RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 MORC1Q86VD1 984 aa14.57□□□□□ -0.08
RPGR-203ENST00000378505 ROCK2O75116 1388 aaKnown RBP14.57□□□□□ -0.08
RPGR-203ENST00000378505 RSPH4AQ5TD94 716 aa14.56□□□□□ -0.08
RPGR-203ENST00000378505 CCDC18Q5T9S5 1454 aa14.56□□□□□ -0.08
RPGR-203ENST00000378505 NCLP19338 710 aaKnown RBP14.56□□□□□ -0.08
RPGR-203ENST00000378505 CASC1Q6TDU7 716 aa14.55□□□□□ -0.08
RPGR-203ENST00000378505 RCAN3Q9UKA8 241 aa14.55□□□□□ -0.08
RPGR-203ENST00000378505 GLIPR1L2Q4G1C9 344 aa14.55□□□□□ -0.08
RPGR-203ENST00000378505 TRIM44Q96DX7 344 aaPredicted RBP14.54□□□□□ -0.08
RPGR-203ENST00000378505 PLEKHG5O94827 1062 aa14.53□□□□□ -0.08
RPGR-203ENST00000378505 SRPK2P78362 688 aaKnown RBP14.53□□□□□ -0.08
RPGR-203ENST00000378505 GGT6Q6P531 493 aa14.53□□□□□ -0.08
RPGR-203ENST00000378505 NLRP13Q86W25 1043 aa14.51□□□□□ -0.09
RPGR-203ENST00000378505 JPH4Q96JJ6 628 aa14.5□□□□□ -0.09
RPGR-203ENST00000378505 HNRNPMP52272 730 aaKnown RBP eCLIP14.5□□□□□ -0.09
RPGR-203ENST00000378505 TSHZ2Q9NRE2 1034 aa14.5□□□□□ -0.09
RPGR-203ENST00000378505 IGF1RP08069 1367 aa14.5□□□□□ -0.09
RPGR-203ENST00000378505 HDGFP51858 240 aaKnown RBP14.49□□□□□ -0.09
RPGR-203ENST00000378505 FANCD2Q9BXW9 1451 aa14.49□□□□□ -0.09
RPGR-203ENST00000378505 TCERG1O14776 1098 aaKnown RBP14.47□□□□□ -0.09
RPGR-203ENST00000378505 SAFB2Q14151 953 aaKnown RBP eCLIP14.47□□□□□ -0.09
RPGR-203ENST00000378505 PDE3BQ13370 1112 aa14.47□□□□□ -0.09
RPGR-203ENST00000378505 HAP1P54257 671 aaPredicted RBP14.46□□□□□ -0.1
RPGR-203ENST00000378505 KIF3BO15066 747 aa14.45□□□□□ -0.1
RPGR-203ENST00000378505 U2AF1L5P0DN76 240 aaPredicted RBP14.44□□□□□ -0.1
RPGR-203ENST00000378505 U2AF1Q01081 240 aaKnown RBP eCLIP14.44□□□□□ -0.1
RPGR-203ENST00000378505 HDGFL2Q7Z4V5 671 aaPredicted RBP14.44□□□□□ -0.1
RPGR-203ENST00000378505 PRKRIP1Q9H875 184 aaPredicted RBP14.44□□□□□ -0.1
RPGR-203ENST00000378505 STK26Q9P289 416 aa14.43□□□□□ -0.1
RPGR-203ENST00000378505 EIF3AQ14152 1382 aaKnown RBP14.43□□□□□ -0.1
RPGR-203ENST00000378505 IPO8O15397 1037 aaKnown RBP14.43□□□□□ -0.1
RPGR-203ENST00000378505 HSP90AB1P08238 724 aaKnown RBP14.43□□□□□ -0.1
RPGR-203ENST00000378505 SPAG9O60271 1321 aaKnown RBP14.43□□□□□ -0.1
RPGR-203ENST00000378505 ST20-MTHFSA0A0A6YYL1 179 aa14.43□□□□□ -0.1
RPGR-203ENST00000378505 A0A0G2JS52 829 aa14.42□□□□□ -0.1
RPGR-203ENST00000378505 GOLGA2Q08379 1002 aa14.42□□□□□ -0.1
RPGR-203ENST00000378505 MLECQ14165 292 aa14.41□□□□□ -0.1
RPGR-203ENST00000378505 PHLDB1Q86UU1 1377 aa14.41□□□□□ -0.1
RPGR-203ENST00000378505 KIF15Q9NS87 1388 aa14.41□□□□□ -0.1
RPGR-203ENST00000378505 LMOD2Q6P5Q4 547 aa14.4□□□□□ -0.1
RPGR-203ENST00000378505 HSCBQ8IWL3 235 aa14.4□□□□□ -0.1
RPGR-203ENST00000378505 FGD5Q6ZNL6 1462 aa14.4□□□□□ -0.1
RPGR-203ENST00000378505 KIF21BO75037 1637 aa14.39□□□□□ -0.11
RPGR-203ENST00000378505 MYBBP1AQ9BQG0 1328 aaKnown RBP14.39□□□□□ -0.11
RPGR-203ENST00000378505 RWDD1Q9H446 243 aaPredicted RBP14.39□□□□□ -0.11
RPGR-203ENST00000378505 PTMAP06454 111 aaKnown RBP14.38□□□□□ -0.11
RPGR-203ENST00000378505 CALD1Q05682 793 aaKnown RBP14.38□□□□□ -0.11
RPGR-203ENST00000378505 DEKP35659 375 aaKnown RBP14.38□□□□□ -0.11
RPGR-203ENST00000378505 CFAP44Q96MT7 982 aa14.38□□□□□ -0.11
RPGR-203ENST00000378505 CCDC144AA2RUR9 1427 aa14.38□□□□□ -0.11
RPGR-203ENST00000378505 FGD6Q6ZV73 1430 aa14.36□□□□□ -0.11
RPGR-203ENST00000378505 NCAPD3P42695 1498 aa14.36□□□□□ -0.11
RPGR-203ENST00000378505 OS9Q13438 667 aaPredicted RBP14.36□□□□□ -0.11
RPGR-203ENST00000378505 SOX12O15370 315 aa14.36□□□□□ -0.11
RPGR-203ENST00000378505 ZBED9Q6R2W3 1325 aa14.36□□□□□ -0.11
RPGR-203ENST00000378505 USP47Q96K76 1375 aa14.35□□□□□ -0.11
RPGR-203ENST00000378505 GAPVD1Q14C86 1478 aa14.35□□□□□ -0.11
RPGR-203ENST00000378505 TERF2IPQ9NYB0 399 aa14.34□□□□□ -0.11
RPGR-203ENST00000378505 ZRSR1Q15695 479 aaKnown RBP14.34□□□□□ -0.11
RPGR-203ENST00000378505 RTF1Q92541 710 aaKnown RBP14.34□□□□□ -0.11
RPGR-203ENST00000378505 PANK3Q9H999 370 aa14.34□□□□□ -0.11
RPGR-203ENST00000378505 PMFBP1Q8TBY8 1022 aa14.33□□□□□ -0.11
RPGR-203ENST00000378505 MYOM3Q5VTT5 1437 aa14.33□□□□□ -0.12
RPGR-203ENST00000378505 IPO9Q96P70 1041 aaKnown RBP14.33□□□□□ -0.12
RPGR-203ENST00000378505 LRRC9Q6ZRR7 1453 aa14.33□□□□□ -0.12
RPGR-203ENST00000378505 PTPRGP23470 1445 aa14.33□□□□□ -0.12
RPGR-203ENST00000378505 UACAQ9BZF9 1416 aa14.33□□□□□ -0.12
RPGR-203ENST00000378505 ITPRIPQ8IWB1 547 aa14.32□□□□□ -0.12
RPGR-203ENST00000378505 RAD54L2Q9Y4B4 1467 aa14.31□□□□□ -0.12
RPGR-203ENST00000378505 KCNJ4P48050 445 aa14.31□□□□□ -0.12
RPGR-203ENST00000378505 WASHC2CQ9Y4E1 1318 aa14.31□□□□□ -0.12
RPGR-203ENST00000378505 CCDC146Q8IYE0 955 aa14.31□□□□□ -0.12
RPGR-203ENST00000378505 RTN4Q9NQC3 1192 aaKnown RBP14.31□□□□□ -0.12
RPGR-203ENST00000378505 L1TD1Q5T7N2 865 aaKnown RBP14.31□□□□□ -0.12
RPGR-203ENST00000378505 CENPJQ9HC77 1338 aaPredicted RBP14.31□□□□□ -0.12
RPGR-203ENST00000378505 MCCP23508 829 aa14.3□□□□□ -0.12
RPGR-203ENST00000378505 SMC4Q9NTJ3 1288 aa14.29□□□□□ -0.12
RPGR-203ENST00000378505 TPRNQ4KMQ1 711 aa14.29□□□□□ -0.12
RPGR-203ENST00000378505 DNTTIP2Q5QJE6 756 aaKnown RBP14.29□□□□□ -0.12
RPGR-203ENST00000378505 ERICH3Q5RHP9 1530 aa14.28□□□□□ -0.12
RPGR-203ENST00000378505 FGD1P98174 961 aa14.28□□□□□ -0.12
RPGR-203ENST00000378505 TRAK1Q9UPV9 953 aa14.28□□□□□ -0.12
RPGR-203ENST00000378505 SPRYD3Q8NCJ5 442 aa14.28□□□□□ -0.12
RPGR-203ENST00000378505 CASKIN1Q8WXD9 1431 aa14.27□□□□□ -0.12
RPGR-203ENST00000378505 CUX1P39880 1505 aa14.27□□□□□ -0.13
RPGR-203ENST00000378505 CLUAP1Q96AJ1 413 aa14.27□□□□□ -0.13
RPGR-203ENST00000378505 ARAP1Q96P48 1450 aa14.27□□□□□ -0.13
RPGR-203ENST00000378505 RRBP1Q9P2E9 1410 aaKnown RBP14.26□□□□□ -0.13
RPGR-203ENST00000378505 CCDC7Q96M83 1385 aa14.26□□□□□ -0.13
RPGR-203ENST00000378505 NAP1L5Q96NT1 182 aaPredicted RBP14.26□□□□□ -0.13
RPGR-203ENST00000378505 SLKQ9H2G2 1235 aaPredicted RBP14.25□□□□□ -0.13
RPGR-203ENST00000378505 ZNF644Q9H582 1327 aaPredicted RBP14.25□□□□□ -0.13
RPGR-203ENST00000378505 RRP1P56182 461 aaKnown RBP14.25□□□□□ -0.13
RPGR-203ENST00000378505 APBB1O00213 710 aa14.25□□□□□ -0.13
RPGR-203ENST00000378505 PLCB2Q00722 1185 aa14.24□□□□□ -0.13
RPGR-203ENST00000378505 CHMP4AQ9BY43 222 aa14.24□□□□□ -0.13
RPGR-203ENST00000378505 KIF7Q2M1P5 1343 aa14.23□□□□□ -0.13
RPGR-203ENST00000378505 GBP4Q96PP9 640 aa14.23□□□□□ -0.13
RPGR-203ENST00000378505 NUTM2DQ5VT03 806 aaPredicted RBP14.23□□□□□ -0.13
RPGR-203ENST00000378505 CENPQQ7L2Z9 268 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms