RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 SUPT16HQ9Y5B9 1047 aaKnown RBP15.44■□□□□ 0.06
PCDHGA1-201ENST00000378105 GLI2P10070 1586 aa15.44■□□□□ 0.06
PCDHGA1-201ENST00000378105 FYCO1Q9BQS8 1478 aa15.44■□□□□ 0.06
PCDHGA1-201ENST00000378105 ADGBQ8N7X0 1667 aa15.43■□□□□ 0.06
PCDHGA1-201ENST00000378105 ITSN2Q9NZM3 1697 aa15.42■□□□□ 0.06
PCDHGA1-201ENST00000378105 SUPT6HQ7KZ85 1726 aaKnown RBP15.42■□□□□ 0.06
PCDHGA1-201ENST00000378105 CHMP7Q8WUX9 453 aaPredicted RBP15.42■□□□□ 0.06
PCDHGA1-201ENST00000378105 HECW1Q76N89 1606 aa15.41■□□□□ 0.06
PCDHGA1-201ENST00000378105 BCL11BQ9C0K0 894 aaPredicted RBP15.4■□□□□ 0.06
PCDHGA1-201ENST00000378105 CLIP1P30622 1438 aa15.4■□□□□ 0.06
PCDHGA1-201ENST00000378105 PLB1Q6P1J6 1458 aa15.39■□□□□ 0.05
PCDHGA1-201ENST00000378105 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.38■□□□□ 0.05
PCDHGA1-201ENST00000378105 CDK13Q14004 1512 aaKnown RBP15.37■□□□□ 0.05
PCDHGA1-201ENST00000378105 CASKIN1Q8WXD9 1431 aa15.36■□□□□ 0.05
PCDHGA1-201ENST00000378105 PDIA4P13667 645 aaKnown RBP15.35■□□□□ 0.05
PCDHGA1-201ENST00000378105 NBR1Q14596 966 aa15.35■□□□□ 0.05
PCDHGA1-201ENST00000378105 SAMD9LQ8IVG5 1584 aa15.35■□□□□ 0.05
PCDHGA1-201ENST00000378105 VSIG10Q8N0Z9 540 aa15.34■□□□□ 0.05
PCDHGA1-201ENST00000378105 MYO5CQ9NQX4 1742 aa15.34■□□□□ 0.05
PCDHGA1-201ENST00000378105 MSH5O43196 834 aa15.33■□□□□ 0.04
PCDHGA1-201ENST00000378105 ZNF777Q9ULD5 760 aaPredicted RBP15.33■□□□□ 0.04
PCDHGA1-201ENST00000378105 EPRSP07814 1512 aaKnown RBP15.33■□□□□ 0.04
PCDHGA1-201ENST00000378105 NEFLP07196 543 aa15.32■□□□□ 0.04
PCDHGA1-201ENST00000378105 RBM19Q9Y4C8 960 aaKnown RBP15.32■□□□□ 0.04
PCDHGA1-201ENST00000378105 ATP10BO94823 1461 aa15.32■□□□□ 0.04
PCDHGA1-201ENST00000378105 KDM6BO15054 1643 aa15.31■□□□□ 0.04
PCDHGA1-201ENST00000378105 MROH1Q8NDA8 1641 aa15.31■□□□□ 0.04
PCDHGA1-201ENST00000378105 TRIM52Q96A61 297 aa15.3■□□□□ 0.04
PCDHGA1-201ENST00000378105 DEPDC5O75140 1603 aa15.3■□□□□ 0.04
PCDHGA1-201ENST00000378105 ZMYND15Q9H091 742 aa15.3■□□□□ 0.04
PCDHGA1-201ENST00000378105 FHOD3Q2V2M9 1422 aa15.3■□□□□ 0.04
PCDHGA1-201ENST00000378105 GCC2Q8IWJ2 1684 aa15.29■□□□□ 0.04
PCDHGA1-201ENST00000378105 DENND4BO75064 1496 aaPredicted RBP15.29■□□□□ 0.04
PCDHGA1-201ENST00000378105 VPS8Q8N3P4 1428 aa15.29■□□□□ 0.04
PCDHGA1-201ENST00000378105 ARAP3Q8WWN8 1544 aa15.28■□□□□ 0.04
PCDHGA1-201ENST00000378105 INO80Q9ULG1 1556 aaPredicted RBP15.28■□□□□ 0.04
PCDHGA1-201ENST00000378105 POLR3GLQ9BT43 218 aa15.27■□□□□ 0.03
PCDHGA1-201ENST00000378105 TCOF1Q13428 1488 aaKnown RBP15.26■□□□□ 0.03
PCDHGA1-201ENST00000378105 KDM5CP41229 1560 aa15.26■□□□□ 0.03
PCDHGA1-201ENST00000378105 PLXNC1O60486 1568 aa15.25■□□□□ 0.03
PCDHGA1-201ENST00000378105 ARHGEF12Q9NZN5 1544 aa15.25■□□□□ 0.03
PCDHGA1-201ENST00000378105 MAST1Q9Y2H9 1570 aa15.24■□□□□ 0.03
PCDHGA1-201ENST00000378105 PRG4Q92954 1404 aaPredicted RBP15.24■□□□□ 0.03
PCDHGA1-201ENST00000378105 KIDINS220Q9ULH0 1771 aa15.24■□□□□ 0.03
PCDHGA1-201ENST00000378105 CNGB1Q14028 1251 aaPredicted RBP15.23■□□□□ 0.03
PCDHGA1-201ENST00000378105 MIER1Q8N108 512 aa15.21■□□□□ 0.03
PCDHGA1-201ENST00000378105 LRRC9Q6ZRR7 1453 aa15.21■□□□□ 0.03
PCDHGA1-201ENST00000378105 DNMT1P26358 1616 aaKnown RBP15.2■□□□□ 0.02
PCDHGA1-201ENST00000378105 CDK11AQ9UQ88 783 aaPredicted RBP15.18■□□□□ 0.02
PCDHGA1-201ENST00000378105 EHBP1L1Q8N3D4 1523 aa15.18■□□□□ 0.02
PCDHGA1-201ENST00000378105 ERICH6BQ5W0A0 696 aa15.16■□□□□ 0.02
PCDHGA1-201ENST00000378105 ABCC1P33527 1531 aa15.16■□□□□ 0.02
PCDHGA1-201ENST00000378105 NPM1P06748 294 aaKnown RBP eCLIP15.15■□□□□ 0.02
PCDHGA1-201ENST00000378105 RBM10P98175 930 aaKnown RBP15.15■□□□□ 0.02
PCDHGA1-201ENST00000378105 ARHGEF5Q12774 1597 aa15.14■□□□□ 0.01
PCDHGA1-201ENST00000378105 FGD1P98174 961 aa15.14■□□□□ 0.01
PCDHGA1-201ENST00000378105 VWDEQ8N2E2 1590 aa15.14■□□□□ 0.01
PCDHGA1-201ENST00000378105 ZMYM4Q5VZL5 1548 aa15.14■□□□□ 0.01
PCDHGA1-201ENST00000378105 ABCA6Q8N139 1617 aa15.12■□□□□ 0.01
PCDHGA1-201ENST00000378105 MBD5Q9P267 1494 aa15.12■□□□□ 0.01
PCDHGA1-201ENST00000378105 CHIC2Q9UKJ5 165 aa15.11■□□□□ 0.01
PCDHGA1-201ENST00000378105 RRBP1Q9P2E9 1410 aaKnown RBP15.11■□□□□ 0.01
PCDHGA1-201ENST00000378105 PTPRKQ15262 1439 aa15.11■□□□□ 0.01
PCDHGA1-201ENST00000378105 PTPN23Q9H3S7 1636 aa15.11■□□□□ 0.01
PCDHGA1-201ENST00000378105 KCNH8Q96L42 1107 aa15.1■□□□□ 0.01
PCDHGA1-201ENST00000378105 ZNF326Q5BKZ1 582 aaKnown RBP15.1■□□□□ 0.01
PCDHGA1-201ENST00000378105 MAGI2Q86UL8 1455 aa15.1■□□□□ 0.01
PCDHGA1-201ENST00000378105 CCDC18Q5T9S5 1454 aa15.09■□□□□ 0.01
PCDHGA1-201ENST00000378105 PAXIP1Q6ZW49 1069 aaPredicted RBP15.09■□□□□ 0.01
PCDHGA1-201ENST00000378105 DHX37Q8IY37 1157 aaKnown RBP15.08■□□□□ 0.01
PCDHGA1-201ENST00000378105 REREQ9P2R6 1566 aa15.08■□□□□ 0.01
PCDHGA1-201ENST00000378105 RNF17Q9BXT8 1623 aaKnown RBP15.08■□□□□ 0
PCDHGA1-201ENST00000378105 PLPPR3Q6T4P5 718 aa15.08■□□□□ 0
PCDHGA1-201ENST00000378105 UACAQ9BZF9 1416 aa15.07■□□□□ 0
PCDHGA1-201ENST00000378105 MTUS2Q5JR59 1369 aa15.06■□□□□ 0
PCDHGA1-201ENST00000378105 UNC13BO14795 1591 aa15.05■□□□□ 0
PCDHGA1-201ENST00000378105 IFT172Q9UG01 1749 aa15.05■□□□□ 0
PCDHGA1-201ENST00000378105 ZFYVE16Q7Z3T8 1539 aa15.05■□□□□ -0
PCDHGA1-201ENST00000378105 GPATCH8Q9UKJ3 1502 aaKnown RBP15.04■□□□□ -0
PCDHGA1-201ENST00000378105 GLIPR1L2Q4G1C9 344 aa15.04■□□□□ -0
PCDHGA1-201ENST00000378105 COL17A1Q9UMD9 1497 aaPredicted RBP15.03■□□□□ -0
PCDHGA1-201ENST00000378105 CLSPNQ9HAW4 1339 aa15.03■□□□□ -0
PCDHGA1-201ENST00000378105 AAMPQ13685 434 aa15.02■□□□□ -0
PCDHGA1-201ENST00000378105 WDR7Q9Y4E6 1490 aa15.01□□□□□ -0.01
PCDHGA1-201ENST00000378105 PHLDB1Q86UU1 1377 aa15.01□□□□□ -0.01
PCDHGA1-201ENST00000378105 FKBP8Q14318 412 aa14.98□□□□□ -0.01
PCDHGA1-201ENST00000378105 FMN1Q68DA7 1419 aa14.98□□□□□ -0.01
PCDHGA1-201ENST00000378105 EIF2AK4Q9P2K8 1649 aaKnown RBP14.98□□□□□ -0.01
PCDHGA1-201ENST00000378105 DIP2CQ9Y2E4 1556 aa14.97□□□□□ -0.01
PCDHGA1-201ENST00000378105 NCOA2Q15596 1464 aa14.96□□□□□ -0.01
PCDHGA1-201ENST00000378105 SLC4A1APQ9BWU0 796 aaKnown RBP14.96□□□□□ -0.01
PCDHGA1-201ENST00000378105 KDM5DQ9BY66 1539 aa14.96□□□□□ -0.01
PCDHGA1-201ENST00000378105 CFAP74Q9C0B2 1584 aa14.96□□□□□ -0.01
PCDHGA1-201ENST00000378105 SETD1AO15047 1707 aaKnown RBP14.96□□□□□ -0.01
PCDHGA1-201ENST00000378105 ADGRL2O95490 1459 aa14.96□□□□□ -0.02
PCDHGA1-201ENST00000378105 JPH4Q96JJ6 628 aa14.95□□□□□ -0.02
PCDHGA1-201ENST00000378105 PLEKHD1A6NEE1 506 aa14.95□□□□□ -0.02
PCDHGA1-201ENST00000378105 PIK3C2BO00750 1634 aa14.95□□□□□ -0.02
PCDHGA1-201ENST00000378105 TSPOAP1O95153 1857 aa14.94□□□□□ -0.02
PCDHGA1-201ENST00000378105 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms