RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 MS4A1P11836 297 aa18.65■□□□□ 0.58
PRDM16-203ENST00000378391 DNTTIP2Q5QJE6 756 aaKnown RBP18.65■□□□□ 0.58
PRDM16-203ENST00000378391 CHMP4BQ9H444 224 aaKnown RBP18.64■□□□□ 0.58
PRDM16-203ENST00000378391 NUDCQ9Y266 331 aa18.64■□□□□ 0.57
PRDM16-203ENST00000378391 MPHOSPH9Q99550 1183 aa18.62■□□□□ 0.57
PRDM16-203ENST00000378391 NEUROD2Q15784 382 aa18.62■□□□□ 0.57
PRDM16-203ENST00000378391 MAPK8IP3Q9UPT6 1336 aa18.61■□□□□ 0.57
PRDM16-203ENST00000378391 IPO9Q96P70 1041 aaKnown RBP18.61■□□□□ 0.57
PRDM16-203ENST00000378391 L3MBTL2Q969R5 705 aa18.61■□□□□ 0.57
PRDM16-203ENST00000378391 FRAT1Q92837 279 aaPredicted RBP18.6■□□□□ 0.57
PRDM16-203ENST00000378391 PKNOX2Q96KN3 472 aa18.6■□□□□ 0.57
PRDM16-203ENST00000378391 PRKRIP1Q9H875 184 aaPredicted RBP18.59■□□□□ 0.57
PRDM16-203ENST00000378391 APPP05067 770 aa18.59■□□□□ 0.57
PRDM16-203ENST00000378391 ZBED9Q6R2W3 1325 aa18.59■□□□□ 0.57
PRDM16-203ENST00000378391 IGF1RP08069 1367 aa18.59■□□□□ 0.57
PRDM16-203ENST00000378391 PLPPR3Q6T4P5 718 aa18.58■□□□□ 0.56
PRDM16-203ENST00000378391 ZRSR1Q15695 479 aaKnown RBP18.57■□□□□ 0.56
PRDM16-203ENST00000378391 CC2D1BQ5T0F9 858 aaKnown RBP18.56■□□□□ 0.56
PRDM16-203ENST00000378391 TMF1P82094 1093 aa18.55■□□□□ 0.56
PRDM16-203ENST00000378391 MSH5O43196 834 aa18.55■□□□□ 0.56
PRDM16-203ENST00000378391 TIAM1Q13009 1591 aa18.54■□□□□ 0.56
PRDM16-203ENST00000378391 HSP90AB1P08238 724 aaKnown RBP18.54■□□□□ 0.56
PRDM16-203ENST00000378391 L1TD1Q5T7N2 865 aaKnown RBP18.54■□□□□ 0.56
PRDM16-203ENST00000378391 UACAQ9BZF9 1416 aa18.53■□□□□ 0.56
PRDM16-203ENST00000378391 FGD6Q6ZV73 1430 aa18.52■□□□□ 0.56
PRDM16-203ENST00000378391 WASHC2AQ641Q2 1341 aa18.51■□□□□ 0.55
PRDM16-203ENST00000378391 ARID4BQ4LE39 1312 aaPredicted RBP18.51■□□□□ 0.55
PRDM16-203ENST00000378391 DCAF11Q8TEB1 546 aa18.5■□□□□ 0.55
PRDM16-203ENST00000378391 PNNQ9H307 717 aaKnown RBP18.5■□□□□ 0.55
PRDM16-203ENST00000378391 HSCBQ8IWL3 235 aa18.49■□□□□ 0.55
PRDM16-203ENST00000378391 CNTLNQ9NXG0 1405 aa18.49■□□□□ 0.55
PRDM16-203ENST00000378391 TCERG1O14776 1098 aaKnown RBP18.48■□□□□ 0.55
PRDM16-203ENST00000378391 CUX1P39880 1505 aa18.46■□□□□ 0.55
PRDM16-203ENST00000378391 C14orf37Q86TY3 774 aa18.46■□□□□ 0.55
PRDM16-203ENST00000378391 RCAN3Q9UKA8 241 aa18.46■□□□□ 0.55
PRDM16-203ENST00000378391 SENP3Q9H4L4 574 aaPredicted RBP18.45■□□□□ 0.54
PRDM16-203ENST00000378391 MAPKBP1O60336 1514 aa18.45■□□□□ 0.54
PRDM16-203ENST00000378391 CADPSQ9ULU8 1353 aa18.44■□□□□ 0.54
PRDM16-203ENST00000378391 CCDC7Q96M83 1385 aa18.44■□□□□ 0.54
PRDM16-203ENST00000378391 U2SURPO15042 1029 aaKnown RBP18.43■□□□□ 0.54
PRDM16-203ENST00000378391 CFAP44Q96MT7 982 aa18.43■□□□□ 0.54
PRDM16-203ENST00000378391 FGD5Q6ZNL6 1462 aa18.43■□□□□ 0.54
PRDM16-203ENST00000378391 POGKQ9P215 609 aa18.42■□□□□ 0.54
PRDM16-203ENST00000378391 ZBTB7CA1YPR0 619 aa18.42■□□□□ 0.54
PRDM16-203ENST00000378391 PLCB2Q00722 1185 aa18.42■□□□□ 0.54
PRDM16-203ENST00000378391 HSP90AA2PQ14568 343 aaPredicted RBP18.42■□□□□ 0.54
PRDM16-203ENST00000378391 KTN1Q86UP2 1357 aaKnown RBP18.41■□□□□ 0.54
PRDM16-203ENST00000378391 CASKIN1Q8WXD9 1431 aa18.4■□□□□ 0.54
PRDM16-203ENST00000378391 RALBP1Q15311 655 aa18.4■□□□□ 0.54
PRDM16-203ENST00000378391 TPRNQ4KMQ1 711 aa18.4■□□□□ 0.54
PRDM16-203ENST00000378391 PKD2Q13563 968 aa18.39■□□□□ 0.53
PRDM16-203ENST00000378391 FYCO1Q9BQS8 1478 aa18.39■□□□□ 0.53
PRDM16-203ENST00000378391 MYOM3Q5VTT5 1437 aa18.39■□□□□ 0.53
PRDM16-203ENST00000378391 MSNP26038 577 aaKnown RBP18.38■□□□□ 0.53
PRDM16-203ENST00000378391 NRDCO43847 1150 aa18.38■□□□□ 0.53
PRDM16-203ENST00000378391 CCDC184Q52MB2 194 aa18.37■□□□□ 0.53
PRDM16-203ENST00000378391 GOLGA6L6A8MZA4 724 aa18.37■□□□□ 0.53
PRDM16-203ENST00000378391 TDRD9Q8NDG6 1382 aaKnown RBP18.37■□□□□ 0.53
PRDM16-203ENST00000378391 KIF7Q2M1P5 1343 aa18.37■□□□□ 0.53
PRDM16-203ENST00000378391 HAP1P54257 671 aaPredicted RBP18.36■□□□□ 0.53
PRDM16-203ENST00000378391 MORC1Q86VD1 984 aa18.35■□□□□ 0.53
PRDM16-203ENST00000378391 PAK3O75914 559 aaPredicted RBP18.35■□□□□ 0.53
PRDM16-203ENST00000378391 CHAF1AQ13111 956 aaPredicted RBP18.34■□□□□ 0.53
PRDM16-203ENST00000378391 PDE4AP27815 886 aa18.34■□□□□ 0.53
PRDM16-203ENST00000378391 PEG3Q9GZU2 1588 aa18.34■□□□□ 0.53
PRDM16-203ENST00000378391 EXOC6Q8TAG9 804 aa18.34■□□□□ 0.53
PRDM16-203ENST00000378391 HFM1A2PYH4 1435 aa18.33■□□□□ 0.53
PRDM16-203ENST00000378391 NCOA2Q15596 1464 aa18.33■□□□□ 0.53
PRDM16-203ENST00000378391 MCCP23508 829 aa18.33■□□□□ 0.52
PRDM16-203ENST00000378391 MAP3K1Q13233 1512 aa18.33■□□□□ 0.52
PRDM16-203ENST00000378391 BIVM-ERCC5R4GMW8 1640 aa18.32■□□□□ 0.52
PRDM16-203ENST00000378391 GOLGA6L4A6NEF3 574 aa18.32■□□□□ 0.52
PRDM16-203ENST00000378391 IPO8O15397 1037 aaKnown RBP18.32■□□□□ 0.52
PRDM16-203ENST00000378391 RRP1P56182 461 aaKnown RBP18.32■□□□□ 0.52
PRDM16-203ENST00000378391 KCNJ4P48050 445 aa18.32■□□□□ 0.52
PRDM16-203ENST00000378391 FGD1P98174 961 aa18.32■□□□□ 0.52
PRDM16-203ENST00000378391 OS9Q13438 667 aaPredicted RBP18.32■□□□□ 0.52
PRDM16-203ENST00000378391 GBP4Q96PP9 640 aa18.32■□□□□ 0.52
PRDM16-203ENST00000378391 ARID3AQ99856 593 aa18.31■□□□□ 0.52
PRDM16-203ENST00000378391 NCAPD3P42695 1498 aa18.31■□□□□ 0.52
PRDM16-203ENST00000378391 ROCK2O75116 1388 aaKnown RBP18.31■□□□□ 0.52
PRDM16-203ENST00000378391 CFTRP13569 1480 aa18.31■□□□□ 0.52
PRDM16-203ENST00000378391 USP35Q9P2H5 1018 aa18.31■□□□□ 0.52
PRDM16-203ENST00000378391 RWDD1Q9H446 243 aaPredicted RBP18.31■□□□□ 0.52
PRDM16-203ENST00000378391 PLEKHG5O94827 1062 aa18.3■□□□□ 0.52
PRDM16-203ENST00000378391 KIF15Q9NS87 1388 aa18.3■□□□□ 0.52
PRDM16-203ENST00000378391 A0A0G2JS52 829 aa18.3■□□□□ 0.52
PRDM16-203ENST00000378391 PCF11O94913 1555 aaKnown RBP18.3■□□□□ 0.52
PRDM16-203ENST00000378391 KANK1Q14678 1352 aa18.3■□□□□ 0.52
PRDM16-203ENST00000378391 USP47Q96K76 1375 aa18.3■□□□□ 0.52
PRDM16-203ENST00000378391 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.29■□□□□ 0.52
PRDM16-203ENST00000378391 AKNAQ7Z591 1439 aa18.29■□□□□ 0.52
PRDM16-203ENST00000378391 PDE3BQ13370 1112 aa18.29■□□□□ 0.52
PRDM16-203ENST00000378391 UNC13AQ9UPW8 1703 aa18.29■□□□□ 0.52
PRDM16-203ENST00000378391 SPRYD3Q8NCJ5 442 aa18.29■□□□□ 0.52
PRDM16-203ENST00000378391 MYBBP1AQ9BQG0 1328 aaKnown RBP18.28■□□□□ 0.52
PRDM16-203ENST00000378391 RAD54L2Q9Y4B4 1467 aa18.28■□□□□ 0.52
PRDM16-203ENST00000378391 BICRAQ9NZM4 1560 aa18.28■□□□□ 0.52
PRDM16-203ENST00000378391 RSPH6AQ9H0K4 717 aa18.28■□□□□ 0.52
PRDM16-203ENST00000378391 FANCD2Q9BXW9 1451 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms