25.63■■□□□ 1.69
LYSMD4-203ENST00000378904 DENND4BO75064 1496 aaPredicted RBP25.61■■□□□ 1.69
LYSMD4-203ENST00000378904 ADGRL1O94910 1474 aa25.61■■□□□ 1.69
LYSMD4-203ENST00000378904 CFAP74Q9C0B2 1584 aa25.6■■□□□ 1.69
LYSMD4-203ENST00000378904 MPHOSPH9Q99550 1183 aa25.59■■□□□ 1.69
LYSMD4-203ENST00000378904 SIN3AQ96ST3 1273 aa25.58■■□□□ 1.69
LYSMD4-203ENST00000378904 SCAPERQ9BY12 1400 aa25.57■■□□□ 1.68
LYSMD4-203ENST00000378904 GLI2P10070 1586 aa25.56■■□□□ 1.68
LYSMD4-203ENST00000378904 MAP3K4Q9Y6R4 1608 aa25.56■■□□□ 1.68
LYSMD4-203ENST00000378904 AFAP1Q8N556 730 aa25.55■■□□□ 1.68
LYSMD4-203ENST00000378904 NEUROD1Q13562 356 aa25.54■■□□□ 1.68
LYSMD4-203ENST00000378904 ZFYVE16Q7Z3T8 1539 aa25.53■■□□□ 1.68
LYSMD4-203ENST00000378904 PZPP20742 1482 aa25.53■■□□□ 1.68
LYSMD4-203ENST00000378904 RTEL1-TNFRSF6BF6WH68 1400 aa25.53■■□□□ 1.68
LYSMD4-203ENST00000378904 SPAG9O60271 1321 aaKnown RBP25.53■■□□□ 1.68
LYSMD4-203ENST00000378904 DUOX2Q9NRD8 1548 aa25.52■■□□□ 1.68
LYSMD4-203ENST00000378904 DIP2BQ9P265 1576 aa25.51■■□□□ 1.68
LYSMD4-203ENST00000378904 SLC4A1APQ9BWU0 796 aaKnown RBP25.5■■□□□ 1.67
LYSMD4-203ENST00000378904 INO80Q9ULG1 1556 aaPredicted RBP25.5■■□□□ 1.67
LYSMD4-203ENST00000378904 KDM5DQ9BY66 1539 aa25.48■■□□□ 1.67
LYSMD4-203ENST00000378904 ATP7AQ04656 1500 aa25.48■■□□□ 1.67
LYSMD4-203ENST00000378904 NEO1Q92859 1461 aa25.48■■□□□ 1.67
LYSMD4-203ENST00000378904 ZNF518AQ6AHZ1 1483 aa25.46■■□□□ 1.67
LYSMD4-203ENST00000378904 NUP155O75694 1391 aa25.45■■□□□ 1.67
LYSMD4-203ENST00000378904 ERBINQ96RT1 1412 aa25.45■■□□□ 1.66
LYSMD4-203ENST00000378904 FOXD1Q16676 465 aa25.45■■□□□ 1.66
LYSMD4-203ENST00000378904 TIMELESSQ9UNS1 1208 aa25.45■■□□□ 1.66
LYSMD4-203ENST00000378904 UNC13BO14795 1591 aa25.44■■□□□ 1.66
LYSMD4-203ENST00000378904 FAM69CQ0P6D2 419 aa25.44■■□□□ 1.66
LYSMD4-203ENST00000378904 POGZQ7Z3K3 1410 aa25.42■■□□□ 1.66
LYSMD4-203ENST00000378904 KDM5CP41229 1560 aa25.41■■□□□ 1.66
LYSMD4-203ENST00000378904 KIDINS220Q9ULH0 1771 aa25.41■■□□□ 1.66
LYSMD4-203ENST00000378904 ANKRD30BQ9BXX2 1392 aa25.4■■□□□ 1.66
LYSMD4-203ENST00000378904 MYT1LQ9UL68 1186 aa25.38■■□□□ 1.65
LYSMD4-203ENST00000378904 TSPOAP1O95153 1857 aa25.38■■□□□ 1.65
LYSMD4-203ENST00000378904 TONSLQ96HA7 1378 aa25.38■■□□□ 1.65
LYSMD4-203ENST00000378904 PKD2Q13563 968 aa25.37■■□□□ 1.65
LYSMD4-203ENST00000378904 FAM135AQ9P2D6 1515 aa25.37■■□□□ 1.65
LYSMD4-203ENST00000378904 KIF13AQ9H1H9 1805 aa25.36■■□□□ 1.65
LYSMD4-203ENST00000378904 PPRC1Q5VV67 1664 aaKnown RBP25.35■■□□□ 1.65
LYSMD4-203ENST00000378904 MAGI2Q86UL8 1455 aa25.35■■□□□ 1.65
LYSMD4-203ENST00000378904 IQGAP3Q86VI3 1631 aa25.34■■□□□ 1.65
LYSMD4-203ENST00000378904 HECW2Q9P2P5 1572 aa25.34■■□□□ 1.65
LYSMD4-203ENST00000378904 MLH3Q9UHC1 1453 aa25.33■■□□□ 1.64
LYSMD4-203ENST00000378904 RICTORQ6R327 1708 aa25.32■■□□□ 1.64
LYSMD4-203ENST00000378904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms