RNA–Protein interactions for RNA: ENST00000378513.7

RER1-203, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-203ENST00000378513 ARHGEF11O15085 1522 aa21.4■■□□□ 1.02
RER1-203ENST00000378513 HECW1Q76N89 1606 aa21.39■■□□□ 1.01
RER1-203ENST00000378513 PBRM1Q86U86 1689 aa21.38■■□□□ 1.01
RER1-203ENST00000378513 PRG4Q92954 1404 aaPredicted RBP21.36■■□□□ 1.01
RER1-203ENST00000378513 CHMP7Q8WUX9 453 aaPredicted RBP21.36■■□□□ 1.01
RER1-203ENST00000378513 ADAMTS12P58397 1594 aa21.36■■□□□ 1.01
RER1-203ENST00000378513 CFDP1Q9UEE9 299 aaPredicted RBP21.35■■□□□ 1.01
RER1-203ENST00000378513 WDR62O43379 1518 aa21.34■■□□□ 1.01
RER1-203ENST00000378513 TCOF1Q13428 1488 aaKnown RBP21.34■■□□□ 1.01
RER1-203ENST00000378513 MRC2Q9UBG0 1479 aa21.34■■□□□ 1.01
RER1-203ENST00000378513 ABCC5O15440 1437 aa21.33■■□□□ 1
RER1-203ENST00000378513 DAPK1P53355 1430 aa21.33■■□□□ 1
RER1-203ENST00000378513 MRS2Q9HD23 443 aa21.32■■□□□ 1
RER1-203ENST00000378513 NUP153P49790 1475 aaKnown RBP21.3■■□□□ 1
RER1-203ENST00000378513 DISP1Q96F81 1524 aa21.29■■□□□ 1
RER1-203ENST00000378513 RBM19Q9Y4C8 960 aaKnown RBP21.29■■□□□ 1
RER1-203ENST00000378513 MIA2Q96PC5 1412 aa21.28■■□□□ 1
RER1-203ENST00000378513 PLB1Q6P1J6 1458 aa21.28■■□□□ 1
RER1-203ENST00000378513 ANKRD30BQ9BXX2 1392 aa21.28■■□□□ 1
RER1-203ENST00000378513 CDK11AQ9UQ88 783 aaPredicted RBP21.28■■□□□ 1
RER1-203ENST00000378513 PRKRIP1Q9H875 184 aaPredicted RBP21.27■■□□□ 1
RER1-203ENST00000378513 CCDC7Q96M83 1385 aa21.26■□□□□ 0.99
RER1-203ENST00000378513 KIF7Q2M1P5 1343 aa21.26■□□□□ 0.99
RER1-203ENST00000378513 PKD2Q13563 968 aa21.25■□□□□ 0.99
RER1-203ENST00000378513 GCC2Q8IWJ2 1684 aa21.25■□□□□ 0.99
RER1-203ENST00000378513 KDM2AQ9Y2K7 1162 aa21.24■□□□□ 0.99
RER1-203ENST00000378513 CNTLNQ9NXG0 1405 aa21.22■□□□□ 0.99
RER1-203ENST00000378513 KIAA0586Q9BVV6 1533 aa21.22■□□□□ 0.99
RER1-203ENST00000378513 KIAA0556O60303 1618 aa21.2■□□□□ 0.98
RER1-203ENST00000378513 GRIN2AQ12879 1464 aa21.19■□□□□ 0.98
RER1-203ENST00000378513 JPH4Q96JJ6 628 aa21.19■□□□□ 0.98
RER1-203ENST00000378513 ERCC6Q03468 1493 aa21.19■□□□□ 0.98
RER1-203ENST00000378513 IFT140Q96RY7 1462 aa21.18■□□□□ 0.98
RER1-203ENST00000378513 RPRD2Q5VT52 1461 aaKnown RBP21.18■□□□□ 0.98
RER1-203ENST00000378513 NCOA1Q15788 1441 aa21.17■□□□□ 0.98
RER1-203ENST00000378513 AKNAQ7Z591 1439 aa21.17■□□□□ 0.98
RER1-203ENST00000378513 B4GALNT3Q6L9W6 998 aa21.15■□□□□ 0.98
RER1-203ENST00000378513 TEX14Q8IWB6 1497 aa21.15■□□□□ 0.98
RER1-203ENST00000378513 HNRNPMP52272 730 aaKnown RBP eCLIP21.15■□□□□ 0.983e-7■■■□□ 17.8
RER1-203ENST00000378513 CAMSAP2Q08AD1 1489 aa21.14■□□□□ 0.97
RER1-203ENST00000378513 ERICH6Q7L0X2 663 aa21.14■□□□□ 0.97
RER1-203ENST00000378513 RAPGEF6Q8TEU7 1601 aa21.13■□□□□ 0.97
RER1-203ENST00000378513 ROCK1Q13464 1354 aa21.13■□□□□ 0.97
RER1-203ENST00000378513 EIF4G3O43432 1585 aaKnown RBP21.12■□□□□ 0.97
RER1-203ENST00000378513 KIF14Q15058 1648 aa21.12■□□□□ 0.97
RER1-203ENST00000378513 TROQ12816 1431 aaPredicted RBP21.12■□□□□ 0.97
RER1-203ENST00000378513 PZPP20742 1482 aa21.11■□□□□ 0.97
RER1-203ENST00000378513 DNMT1P26358 1616 aaKnown RBP21.11■□□□□ 0.97
RER1-203ENST00000378513 PLEKHD1A6NEE1 506 aa21.11■□□□□ 0.97
RER1-203ENST00000378513 GPATCH8Q9UKJ3 1502 aaKnown RBP21.1■□□□□ 0.97
RER1-203ENST00000378513 NUP155O75694 1391 aa21.09■□□□□ 0.97
RER1-203ENST00000378513 USP47Q96K76 1375 aa21.08■□□□□ 0.96
RER1-203ENST00000378513 SALL2Q9Y467 1007 aaPredicted RBP21.06■□□□□ 0.96
RER1-203ENST00000378513 RGL3Q3MIN7 710 aa21.06■□□□□ 0.96
RER1-203ENST00000378513 CEP170Q5SW79 1584 aa21.06■□□□□ 0.96
RER1-203ENST00000378513 SPATA31E1Q6ZUB1 1445 aa21.05■□□□□ 0.96
RER1-203ENST00000378513 DCAF11Q8TEB1 546 aa21.05■□□□□ 0.96
RER1-203ENST00000378513 CARD11Q9BXL7 1154 aa21.05■□□□□ 0.96
RER1-203ENST00000378513 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.05■□□□□ 0.961e-6■□□□□ 9.9
RER1-203ENST00000378513 ANKRD50Q9ULJ7 1429 aa21.04■□□□□ 0.96
RER1-203ENST00000378513 MSH5O43196 834 aa21.03■□□□□ 0.96
RER1-203ENST00000378513 TSPY4P0CV99 314 aa21.02■□□□□ 0.96
RER1-203ENST00000378513 TSPY10P0CW01 314 aa21.02■□□□□ 0.96
RER1-203ENST00000378513 ANKRD30AQ9BXX3 1397 aa21.02■□□□□ 0.96
RER1-203ENST00000378513 ST20-MTHFSA0A0A6YYL1 179 aa21.01■□□□□ 0.95
RER1-203ENST00000378513 KIAA1107Q9UPP5 1409 aa21.01■□□□□ 0.95
RER1-203ENST00000378513 ZBED9Q6R2W3 1325 aa20.98■□□□□ 0.95
RER1-203ENST00000378513 CARMIL2Q6F5E8 1435 aa20.98■□□□□ 0.95
RER1-203ENST00000378513 SYNJ2O15056 1496 aa20.96■□□□□ 0.95
RER1-203ENST00000378513 PPP4R2Q9NY27 417 aa20.96■□□□□ 0.95
RER1-203ENST00000378513 DHX29Q7Z478 1369 aaKnown RBP20.96■□□□□ 0.95
RER1-203ENST00000378513 TMC1Q8TDI8 760 aa20.95■□□□□ 0.94
RER1-203ENST00000378513 C9orf84Q5VXU9 1444 aa20.94■□□□□ 0.94
RER1-203ENST00000378513 BCORL1Q5H9F3 1711 aa20.94■□□□□ 0.94
RER1-203ENST00000378513 ATP10BO94823 1461 aa20.93■□□□□ 0.94
RER1-203ENST00000378513 KIF15Q9NS87 1388 aa20.92■□□□□ 0.94
RER1-203ENST00000378513 MAGI1Q96QZ7 1491 aaPredicted RBP20.91■□□□□ 0.94
RER1-203ENST00000378513 NBPF1Q3BBV0 1214 aa20.9■□□□□ 0.94
RER1-203ENST00000378513 MBD5Q9P267 1494 aa20.86■□□□□ 0.93
RER1-203ENST00000378513 PNISRQ8TF01 805 aaKnown RBP20.84■□□□□ 0.93
RER1-203ENST00000378513 PTPRGP23470 1445 aa20.84■□□□□ 0.93
RER1-203ENST00000378513 ROCK2O75116 1388 aaKnown RBP20.84■□□□□ 0.93
RER1-203ENST00000378513 ITSN2Q9NZM3 1697 aa20.84■□□□□ 0.93
RER1-203ENST00000378513 NUP160Q12769 1436 aa20.84■□□□□ 0.93
RER1-203ENST00000378513 ADGRL2O95490 1459 aa20.83■□□□□ 0.92
RER1-203ENST00000378513 ABCC10Q5T3U5 1492 aa20.81■□□□□ 0.92
RER1-203ENST00000378513 CC2D1BQ5T0F9 858 aaKnown RBP20.81■□□□□ 0.92
RER1-203ENST00000378513 NUDCQ9Y266 331 aa20.81■□□□□ 0.92
RER1-203ENST00000378513 CDC42BPAQ5VT25 1732 aa20.81■□□□□ 0.92
RER1-203ENST00000378513 NBR1Q14596 966 aa20.8■□□□□ 0.92
RER1-203ENST00000378513 ADGBQ8N7X0 1667 aa20.8■□□□□ 0.92
RER1-203ENST00000378513 CCDC136Q96JN2 1154 aa20.79■□□□□ 0.92
RER1-203ENST00000378513 KDM5CP41229 1560 aa20.78■□□□□ 0.92
RER1-203ENST00000378513 CROCC2H7BZ55 1655 aa20.76■□□□□ 0.91
RER1-203ENST00000378513 ABCA8O94911 1581 aa20.75■□□□□ 0.91
RER1-203ENST00000378513 RALGAPBQ86X10 1494 aa20.73■□□□□ 0.91
RER1-203ENST00000378513 ADCY10Q96PN6 1610 aa20.73■□□□□ 0.91
RER1-203ENST00000378513 CDCA7LQ96GN5 454 aa20.71■□□□□ 0.91
RER1-203ENST00000378513 CCDC144AA2RUR9 1427 aa20.71■□□□□ 0.91
RER1-203ENST00000378513 SMG6Q86US8 1419 aaKnown RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms