RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 CLASP1Q7Z460 1538 aa21.44■■□□□ 1.02
RAB3IP-203ENST00000378809 DNMT1P26358 1616 aaKnown RBP21.43■■□□□ 1.02
RAB3IP-203ENST00000378809 GCC2Q8IWJ2 1684 aa21.42■■□□□ 1.02
RAB3IP-203ENST00000378809 TRIM52Q96A61 297 aa21.41■■□□□ 1.02
RAB3IP-203ENST00000378809 ROCK1Q13464 1354 aa21.38■■□□□ 1.01
RAB3IP-203ENST00000378809 ABCC10Q5T3U5 1492 aa21.37■■□□□ 1.01
RAB3IP-203ENST00000378809 ABCC2Q92887 1545 aa21.36■■□□□ 1.01
RAB3IP-203ENST00000378809 KDM6BO15054 1643 aa21.36■■□□□ 1.01
RAB3IP-203ENST00000378809 CDC42BPAQ5VT25 1732 aa21.33■■□□□ 1
RAB3IP-203ENST00000378809 TIMELESSQ9UNS1 1208 aa21.32■■□□□ 1
RAB3IP-203ENST00000378809 TONSLQ96HA7 1378 aa21.3■■□□□ 1
RAB3IP-203ENST00000378809 MPHOSPH9Q99550 1183 aa21.27■■□□□ 1
RAB3IP-203ENST00000378809 NCOA1Q15788 1441 aa21.26■□□□□ 0.99
RAB3IP-203ENST00000378809 KCNH8Q96L42 1107 aa21.26■□□□□ 0.99
RAB3IP-203ENST00000378809 ACIN1Q9UKV3 1341 aaKnown RBP21.25■□□□□ 0.99
RAB3IP-203ENST00000378809 ANKRD30AQ9BXX3 1397 aa21.25■□□□□ 0.99
RAB3IP-203ENST00000378809 HNRNPMP52272 730 aaKnown RBP eCLIP21.24■□□□□ 0.99
RAB3IP-203ENST00000378809 CROCC2H7BZ55 1655 aa21.24■□□□□ 0.99
RAB3IP-203ENST00000378809 ADGBQ8N7X0 1667 aa21.23■□□□□ 0.99
RAB3IP-203ENST00000378809 TSPY4P0CV99 314 aa21.23■□□□□ 0.99
RAB3IP-203ENST00000378809 TSPY10P0CW01 314 aa21.23■□□□□ 0.99
RAB3IP-203ENST00000378809 UHRF1BP1LA0JNW5 1464 aa21.23■□□□□ 0.99
RAB3IP-203ENST00000378809 ADGRL2O95490 1459 aa21.22■□□□□ 0.99
RAB3IP-203ENST00000378809 PPP1R15AO75807 674 aaPredicted RBP21.22■□□□□ 0.99
RAB3IP-203ENST00000378809 DENND4BO75064 1496 aaPredicted RBP21.22■□□□□ 0.99
RAB3IP-203ENST00000378809 C9orf84Q5VXU9 1444 aa21.21■□□□□ 0.99
RAB3IP-203ENST00000378809 PREX2Q70Z35 1606 aa21.21■□□□□ 0.99
RAB3IP-203ENST00000378809 FOXD1Q16676 465 aa21.21■□□□□ 0.99
RAB3IP-203ENST00000378809 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.2■□□□□ 0.98
RAB3IP-203ENST00000378809 TTC37Q6PGP7 1564 aa21.2■□□□□ 0.98
RAB3IP-203ENST00000378809 ZCCHC11Q5TAX3 1644 aaKnown RBP21.2■□□□□ 0.98
RAB3IP-203ENST00000378809 ARHGAP5Q13017 1502 aa21.19■□□□□ 0.98
RAB3IP-203ENST00000378809 SLC4A1APQ9BWU0 796 aaKnown RBP21.19■□□□□ 0.98
RAB3IP-203ENST00000378809 SHANK2Q9UPX8 1470 aa21.19■□□□□ 0.98
RAB3IP-203ENST00000378809 KDM5BQ9UGL1 1544 aa21.18■□□□□ 0.98
RAB3IP-203ENST00000378809 OSCARQ8IYS5 282 aa21.18■□□□□ 0.98
RAB3IP-203ENST00000378809 CDC42BPBQ9Y5S2 1711 aa21.17■□□□□ 0.98
RAB3IP-203ENST00000378809 SAMD9LQ8IVG5 1584 aa21.17■□□□□ 0.98
RAB3IP-203ENST00000378809 ANKRD50Q9ULJ7 1429 aa21.15■□□□□ 0.98
RAB3IP-203ENST00000378809 MIER1Q8N108 512 aa21.15■□□□□ 0.98
RAB3IP-203ENST00000378809 MBD5Q9P267 1494 aa21.14■□□□□ 0.98
RAB3IP-203ENST00000378809 ARHGEF5Q12774 1597 aa21.14■□□□□ 0.98
RAB3IP-203ENST00000378809 CCDC141Q6ZP82 1450 aa21.14■□□□□ 0.97
RAB3IP-203ENST00000378809 RSPH4AQ5TD94 716 aa21.12■□□□□ 0.97
RAB3IP-203ENST00000378809 SYCP2Q9BX26 1530 aa21.11■□□□□ 0.97
RAB3IP-203ENST00000378809 KIF15Q9NS87 1388 aa21.11■□□□□ 0.97
RAB3IP-203ENST00000378809 MYO5CQ9NQX4 1742 aa21.11■□□□□ 0.97
RAB3IP-203ENST00000378809 PZPP20742 1482 aa21.08■□□□□ 0.97
RAB3IP-203ENST00000378809 ANKRD30BQ9BXX2 1392 aa21.08■□□□□ 0.96
RAB3IP-203ENST00000378809 PLCH2O75038 1416 aa21.06■□□□□ 0.96
RAB3IP-203ENST00000378809 PLEKHH2Q8IVE3 1493 aa21.06■□□□□ 0.96
RAB3IP-203ENST00000378809 EFCAB2Q5VUJ9 269 aa21.05■□□□□ 0.96
RAB3IP-203ENST00000378809 HIRIP3Q9BW71 556 aaPredicted RBP21.04■□□□□ 0.96
RAB3IP-203ENST00000378809 NUP155O75694 1391 aa21.04■□□□□ 0.96
RAB3IP-203ENST00000378809 WDR7Q9Y4E6 1490 aa21.04■□□□□ 0.96
RAB3IP-203ENST00000378809 KIAA1107Q9UPP5 1409 aa21.03■□□□□ 0.96
RAB3IP-203ENST00000378809 PKD2Q13563 968 aa21.03■□□□□ 0.96
RAB3IP-203ENST00000378809 L3MBTL2Q969R5 705 aa21.02■□□□□ 0.96
RAB3IP-203ENST00000378809 RPRD2Q5VT52 1461 aaKnown RBP21.01■□□□□ 0.95
RAB3IP-203ENST00000378809 NPM1P06748 294 aaKnown RBP eCLIP20.98■□□□□ 0.95
RAB3IP-203ENST00000378809 YTHDC1Q96MU7 727 aaKnown RBP20.98■□□□□ 0.95
RAB3IP-203ENST00000378809 ARHGEF12Q9NZN5 1544 aa20.98■□□□□ 0.95
RAB3IP-203ENST00000378809 MAST1Q9Y2H9 1570 aa20.96■□□□□ 0.95
RAB3IP-203ENST00000378809 ASXL2Q76L83 1435 aa20.96■□□□□ 0.95
RAB3IP-203ENST00000378809 CENPBP07199 599 aaPredicted RBP20.94■□□□□ 0.94
RAB3IP-203ENST00000378809 ABCC1P33527 1531 aa20.94■□□□□ 0.94
RAB3IP-203ENST00000378809 DDX10Q13206 875 aaKnown RBP20.94■□□□□ 0.94
RAB3IP-203ENST00000378809 KDM5DQ9BY66 1539 aa20.92■□□□□ 0.94
RAB3IP-203ENST00000378809 TRAPPC8Q9Y2L5 1435 aa20.92■□□□□ 0.94
RAB3IP-203ENST00000378809 TEX14Q8IWB6 1497 aa20.92■□□□□ 0.94
RAB3IP-203ENST00000378809 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.91■□□□□ 0.945e-6■■■■□ 19.5
RAB3IP-203ENST00000378809 ARAP3Q8WWN8 1544 aa20.9■□□□□ 0.94
RAB3IP-203ENST00000378809 PLXNC1O60486 1568 aa20.9■□□□□ 0.94
RAB3IP-203ENST00000378809 FANCAO15360 1455 aa20.89■□□□□ 0.93
RAB3IP-203ENST00000378809 AFAP1Q8N556 730 aa20.88■□□□□ 0.93
RAB3IP-203ENST00000378809 SPAG9O60271 1321 aaKnown RBP20.88■□□□□ 0.93
RAB3IP-203ENST00000378809 ABCA9Q8IUA7 1624 aa20.87■□□□□ 0.93
RAB3IP-203ENST00000378809 DUOX2Q9NRD8 1548 aa20.87■□□□□ 0.93
RAB3IP-203ENST00000378809 FAM135AQ9P2D6 1515 aa20.87■□□□□ 0.93
RAB3IP-203ENST00000378809 EIF4G2P78344 907 aaKnown RBP eCLIP20.85■□□□□ 0.93
RAB3IP-203ENST00000378809 NBPF8Q3BBV2 869 aa20.85■□□□□ 0.93
RAB3IP-203ENST00000378809 HSPA5P11021 654 aaKnown RBP20.84■□□□□ 0.93
RAB3IP-203ENST00000378809 MYT1LQ9UL68 1186 aa20.83■□□□□ 0.93
RAB3IP-203ENST00000378809 ERBINQ96RT1 1412 aa20.83■□□□□ 0.93
RAB3IP-203ENST00000378809 ZNF326Q5BKZ1 582 aaKnown RBP20.82■□□□□ 0.92
RAB3IP-203ENST00000378809 ADGRL1O94910 1474 aa20.81■□□□□ 0.92
RAB3IP-203ENST00000378809 UNC13BO14795 1591 aa20.81■□□□□ 0.92
RAB3IP-203ENST00000378809 SCAPERQ9BY12 1400 aa20.8■□□□□ 0.92
RAB3IP-203ENST00000378809 RTEL1-TNFRSF6BF6WH68 1400 aa20.79■□□□□ 0.92
RAB3IP-203ENST00000378809 ZFYVE16Q7Z3T8 1539 aa20.78■□□□□ 0.92
RAB3IP-203ENST00000378809 CCDC144AA2RUR9 1427 aa20.74■□□□□ 0.91
RAB3IP-203ENST00000378809 CD109Q6YHK3 1445 aa20.74■□□□□ 0.91
RAB3IP-203ENST00000378809 IQGAP3Q86VI3 1631 aa20.74■□□□□ 0.91
RAB3IP-203ENST00000378809 ATP7AQ04656 1500 aa20.73■□□□□ 0.91
RAB3IP-203ENST00000378809 CYB5RLQ6IPT4 315 aa20.72■□□□□ 0.91
RAB3IP-203ENST00000378809 KDM2AQ9Y2K7 1162 aa20.72■□□□□ 0.91
RAB3IP-203ENST00000378809 MAGI2Q86UL8 1455 aa20.72■□□□□ 0.91
RAB3IP-203ENST00000378809 WASHC2AQ641Q2 1341 aa20.71■□□□□ 0.91
RAB3IP-203ENST00000378809 ANP32CO43423 234 aa20.71■□□□□ 0.91
RAB3IP-203ENST00000378809 DCAF11Q8TEB1 546 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms