RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 PRKRIP1Q9H875 184 aaPredicted RBP17.72■□□□□ 0.43
USP11-204ENST00000377107 PRG4Q92954 1404 aaPredicted RBP17.72■□□□□ 0.43
USP11-204ENST00000377107 ABCA5Q8WWZ7 1642 aa17.72■□□□□ 0.43
USP11-204ENST00000377107 RGL3Q3MIN7 710 aa17.72■□□□□ 0.43
USP11-204ENST00000377107 UGGT2Q9NYU1 1516 aa17.71■□□□□ 0.43
USP11-204ENST00000377107 IQGAP2Q13576 1575 aa17.71■□□□□ 0.43
USP11-204ENST00000377107 B4GALNT3Q6L9W6 998 aa17.71■□□□□ 0.43
USP11-204ENST00000377107 JPH4Q96JJ6 628 aa17.71■□□□□ 0.42
USP11-204ENST00000377107 TSPY4P0CV99 314 aa17.7■□□□□ 0.42
USP11-204ENST00000377107 TSPY10P0CW01 314 aa17.7■□□□□ 0.42
USP11-204ENST00000377107 ERICH6Q7L0X2 663 aa17.7■□□□□ 0.42
USP11-204ENST00000377107 SAMD9Q5K651 1589 aa17.69■□□□□ 0.42
USP11-204ENST00000377107 HNRNPMP52272 730 aaKnown RBP eCLIP17.69■□□□□ 0.42
USP11-204ENST00000377107 KDM6BO15054 1643 aa17.68■□□□□ 0.42
USP11-204ENST00000377107 KIF7Q2M1P5 1343 aa17.68■□□□□ 0.42
USP11-204ENST00000377107 HECW1Q76N89 1606 aa17.67■□□□□ 0.42
USP11-204ENST00000377107 CCDC7Q96M83 1385 aa17.67■□□□□ 0.42
USP11-204ENST00000377107 CARD11Q9BXL7 1154 aa17.66■□□□□ 0.42
USP11-204ENST00000377107 LRRIQ1Q96JM4 1722 aa17.66■□□□□ 0.42
USP11-204ENST00000377107 DCAF11Q8TEB1 546 aa17.65■□□□□ 0.42
USP11-204ENST00000377107 DAPK1P53355 1430 aa17.65■□□□□ 0.42
USP11-204ENST00000377107 MRC2Q9UBG0 1479 aa17.65■□□□□ 0.42
USP11-204ENST00000377107 ANP32EQ9BTT0 268 aa17.65■□□□□ 0.42
USP11-204ENST00000377107 ABCC5O15440 1437 aa17.64■□□□□ 0.41
USP11-204ENST00000377107 TMC1Q8TDI8 760 aa17.64■□□□□ 0.41
USP11-204ENST00000377107 NUP155O75694 1391 aa17.64■□□□□ 0.41
USP11-204ENST00000377107 PLB1Q6P1J6 1458 aa17.62■□□□□ 0.41
USP11-204ENST00000377107 MIA2Q96PC5 1412 aa17.62■□□□□ 0.41
USP11-204ENST00000377107 ANKRD30BQ9BXX2 1392 aa17.62■□□□□ 0.41
USP11-204ENST00000377107 CNTLNQ9NXG0 1405 aa17.61■□□□□ 0.41
USP11-204ENST00000377107 TARBP1Q13395 1621 aaKnown RBP17.6■□□□□ 0.41
USP11-204ENST00000377107 MYT1LQ9UL68 1186 aa17.6■□□□□ 0.41
USP11-204ENST00000377107 DENND4BO75064 1496 aaPredicted RBP17.59■□□□□ 0.41
USP11-204ENST00000377107 NUP153P49790 1475 aaKnown RBP17.57■□□□□ 0.4
USP11-204ENST00000377107 KIAA0586Q9BVV6 1533 aa17.56■□□□□ 0.4
USP11-204ENST00000377107 ST20-MTHFSA0A0A6YYL1 179 aa17.56■□□□□ 0.4
USP11-204ENST00000377107 USP47Q96K76 1375 aa17.55■□□□□ 0.4
USP11-204ENST00000377107 ANKRD30AQ9BXX3 1397 aa17.55■□□□□ 0.4
USP11-204ENST00000377107 TCOF1Q13428 1488 aaKnown RBP17.55■□□□□ 0.4
USP11-204ENST00000377107 WDR62O43379 1518 aa17.55■□□□□ 0.4
USP11-204ENST00000377107 ADAMTS12P58397 1594 aa17.54■□□□□ 0.4
USP11-204ENST00000377107 PPP4R2Q9NY27 417 aa17.54■□□□□ 0.4
USP11-204ENST00000377107 IFT140Q96RY7 1462 aa17.54■□□□□ 0.4
USP11-204ENST00000377107 CARMIL2Q6F5E8 1435 aa17.53■□□□□ 0.4
USP11-204ENST00000377107 PBRM1Q86U86 1689 aa17.52■□□□□ 0.4
USP11-204ENST00000377107 GRIN2AQ12879 1464 aa17.52■□□□□ 0.39
USP11-204ENST00000377107 DISP1Q96F81 1524 aa17.51■□□□□ 0.39
USP11-204ENST00000377107 TROQ12816 1431 aaPredicted RBP17.51■□□□□ 0.39
USP11-204ENST00000377107 KDM5BQ9UGL1 1544 aa17.51■□□□□ 0.39
USP11-204ENST00000377107 RPRD2Q5VT52 1461 aaKnown RBP17.5■□□□□ 0.39
USP11-204ENST00000377107 ARHGEF11O15085 1522 aa17.5■□□□□ 0.39
USP11-204ENST00000377107 CCDC136Q96JN2 1154 aa17.5■□□□□ 0.39
USP11-204ENST00000377107 NCOA1Q15788 1441 aa17.5■□□□□ 0.39
USP11-204ENST00000377107 ANKRD50Q9ULJ7 1429 aa17.5■□□□□ 0.39
USP11-204ENST00000377107 CAMSAP2Q08AD1 1489 aa17.49■□□□□ 0.39
USP11-204ENST00000377107 ROCK1Q13464 1354 aa17.48■□□□□ 0.39
USP11-204ENST00000377107 AKNAQ7Z591 1439 aa17.48■□□□□ 0.39
USP11-204ENST00000377107 CC2D1BQ5T0F9 858 aaKnown RBP17.47■□□□□ 0.39
USP11-204ENST00000377107 ZBED9Q6R2W3 1325 aa17.47■□□□□ 0.39
USP11-204ENST00000377107 GPATCH8Q9UKJ3 1502 aaKnown RBP17.44■□□□□ 0.38
USP11-204ENST00000377107 KIAA0556O60303 1618 aa17.44■□□□□ 0.38
USP11-204ENST00000377107 KIAA1107Q9UPP5 1409 aa17.44■□□□□ 0.38
USP11-204ENST00000377107 ROCK2O75116 1388 aaKnown RBP17.43■□□□□ 0.38
USP11-204ENST00000377107 KIF15Q9NS87 1388 aa17.42■□□□□ 0.38
USP11-204ENST00000377107 NBPF1Q3BBV0 1214 aa17.42■□□□□ 0.38
USP11-204ENST00000377107 RAPGEF6Q8TEU7 1601 aa17.42■□□□□ 0.38
USP11-204ENST00000377107 MSH5O43196 834 aa17.41■□□□□ 0.38
USP11-204ENST00000377107 GCC2Q8IWJ2 1684 aa17.4■□□□□ 0.38
USP11-204ENST00000377107 PZPP20742 1482 aa17.4■□□□□ 0.38
USP11-204ENST00000377107 TEX14Q8IWB6 1497 aa17.4■□□□□ 0.38
USP11-204ENST00000377107 PTPRGP23470 1445 aa17.4■□□□□ 0.38
USP11-204ENST00000377107 C9orf84Q5VXU9 1444 aa17.39■□□□□ 0.37
USP11-204ENST00000377107 NPM2Q86SE8 214 aaKnown RBP17.39■□□□□ 0.37
USP11-204ENST00000377107 NUDCQ9Y266 331 aa17.38■□□□□ 0.37
USP11-204ENST00000377107 KIF14Q15058 1648 aa17.37■□□□□ 0.37
USP11-204ENST00000377107 EIF4G3O43432 1585 aaKnown RBP17.37■□□□□ 0.37
USP11-204ENST00000377107 SENP3Q9H4L4 574 aaPredicted RBP17.36■□□□□ 0.37
USP11-204ENST00000377107 DNMT1P26358 1616 aaKnown RBP17.36■□□□□ 0.37
USP11-204ENST00000377107 NBR1Q14596 966 aa17.35■□□□□ 0.37
USP11-204ENST00000377107 SYNJ2O15056 1496 aa17.35■□□□□ 0.37
USP11-204ENST00000377107 PNISRQ8TF01 805 aaKnown RBP17.34■□□□□ 0.37
USP11-204ENST00000377107 SPATA31E1Q6ZUB1 1445 aa17.32■□□□□ 0.36
USP11-204ENST00000377107 ATP10BO94823 1461 aa17.32■□□□□ 0.36
USP11-204ENST00000377107 MAGI1Q96QZ7 1491 aaPredicted RBP17.31■□□□□ 0.36
USP11-204ENST00000377107 CEP170Q5SW79 1584 aa17.3■□□□□ 0.36
USP11-204ENST00000377107 DHX29Q7Z478 1369 aaKnown RBP17.29■□□□□ 0.36
USP11-204ENST00000377107 CCDC144AA2RUR9 1427 aa17.29■□□□□ 0.36
USP11-204ENST00000377107 PLIN1O60240 522 aa17.28■□□□□ 0.36
USP11-204ENST00000377107 PANK3Q9H999 370 aa17.28■□□□□ 0.36
USP11-204ENST00000377107 CDCA7LQ96GN5 454 aa17.28■□□□□ 0.36
USP11-204ENST00000377107 CHGAP10645 457 aaKnown RBP17.27■□□□□ 0.36
USP11-204ENST00000377107 ERICH6BQ5W0A0 696 aa17.27■□□□□ 0.36
USP11-204ENST00000377107 MYBBP1AQ9BQG0 1328 aaKnown RBP17.27■□□□□ 0.36
USP11-204ENST00000377107 EXOC6Q8TAG9 804 aa17.26■□□□□ 0.35
USP11-204ENST00000377107 KTN1Q86UP2 1357 aaKnown RBP17.24■□□□□ 0.35
USP11-204ENST00000377107 RALBP1Q15311 655 aa17.24■□□□□ 0.35
USP11-204ENST00000377107 RCAN3Q9UKA8 241 aa17.24■□□□□ 0.35
USP11-204ENST00000377107 NLRP13Q86W25 1043 aa17.23■□□□□ 0.35
USP11-204ENST00000377107 ANP32AP39687 249 aaKnown RBP17.22■□□□□ 0.35
USP11-204ENST00000377107 AFAP1Q8N556 730 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms