RNA–Protein interactions for RNA: ENST00000377115.4

FOXA2-201, Transcript of forkhead box A2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXA2, Length 2,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-201ENST00000377115 MYT1LQ9UL68 1186 aa31.44■■■□□ 2.62
FOXA2-201ENST00000377115 DEKP35659 375 aaKnown RBP31.44■■■□□ 2.62
FOXA2-201ENST00000377115 KIF21AQ7Z4S6 1674 aa31.4■■■□□ 2.62
FOXA2-201ENST00000377115 NOP58Q9Y2X3 529 aaKnown RBP31.4■■■□□ 2.62
FOXA2-201ENST00000377115 TEX14Q8IWB6 1497 aa31.4■■■□□ 2.62
FOXA2-201ENST00000377115 URB2Q14146 1524 aaKnown RBP31.4■■■□□ 2.62
FOXA2-201ENST00000377115 GAPVD1Q14C86 1478 aa31.4■■■□□ 2.62
FOXA2-201ENST00000377115 RPRD2Q5VT52 1461 aaKnown RBP31.4■■■□□ 2.62
FOXA2-201ENST00000377115 SPATA31E1Q6ZUB1 1445 aa31.39■■■□□ 2.62
FOXA2-201ENST00000377115 ANKRD30BQ9BXX2 1392 aa31.39■■■□□ 2.62
FOXA2-201ENST00000377115 PAK3O75914 559 aaPredicted RBP31.36■■■□□ 2.61
FOXA2-201ENST00000377115 POLR1AO95602 1720 aaPredicted RBP31.36■■■□□ 2.61
FOXA2-201ENST00000377115 SMG6Q86US8 1419 aaKnown RBP31.34■■■□□ 2.61
FOXA2-201ENST00000377115 MIA2Q96PC5 1412 aa31.34■■■□□ 2.61
FOXA2-201ENST00000377115 LAMC3Q9Y6N6 1575 aa31.33■■■□□ 2.61
FOXA2-201ENST00000377115 EPRSP07814 1512 aaKnown RBP31.33■■■□□ 2.61
FOXA2-201ENST00000377115 CNGB1Q14028 1251 aaPredicted RBP31.33■■■□□ 2.61
FOXA2-201ENST00000377115 CDK13Q14004 1512 aaKnown RBP31.32■■■□□ 2.61
FOXA2-201ENST00000377115 NBR1Q14596 966 aa31.32■■■□□ 2.6
FOXA2-201ENST00000377115 ARID3CA6NKF2 412 aa31.31■■■□□ 2.6
FOXA2-201ENST00000377115 NUDCQ9Y266 331 aa31.26■■■□□ 2.6
FOXA2-201ENST00000377115 DHX29Q7Z478 1369 aaKnown RBP31.25■■■□□ 2.59
FOXA2-201ENST00000377115 CCDC136Q96JN2 1154 aa31.24■■■□□ 2.59
FOXA2-201ENST00000377115 DAPK1P53355 1430 aa31.23■■■□□ 2.59
FOXA2-201ENST00000377115 SLC4A1APQ9BWU0 796 aaKnown RBP31.23■■■□□ 2.59
FOXA2-201ENST00000377115 SENP3-EIF4A1A0A087X0R7 540 aa31.23■■■□□ 2.59
FOXA2-201ENST00000377115 RNF123Q5XPI4 1314 aa31.22■■■□□ 2.59
FOXA2-201ENST00000377115 ROCK1Q13464 1354 aa31.2■■■□□ 2.58
FOXA2-201ENST00000377115 POLR3GLQ9BT43 218 aa31.19■■■□□ 2.58
FOXA2-201ENST00000377115 ABCC5O15440 1437 aa31.17■■■□□ 2.58
FOXA2-201ENST00000377115 WDR62O43379 1518 aa31.15■■■□□ 2.58
FOXA2-201ENST00000377115 BCORL1Q5H9F3 1711 aa31.15■■■□□ 2.58
FOXA2-201ENST00000377115 ZNF644Q9H582 1327 aaPredicted RBP31.14■■■□□ 2.58
FOXA2-201ENST00000377115 ANP32AP39687 249 aaKnown RBP31.14■■■□□ 2.57
FOXA2-201ENST00000377115 DNMT1P26358 1616 aaKnown RBP31.13■■■□□ 2.57
FOXA2-201ENST00000377115 IPO9Q96P70 1041 aaKnown RBP31.13■■■□□ 2.57
FOXA2-201ENST00000377115 IQGAP2Q13576 1575 aa31.11■■■□□ 2.57
FOXA2-201ENST00000377115 USP47Q96K76 1375 aa31.1■■■□□ 2.57
FOXA2-201ENST00000377115 ZNF326Q5BKZ1 582 aaKnown RBP31.08■■■□□ 2.57
FOXA2-201ENST00000377115 MBD5Q9P267 1494 aa31.07■■■□□ 2.56
FOXA2-201ENST00000377115 PZPP20742 1482 aa31.06■■■□□ 2.56
FOXA2-201ENST00000377115 PNISRQ8TF01 805 aaKnown RBP31.05■■■□□ 2.56
FOXA2-201ENST00000377115 ZBTB47Q9UFB7 747 aaPredicted RBP31.03■■■□□ 2.56
FOXA2-201ENST00000377115 TARBP1Q13395 1621 aaKnown RBP31.01■■■□□ 2.55
FOXA2-201ENST00000377115 KDM5CP41229 1560 aa30.99■■■□□ 2.55
FOXA2-201ENST00000377115 TMC1Q8TDI8 760 aa30.99■■■□□ 2.55
FOXA2-201ENST00000377115 PBRM1Q86U86 1689 aa30.97■■■□□ 2.55
FOXA2-201ENST00000377115 KIF14Q15058 1648 aa30.97■■■□□ 2.55
FOXA2-201ENST00000377115 RTL5Q5HYW3 569 aaPredicted RBP30.95■■■□□ 2.55
FOXA2-201ENST00000377115 KIAA1107Q9UPP5 1409 aa30.93■■■□□ 2.54
FOXA2-201ENST00000377115 ARID4BQ4LE39 1312 aaPredicted RBP30.92■■■□□ 2.54
FOXA2-201ENST00000377115 ADAMTS12P58397 1594 aa30.9■■■□□ 2.54
FOXA2-201ENST00000377115 PDS5BQ9NTI5 1447 aa30.9■■■□□ 2.54
FOXA2-201ENST00000377115 PKD2Q13563 968 aa30.88■■■□□ 2.53
FOXA2-201ENST00000377115 LRPPRCP42704 1394 aaKnown RBP30.88■■■□□ 2.53
FOXA2-201ENST00000377115 NUP153P49790 1475 aaKnown RBP30.87■■■□□ 2.53
FOXA2-201ENST00000377115 RRP1P56182 461 aaKnown RBP30.86■■■□□ 2.53
FOXA2-201ENST00000377115 NPM2Q86SE8 214 aaKnown RBP30.86■■■□□ 2.53
FOXA2-201ENST00000377115 ROCK2O75116 1388 aaKnown RBP30.86■■■□□ 2.53
FOXA2-201ENST00000377115 EXOC6Q8TAG9 804 aa30.86■■■□□ 2.53
FOXA2-201ENST00000377115 CAMSAP2Q08AD1 1489 aa30.85■■■□□ 2.53
FOXA2-201ENST00000377115 KIF15Q9NS87 1388 aa30.85■■■□□ 2.53
FOXA2-201ENST00000377115 CARD11Q9BXL7 1154 aa30.81■■■□□ 2.52
FOXA2-201ENST00000377115 RALGAPBQ86X10 1494 aa30.81■■■□□ 2.52
FOXA2-201ENST00000377115 ADGBQ8N7X0 1667 aa30.81■■■□□ 2.52
FOXA2-201ENST00000377115 BRD4O60885 1362 aaPredicted RBP30.79■■■□□ 2.52
FOXA2-201ENST00000377115 MYBBP1AQ9BQG0 1328 aaKnown RBP30.79■■■□□ 2.52
FOXA2-201ENST00000377115 CFDP1Q9UEE9 299 aaPredicted RBP30.78■■■□□ 2.52
FOXA2-201ENST00000377115 UHRF1BP1Q6BDS2 1440 aa30.78■■■□□ 2.52
FOXA2-201ENST00000377115 KIAA0556O60303 1618 aa30.78■■■□□ 2.52
FOXA2-201ENST00000377115 SALL2Q9Y467 1007 aaPredicted RBP30.77■■■□□ 2.52
FOXA2-201ENST00000377115 PRG4Q92954 1404 aaPredicted RBP30.77■■■□□ 2.52
FOXA2-201ENST00000377115 DISP1Q96F81 1524 aa30.77■■■□□ 2.52
FOXA2-201ENST00000377115 RAPGEF6Q8TEU7 1601 aa30.76■■■□□ 2.52
FOXA2-201ENST00000377115 RCAN3Q9UKA8 241 aa30.76■■■□□ 2.51
FOXA2-201ENST00000377115 ZNF777Q9ULD5 760 aaPredicted RBP30.76■■■□□ 2.51
FOXA2-201ENST00000377115 TCERG1O14776 1098 aaKnown RBP30.75■■■□□ 2.51
FOXA2-201ENST00000377115 ST20-MTHFSA0A0A6YYL1 179 aa30.75■■■□□ 2.51
FOXA2-201ENST00000377115 PDE4AP27815 886 aa30.74■■■□□ 2.51
FOXA2-201ENST00000377115 ADGRL2O95490 1459 aa30.73■■■□□ 2.51
FOXA2-201ENST00000377115 RALBP1Q15311 655 aa30.72■■■□□ 2.51
FOXA2-201ENST00000377115 LAS1LQ9Y4W2 734 aaKnown RBP30.72■■■□□ 2.51
FOXA2-201ENST00000377115 CROCC2H7BZ55 1655 aa30.7■■■□□ 2.51
FOXA2-201ENST00000377115 TROQ12816 1431 aaPredicted RBP30.7■■■□□ 2.5
FOXA2-201ENST00000377115 KDM2AQ9Y2K7 1162 aa30.69■■■□□ 2.5
FOXA2-201ENST00000377115 GPATCH8Q9UKJ3 1502 aaKnown RBP30.69■■■□□ 2.5
FOXA2-201ENST00000377115 DNAJC5BQ9UF47 199 aa30.69■■■□□ 2.5
FOXA2-201ENST00000377115 ITSN2Q9NZM3 1697 aa30.68■■■□□ 2.5
FOXA2-201ENST00000377115 ANKRD50Q9ULJ7 1429 aa30.68■■■□□ 2.5
FOXA2-201ENST00000377115 KTN1Q86UP2 1357 aaKnown RBP30.68■■■□□ 2.5
FOXA2-201ENST00000377115 ANKRD30AQ9BXX3 1397 aa30.68■■■□□ 2.5
FOXA2-201ENST00000377115 BACH2Q9BYV9 841 aa30.67■■■□□ 2.5
FOXA2-201ENST00000377115 E9PCH4 1651 aa30.67■■■□□ 2.5
FOXA2-201ENST00000377115 KIAA0586Q9BVV6 1533 aa30.65■■■□□ 2.5
FOXA2-201ENST00000377115 ARHGEF12Q9NZN5 1544 aa30.64■■■□□ 2.5
FOXA2-201ENST00000377115 NEFMP07197 916 aa30.64■■■□□ 2.5
FOXA2-201ENST00000377115 IL27Q8NEV9 243 aa30.64■■■□□ 2.5
FOXA2-201ENST00000377115 NUP155O75694 1391 aa30.63■■■□□ 2.49
FOXA2-201ENST00000377115 CDCA7LQ96GN5 454 aa30.61■■■□□ 2.49
FOXA2-201ENST00000377115 MS4A1P11836 297 aa30.6■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms