RNA–Protein interactions for RNA: ENST00000378702.8

DMD-209, Transcript of dystrophin, humanhuman

TSL 1 (best) BASIC

Gene DMD, Length 2,617 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-209ENST00000378702 FGD1P98174 961 aa13.51□□□□□ -0.25
DMD-209ENST00000378702 CALD1Q05682 793 aaKnown RBP13.51□□□□□ -0.25
DMD-209ENST00000378702 POGKQ9P215 609 aa13.5□□□□□ -0.25
DMD-209ENST00000378702 BIVM-ERCC5R4GMW8 1640 aa13.5□□□□□ -0.25
DMD-209ENST00000378702 A0A0U1RQG5 324 aaPredicted RBP13.5□□□□□ -0.25
DMD-209ENST00000378702 PRDM4Q9UKN5 801 aa13.49□□□□□ -0.25
DMD-209ENST00000378702 HFM1A2PYH4 1435 aa13.48□□□□□ -0.25
DMD-209ENST00000378702 PTPN23Q9H3S7 1636 aa13.48□□□□□ -0.25
DMD-209ENST00000378702 PDCL3Q9H2J4 239 aa13.47□□□□□ -0.25
DMD-209ENST00000378702 RCAN3Q9UKA8 241 aa13.44□□□□□ -0.26
DMD-209ENST00000378702 DHX29Q7Z478 1369 aaKnown RBP13.44□□□□□ -0.26
DMD-209ENST00000378702 KIF7Q2M1P5 1343 aa13.44□□□□□ -0.26
DMD-209ENST00000378702 TPM2P07951 284 aa13.43□□□□□ -0.26
DMD-209ENST00000378702 XRCC6P12956 609 aaKnown RBP eCLIP13.43□□□□□ -0.26
DMD-209ENST00000378702 PNISRQ8TF01 805 aaKnown RBP13.43□□□□□ -0.26
DMD-209ENST00000378702 AQRO60306 1485 aaKnown RBP eCLIP13.42□□□□□ -0.26
DMD-209ENST00000378702 FSD2A1L4K1 749 aa13.42□□□□□ -0.26
DMD-209ENST00000378702 FAM161AQ3B820 660 aa13.42□□□□□ -0.26
DMD-209ENST00000378702 C8orf34Q49A92 452 aa13.41□□□□□ -0.26
DMD-209ENST00000378702 SKAP1Q86WV1 359 aa13.41□□□□□ -0.26
DMD-209ENST00000378702 SPATA31E1Q6ZUB1 1445 aa13.41□□□□□ -0.26
DMD-209ENST00000378702 LRPPRCP42704 1394 aaKnown RBP13.4□□□□□ -0.26
DMD-209ENST00000378702 PDE4CQ08493 712 aa13.4□□□□□ -0.26
DMD-209ENST00000378702 KTN1Q86UP2 1357 aaKnown RBP13.39□□□□□ -0.27
DMD-209ENST00000378702 NAIPQ13075 1403 aa13.39□□□□□ -0.27
DMD-209ENST00000378702 GOLGA6L3A6NEY3 463 aa13.38□□□□□ -0.27
DMD-209ENST00000378702 MYOM3Q5VTT5 1437 aa13.38□□□□□ -0.27
DMD-209ENST00000378702 FMN1Q68DA7 1419 aa13.38□□□□□ -0.27
DMD-209ENST00000378702 KDM2BQ8NHM5 1336 aa13.38□□□□□ -0.27
DMD-209ENST00000378702 HECW1Q76N89 1606 aa13.37□□□□□ -0.27
DMD-209ENST00000378702 KIF27Q86VH2 1401 aa13.37□□□□□ -0.27
DMD-209ENST00000378702 PCF11O94913 1555 aaKnown RBP13.36□□□□□ -0.27
DMD-209ENST00000378702 PTPRKQ15262 1439 aa13.36□□□□□ -0.27
DMD-209ENST00000378702 FGD6Q6ZV73 1430 aa13.36□□□□□ -0.27
DMD-209ENST00000378702 RGS3P49796 1198 aa13.36□□□□□ -0.27
DMD-209ENST00000378702 VIRMAQ69YN4 1812 aaKnown RBP13.36□□□□□ -0.27
DMD-209ENST00000378702 PANK2Q9BZ23 570 aa13.36□□□□□ -0.27
DMD-209ENST00000378702 DENND4BO75064 1496 aaPredicted RBP13.35□□□□□ -0.27
DMD-209ENST00000378702 ESPNB1AK53 854 aa13.35□□□□□ -0.27
DMD-209ENST00000378702 PDE3BQ13370 1112 aa13.35□□□□□ -0.27
DMD-209ENST00000378702 SENP3-EIF4A1A0A087X0R7 540 aa13.34□□□□□ -0.27
DMD-209ENST00000378702 CENPQQ7L2Z9 268 aaPredicted RBP13.33□□□□□ -0.28
DMD-209ENST00000378702 CRBNQ96SW2 442 aa13.33□□□□□ -0.28
DMD-209ENST00000378702 TMC1Q8TDI8 760 aa13.32□□□□□ -0.28
DMD-209ENST00000378702 L3MBTL2Q969R5 705 aa13.32□□□□□ -0.28
DMD-209ENST00000378702 ERBB4Q15303 1308 aa13.32□□□□□ -0.28
DMD-209ENST00000378702 MIA2Q96PC5 1412 aa13.32□□□□□ -0.28
DMD-209ENST00000378702 MRE11P49959 708 aa13.3□□□□□ -0.28
DMD-209ENST00000378702 CUX1P39880 1505 aa13.3□□□□□ -0.28
DMD-209ENST00000378702 BRD4O60885 1362 aaPredicted RBP13.3□□□□□ -0.28
DMD-209ENST00000378702 ANTXR1Q9H6X2 564 aa13.29□□□□□ -0.28
DMD-209ENST00000378702 BECN1Q14457 450 aa13.28□□□□□ -0.28
DMD-209ENST00000378702 ARXQ96QS3 562 aa13.28□□□□□ -0.28
DMD-209ENST00000378702 MAP7D2Q96T17 732 aa13.28□□□□□ -0.28
DMD-209ENST00000378702 USP19O94966 1318 aa13.28□□□□□ -0.28
DMD-209ENST00000378702 FYCO1Q9BQS8 1478 aa13.28□□□□□ -0.28
DMD-209ENST00000378702 PLIN1O60240 522 aa13.27□□□□□ -0.28
DMD-209ENST00000378702 NBPF8Q3BBV2 869 aa13.27□□□□□ -0.28
DMD-209ENST00000378702 TEX14Q8IWB6 1497 aa13.27□□□□□ -0.28
DMD-209ENST00000378702 SMAP1Q8IYB5 467 aaPredicted RBP13.27□□□□□ -0.29
DMD-209ENST00000378702 MYH16Q9H6N6 1097 aa13.27□□□□□ -0.29
DMD-209ENST00000378702 GCC2Q8IWJ2 1684 aa13.27□□□□□ -0.29
DMD-209ENST00000378702 ARID4BQ4LE39 1312 aaPredicted RBP13.27□□□□□ -0.29
DMD-209ENST00000378702 BCORL1Q5H9F3 1711 aa13.27□□□□□ -0.29
DMD-209ENST00000378702 ISY1Q9ULR0 285 aaKnown RBP13.26□□□□□ -0.29
DMD-209ENST00000378702 KIAA1211Q6ZU35 1233 aa13.26□□□□□ -0.29
DMD-209ENST00000378702 SLKQ9H2G2 1235 aaPredicted RBP13.25□□□□□ -0.29
DMD-209ENST00000378702 PDIA4P13667 645 aaKnown RBP13.25□□□□□ -0.29
DMD-209ENST00000378702 TERF1P54274 439 aa13.25□□□□□ -0.29
DMD-209ENST00000378702 RPRD2Q5VT52 1461 aaKnown RBP13.24□□□□□ -0.29
DMD-209ENST00000378702 GRPEL1Q9HAV7 217 aa13.24□□□□□ -0.29
DMD-209ENST00000378702 CNGB1Q14028 1251 aaPredicted RBP13.23□□□□□ -0.29
DMD-209ENST00000378702 MYBBP1AQ9BQG0 1328 aaKnown RBP13.23□□□□□ -0.29
DMD-209ENST00000378702 MCM4P33991 863 aa13.23□□□□□ -0.29
DMD-209ENST00000378702 ROCK2O75116 1388 aaKnown RBP13.22□□□□□ -0.29
DMD-209ENST00000378702 KIF15Q9NS87 1388 aa13.22□□□□□ -0.29
DMD-209ENST00000378702 RIPK4P57078 832 aa13.22□□□□□ -0.29
DMD-209ENST00000378702 NLRP1Q9C000 1473 aa13.22□□□□□ -0.29
DMD-209ENST00000378702 TRIM44Q96DX7 344 aaPredicted RBP13.22□□□□□ -0.29
DMD-209ENST00000378702 BCL11BQ9C0K0 894 aaPredicted RBP13.22□□□□□ -0.29
DMD-209ENST00000378702 CASKIN1Q8WXD9 1431 aa13.21□□□□□ -0.29
DMD-209ENST00000378702 CDCA7LQ96GN5 454 aa13.21□□□□□ -0.29
DMD-209ENST00000378702 GZF1Q9H116 711 aaPredicted RBP13.2□□□□□ -0.3
DMD-209ENST00000378702 C20orf194Q5TEA3 1177 aa13.2□□□□□ -0.3
DMD-209ENST00000378702 OFD1O75665 1012 aa13.19□□□□□ -0.3
DMD-209ENST00000378702 RALBP1Q15311 655 aa13.19□□□□□ -0.3
DMD-209ENST00000378702 UNC13AQ9UPW8 1703 aa13.19□□□□□ -0.3
DMD-209ENST00000378702 TRAK2O60296 914 aa13.18□□□□□ -0.3
DMD-209ENST00000378702 UTP14CQ5TAP6 766 aaKnown RBP13.18□□□□□ -0.3
DMD-209ENST00000378702 ZMYM4Q5VZL5 1548 aa13.18□□□□□ -0.3
DMD-209ENST00000378702 INSRP06213 1382 aa13.18□□□□□ -0.3
DMD-209ENST00000378702 MPHOSPH9Q99550 1183 aa13.17□□□□□ -0.3
DMD-209ENST00000378702 THOC2Q8NI27 1593 aaKnown RBP13.17□□□□□ -0.3
DMD-209ENST00000378702 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.17□□□□□ -0.3
DMD-209ENST00000378702 BBXQ8WY36 941 aaPredicted RBP13.17□□□□□ -0.3
DMD-209ENST00000378702 KDM6BO15054 1643 aa13.17□□□□□ -0.3
DMD-209ENST00000378702 PLEKHH2Q8IVE3 1493 aa13.17□□□□□ -0.3
DMD-209ENST00000378702 GTF2E1P29083 439 aaPredicted RBP13.16□□□□□ -0.3
DMD-209ENST00000378702 MTERF4Q7Z6M4 381 aaKnown RBP13.16□□□□□ -0.3
DMD-209ENST00000378702 USP47Q96K76 1375 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms