RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 P3H3Q8IVL6 736 aa9.27□□□□□ -0.92
CDKAL1-202ENST00000378610 KCNV2Q8TDN2 545 aa9.27□□□□□ -0.92
CDKAL1-202ENST00000378610 FOXD4L5Q5VV16 416 aaPredicted RBP9.27□□□□□ -0.93
CDKAL1-202ENST00000378610 FOXD4L4Q8WXT5 416 aaPredicted RBP9.27□□□□□ -0.93
CDKAL1-202ENST00000378610 RBM25P49756 843 aaKnown RBP9.27□□□□□ -0.93
CDKAL1-202ENST00000378610 ATAD2BQ9ULI0 1458 aa9.26□□□□□ -0.93
CDKAL1-202ENST00000378610 HMGXB3Q12766 1538 aa9.26□□□□□ -0.93
CDKAL1-202ENST00000378610 CFAP43Q8NDM7 1665 aa9.26□□□□□ -0.93
CDKAL1-202ENST00000378610 KDM5BQ9UGL1 1544 aa9.25□□□□□ -0.93
CDKAL1-202ENST00000378610 CCNB3Q8WWL7 1395 aa9.25□□□□□ -0.93
CDKAL1-202ENST00000378610 POLR1AO95602 1720 aaPredicted RBP9.25□□□□□ -0.93
CDKAL1-202ENST00000378610 NEFLP07196 543 aa9.25□□□□□ -0.93
CDKAL1-202ENST00000378610 CCDC82Q8N4S0 544 aa9.24□□□□□ -0.93
CDKAL1-202ENST00000378610 TIAM1Q13009 1591 aa9.23□□□□□ -0.93
CDKAL1-202ENST00000378610 DHX37Q8IY37 1157 aaKnown RBP9.23□□□□□ -0.93
CDKAL1-202ENST00000378610 ANO8Q9HCE9 1232 aaPredicted RBP9.23□□□□□ -0.93
CDKAL1-202ENST00000378610 U3KPZ7 1027 aaPredicted RBP9.23□□□□□ -0.93
CDKAL1-202ENST00000378610 RAB3GAP2Q9H2M9 1393 aa9.23□□□□□ -0.93
CDKAL1-202ENST00000378610 MKRN3Q13064 507 aaKnown RBP9.23□□□□□ -0.93
CDKAL1-202ENST00000378610 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.23□□□□□ -0.935e-7■□□□□ 9.9
CDKAL1-202ENST00000378610 GPBP1L1Q9HC44 474 aaPredicted RBP9.23□□□□□ -0.93
CDKAL1-202ENST00000378610 IL27Q8NEV9 243 aa9.22□□□□□ -0.93
CDKAL1-202ENST00000378610 UBE2Q2Q8WVN8 375 aa9.22□□□□□ -0.93
CDKAL1-202ENST00000378610 ITGAEP38570 1179 aa9.21□□□□□ -0.93
CDKAL1-202ENST00000378610 AEBP1Q8IUX7 1158 aa9.21□□□□□ -0.93
CDKAL1-202ENST00000378610 ABCA5Q8WWZ7 1642 aa9.2□□□□□ -0.94
CDKAL1-202ENST00000378610 NCOA2Q15596 1464 aa9.2□□□□□ -0.94
CDKAL1-202ENST00000378610 ZNF219Q9P2Y4 722 aaPredicted RBP9.2□□□□□ -0.94
CDKAL1-202ENST00000378610 KANK4Q5T7N3 995 aaPredicted RBP9.19□□□□□ -0.94
CDKAL1-202ENST00000378610 CIZ1Q9ULV3 898 aaPredicted RBP9.19□□□□□ -0.94
CDKAL1-202ENST00000378610 SETD5Q9C0A6 1442 aa9.19□□□□□ -0.94
CDKAL1-202ENST00000378610 WASHC2AQ641Q2 1341 aa9.19□□□□□ -0.94
CDKAL1-202ENST00000378610 ARHGAP35Q9NRY4 1499 aa9.18□□□□□ -0.94
CDKAL1-202ENST00000378610 RNF25Q96BH1 459 aaPredicted RBP9.18□□□□□ -0.94
CDKAL1-202ENST00000378610 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.17□□□□□ -0.94
CDKAL1-202ENST00000378610 MFAP1P55081 439 aaKnown RBP9.16□□□□□ -0.94
CDKAL1-202ENST00000378610 TMCO4Q5TGY1 634 aa9.16□□□□□ -0.94
CDKAL1-202ENST00000378610 PPP4R2Q9NY27 417 aa9.16□□□□□ -0.94
CDKAL1-202ENST00000378610 C11orf95C9JLR9 678 aaPredicted RBP9.16□□□□□ -0.94
CDKAL1-202ENST00000378610 NOP58Q9Y2X3 529 aaKnown RBP9.16□□□□□ -0.94
CDKAL1-202ENST00000378610 SALL2Q9Y467 1007 aaPredicted RBP9.16□□□□□ -0.94
CDKAL1-202ENST00000378610 TRAIPQ9BWF2 469 aa9.16□□□□□ -0.94
CDKAL1-202ENST00000378610 FHAD1B1AJZ9 1412 aa9.15□□□□□ -0.94
CDKAL1-202ENST00000378610 DDX10Q13206 875 aaKnown RBP9.15□□□□□ -0.94
CDKAL1-202ENST00000378610 WASHC2CQ9Y4E1 1318 aa9.13□□□□□ -0.95
CDKAL1-202ENST00000378610 LRRC9Q6ZRR7 1453 aa9.13□□□□□ -0.95
CDKAL1-202ENST00000378610 TRIM52Q96A61 297 aa9.13□□□□□ -0.95
CDKAL1-202ENST00000378610 RNF123Q5XPI4 1314 aa9.12□□□□□ -0.95
CDKAL1-202ENST00000378610 ANP32CO43423 234 aa9.12□□□□□ -0.95
CDKAL1-202ENST00000378610 ZMYND10O75800 440 aa9.12□□□□□ -0.95
CDKAL1-202ENST00000378610 PAK3O75914 559 aaPredicted RBP9.11□□□□□ -0.95
CDKAL1-202ENST00000378610 BRD2P25440 801 aaKnown RBP9.11□□□□□ -0.95
CDKAL1-202ENST00000378610 GZF1Q9H116 711 aaPredicted RBP9.1□□□□□ -0.95
CDKAL1-202ENST00000378610 WDR70Q9NW82 654 aa9.1□□□□□ -0.95
CDKAL1-202ENST00000378610 USP35Q9P2H5 1018 aa9.1□□□□□ -0.95
CDKAL1-202ENST00000378610 CFTRP13569 1480 aa9.08□□□□□ -0.96
CDKAL1-202ENST00000378610 IPO9Q96P70 1041 aaKnown RBP9.08□□□□□ -0.96
CDKAL1-202ENST00000378610 CUX1P39880 1505 aa9.07□□□□□ -0.96
CDKAL1-202ENST00000378610 HECW1Q76N89 1606 aa9.07□□□□□ -0.96
CDKAL1-202ENST00000378610 PTPN23Q9H3S7 1636 aa9.07□□□□□ -0.96
CDKAL1-202ENST00000378610 PHLDB1Q86UU1 1377 aa9.06□□□□□ -0.96
CDKAL1-202ENST00000378610 E9PSI1 815 aa9.06□□□□□ -0.96
CDKAL1-202ENST00000378610 PLCD3Q8N3E9 789 aa9.06□□□□□ -0.96
CDKAL1-202ENST00000378610 POLR3GLQ9BT43 218 aa9.06□□□□□ -0.96
CDKAL1-202ENST00000378610 ZBED9Q6R2W3 1325 aa9.06□□□□□ -0.96
CDKAL1-202ENST00000378610 GCC2Q8IWJ2 1684 aa9.06□□□□□ -0.96
CDKAL1-202ENST00000378610 KDM4CQ9H3R0 1056 aa9.06□□□□□ -0.96
CDKAL1-202ENST00000378610 SMG6Q86US8 1419 aaKnown RBP9.06□□□□□ -0.96
CDKAL1-202ENST00000378610 PCF11O94913 1555 aaKnown RBP9.05□□□□□ -0.96
CDKAL1-202ENST00000378610 CNTLNQ9NXG0 1405 aa9.05□□□□□ -0.96
CDKAL1-202ENST00000378610 CLUAP1Q96AJ1 413 aa9.04□□□□□ -0.96
CDKAL1-202ENST00000378610 UACAQ9BZF9 1416 aa9.04□□□□□ -0.96
CDKAL1-202ENST00000378610 SEMA3EO15041 775 aa9.03□□□□□ -0.96
CDKAL1-202ENST00000378610 FAM177A1Q8N128 213 aaPredicted RBP9.03□□□□□ -0.96
CDKAL1-202ENST00000378610 SIN3AQ96ST3 1273 aa9.03□□□□□ -0.96
CDKAL1-202ENST00000378610 AQRO60306 1485 aaKnown RBP eCLIP9.03□□□□□ -0.96
CDKAL1-202ENST00000378610 CADPS2Q86UW7 1296 aa9.02□□□□□ -0.96
CDKAL1-202ENST00000378610 HFM1A2PYH4 1435 aa9.02□□□□□ -0.96
CDKAL1-202ENST00000378610 KIF27Q86VH2 1401 aa9.02□□□□□ -0.96
CDKAL1-202ENST00000378610 NCOA1Q15788 1441 aa9.02□□□□□ -0.97
CDKAL1-202ENST00000378610 DENND4BO75064 1496 aaPredicted RBP9.01□□□□□ -0.97
CDKAL1-202ENST00000378610 TRAK2O60296 914 aa9.01□□□□□ -0.97
CDKAL1-202ENST00000378610 POLA2Q14181 598 aa9.01□□□□□ -0.97
CDKAL1-202ENST00000378610 ZNF692Q9BU19 519 aaPredicted RBP9.01□□□□□ -0.97
CDKAL1-202ENST00000378610 LRRIQ1Q96JM4 1722 aa9.01□□□□□ -0.97
CDKAL1-202ENST00000378610 HNRNPUQ00839 825 aaKnown RBP eCLIP9□□□□□ -0.97
CDKAL1-202ENST00000378610 CCDC136Q96JN2 1154 aa9□□□□□ -0.97
CDKAL1-202ENST00000378610 FYCO1Q9BQS8 1478 aa9□□□□□ -0.97
CDKAL1-202ENST00000378610 CCDC18Q5T9S5 1454 aa8.99□□□□□ -0.97
CDKAL1-202ENST00000378610 IRF5Q13568 498 aa8.99□□□□□ -0.97
CDKAL1-202ENST00000378610 TESPA1A2RU30 521 aaPredicted RBP8.98□□□□□ -0.97
CDKAL1-202ENST00000378610 STK25O00506 426 aa8.98□□□□□ -0.97
CDKAL1-202ENST00000378610 IRX6P78412 446 aaPredicted RBP8.98□□□□□ -0.97
CDKAL1-202ENST00000378610 RETREG2Q8NC44 543 aa8.98□□□□□ -0.97
CDKAL1-202ENST00000378610 BARGINQ6ZT62 677 aa8.98□□□□□ -0.97
CDKAL1-202ENST00000378610 B4GALNT3Q6L9W6 998 aa8.98□□□□□ -0.97
CDKAL1-202ENST00000378610 CC2D2AQ9P2K1 1620 aa8.97□□□□□ -0.97
CDKAL1-202ENST00000378610 EFCAB5A4FU69 1503 aa8.97□□□□□ -0.97
CDKAL1-202ENST00000378610 FLIIQ13045 1269 aa8.96□□□□□ -0.97
CDKAL1-202ENST00000378610 SPATA31E1Q6ZUB1 1445 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms