RNA–Protein interactions for RNA: ENST00000377050.4

UBD-203, Transcript of ubiquitin D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBD, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBD-203ENST00000377050 YEATS2Q9ULM3 1422 aa16.81■□□□□ 0.28
UBD-203ENST00000377050 ARID3CA6NKF2 412 aa16.81■□□□□ 0.28
UBD-203ENST00000377050 UBTFP17480 764 aaKnown RBP16.81■□□□□ 0.28
UBD-203ENST00000377050 TTC37Q6PGP7 1564 aa16.81■□□□□ 0.28
UBD-203ENST00000377050 DENND4BO75064 1496 aaPredicted RBP16.8■□□□□ 0.28
UBD-203ENST00000377050 ATP10BO94823 1461 aa16.8■□□□□ 0.28
UBD-203ENST00000377050 RICTORQ6R327 1708 aa16.8■□□□□ 0.28
UBD-203ENST00000377050 VPS8Q8N3P4 1428 aa16.79■□□□□ 0.28
UBD-203ENST00000377050 EFCAB5A4FU69 1503 aa16.78■□□□□ 0.28
UBD-203ENST00000377050 CFAP74Q9C0B2 1584 aa16.77■□□□□ 0.28
UBD-203ENST00000377050 CCER1Q8TC90 406 aaPredicted RBP16.77■□□□□ 0.28
UBD-203ENST00000377050 CLIP1P30622 1438 aa16.77■□□□□ 0.27
UBD-203ENST00000377050 ZFYVE16Q7Z3T8 1539 aa16.76■□□□□ 0.27
UBD-203ENST00000377050 STRCQ7RTU9 1775 aa16.75■□□□□ 0.27
UBD-203ENST00000377050 MLECQ14165 292 aa16.75■□□□□ 0.27
UBD-203ENST00000377050 FHOD3Q2V2M9 1422 aa16.75■□□□□ 0.27
UBD-203ENST00000377050 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.74■□□□□ 0.27
UBD-203ENST00000377050 HNRNPUL2Q1KMD3 747 aaKnown RBP16.74■□□□□ 0.27
UBD-203ENST00000377050 ZMYM4Q5VZL5 1548 aa16.74■□□□□ 0.27
UBD-203ENST00000377050 IQSEC2Q5JU85 1478 aa16.73■□□□□ 0.27
UBD-203ENST00000377050 MAGI2Q86UL8 1455 aa16.73■□□□□ 0.27
UBD-203ENST00000377050 PRXQ9BXM0 1461 aa16.73■□□□□ 0.27
UBD-203ENST00000377050 UHRF1BP1Q6BDS2 1440 aa16.7■□□□□ 0.26
UBD-203ENST00000377050 SIGLEC1Q9BZZ2 1709 aa16.7■□□□□ 0.26
UBD-203ENST00000377050 PTPRTO14522 1441 aa16.7■□□□□ 0.26
UBD-203ENST00000377050 RAPGEF6Q8TEU7 1601 aa16.68■□□□□ 0.26
UBD-203ENST00000377050 ARHGEF12Q9NZN5 1544 aa16.67■□□□□ 0.26
UBD-203ENST00000377050 SETD1BQ9UPS6 1966 aaKnown RBP16.67■□□□□ 0.26
UBD-203ENST00000377050 HECW1Q76N89 1606 aa16.64■□□□□ 0.25
UBD-203ENST00000377050 P3H3Q8IVL6 736 aa16.64■□□□□ 0.25
UBD-203ENST00000377050 LTBP4Q8N2S1 1624 aa16.63■□□□□ 0.25
UBD-203ENST00000377050 CEBPAP49715 358 aaPredicted RBP16.62■□□□□ 0.25
UBD-203ENST00000377050 C9orf84Q5VXU9 1444 aa16.62■□□□□ 0.25
UBD-203ENST00000377050 PLEKHD1A6NEE1 506 aa16.61■□□□□ 0.25
UBD-203ENST00000377050 ATP10AO60312 1499 aa16.61■□□□□ 0.25
UBD-203ENST00000377050 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.57■□□□□ 0.24
UBD-203ENST00000377050 SAMD9Q5K651 1589 aa16.56■□□□□ 0.24
UBD-203ENST00000377050 NUP153P49790 1475 aaKnown RBP16.56■□□□□ 0.24
UBD-203ENST00000377050 UBAP1LF5GYI3 381 aa16.56■□□□□ 0.24
UBD-203ENST00000377050 SCAPERQ9BY12 1400 aa16.55■□□□□ 0.24
UBD-203ENST00000377050 APLP2Q06481 763 aa16.55■□□□□ 0.24
UBD-203ENST00000377050 CLSPNQ9HAW4 1339 aa16.54■□□□□ 0.24
UBD-203ENST00000377050 ESF1Q9H501 851 aaKnown RBP16.52■□□□□ 0.24
UBD-203ENST00000377050 NCOA1Q15788 1441 aa16.52■□□□□ 0.23
UBD-203ENST00000377050 C3P01024 1663 aa16.51■□□□□ 0.23
UBD-203ENST00000377050 MED1Q15648 1581 aaPredicted RBP16.5■□□□□ 0.23
UBD-203ENST00000377050 DIEXFQ68CQ4 756 aaKnown RBP16.49■□□□□ 0.23
UBD-203ENST00000377050 TRAPPC8Q9Y2L5 1435 aa16.48■□□□□ 0.23
UBD-203ENST00000377050 CACNB1Q02641 598 aaPredicted RBP16.48■□□□□ 0.23
UBD-203ENST00000377050 MAP3K1Q13233 1512 aa16.48■□□□□ 0.23
UBD-203ENST00000377050 ZNF316A6NFI3 1004 aaPredicted RBP16.47■□□□□ 0.23
UBD-203ENST00000377050 PLCH2O75038 1416 aa16.46■□□□□ 0.23
UBD-203ENST00000377050 PELP1Q8IZL8 1130 aaKnown RBP16.46■□□□□ 0.23
UBD-203ENST00000377050 MYT1LQ9UL68 1186 aa16.46■□□□□ 0.23
UBD-203ENST00000377050 ZNF518AQ6AHZ1 1483 aa16.45■□□□□ 0.22
UBD-203ENST00000377050 CAMSAP1Q5T5Y3 1602 aa16.45■□□□□ 0.22
UBD-203ENST00000377050 RRBP1Q9P2E9 1410 aaKnown RBP16.45■□□□□ 0.22
UBD-203ENST00000377050 EFCAB2Q5VUJ9 269 aa16.44■□□□□ 0.22
UBD-203ENST00000377050 REREQ9P2R6 1566 aa16.43■□□□□ 0.22
UBD-203ENST00000377050 MYO5CQ9NQX4 1742 aa16.43■□□□□ 0.22
UBD-203ENST00000377050 ZNF335Q9H4Z2 1342 aaPredicted RBP16.43■□□□□ 0.22
UBD-203ENST00000377050 CNTLNQ9NXG0 1405 aa16.41■□□□□ 0.22
UBD-203ENST00000377050 ACIN1Q9UKV3 1341 aaKnown RBP16.41■□□□□ 0.22
UBD-203ENST00000377050 DIP2CQ9Y2E4 1556 aa16.4■□□□□ 0.22
UBD-203ENST00000377050 AGLP35573 1532 aa16.4■□□□□ 0.22
UBD-203ENST00000377050 KDM5CP41229 1560 aa16.39■□□□□ 0.21
UBD-203ENST00000377050 CENPBP07199 599 aaPredicted RBP16.39■□□□□ 0.21
UBD-203ENST00000377050 HSPA1LP34931 641 aa16.39■□□□□ 0.21
UBD-203ENST00000377050 ARHGAP35Q9NRY4 1499 aa16.39■□□□□ 0.21
UBD-203ENST00000377050 SUPT6HQ7KZ85 1726 aaKnown RBP16.37■□□□□ 0.21
UBD-203ENST00000377050 PKD2Q13563 968 aa16.37■□□□□ 0.21
UBD-203ENST00000377050 NCKAP5LQ9HCH0 1330 aa16.37■□□□□ 0.21
UBD-203ENST00000377050 NPATQ14207 1427 aa16.36■□□□□ 0.21
UBD-203ENST00000377050 DCAF8L1A6NGE4 600 aa16.36■□□□□ 0.21
UBD-203ENST00000377050 TOM1O60784 492 aa16.36■□□□□ 0.21
UBD-203ENST00000377050 RANGAP1P46060 587 aaPredicted RBP16.35■□□□□ 0.21
UBD-203ENST00000377050 PIP4K2BP78356 416 aa16.35■□□□□ 0.21
UBD-203ENST00000377050 ABCA6Q8N139 1617 aa16.34■□□□□ 0.21
UBD-203ENST00000377050 MROH2AA6NES4 1674 aa16.34■□□□□ 0.21
UBD-203ENST00000377050 AFAP1Q8N556 730 aa16.34■□□□□ 0.21
UBD-203ENST00000377050 PLA2R1Q13018 1463 aa16.34■□□□□ 0.21
UBD-203ENST00000377050 ARHGAP5Q13017 1502 aa16.34■□□□□ 0.21
UBD-203ENST00000377050 CDK13Q14004 1512 aaKnown RBP16.33■□□□□ 0.2
UBD-203ENST00000377050 MLH3Q9UHC1 1453 aa16.32■□□□□ 0.2
UBD-203ENST00000377050 ZNF142P52746 1687 aaPredicted RBP16.31■□□□□ 0.2
UBD-203ENST00000377050 DHX57Q6P158 1386 aaKnown RBP16.3■□□□□ 0.2
UBD-203ENST00000377050 CDK11AQ9UQ88 783 aaPredicted RBP16.3■□□□□ 0.2
UBD-203ENST00000377050 KIF14Q15058 1648 aa16.3■□□□□ 0.2
UBD-203ENST00000377050 TCOF1Q13428 1488 aaKnown RBP16.29■□□□□ 0.2
UBD-203ENST00000377050 MYO3AQ8NEV4 1616 aa16.28■□□□□ 0.2
UBD-203ENST00000377050 PPP4R3CPQ6ZMV5 832 aa16.28■□□□□ 0.2
UBD-203ENST00000377050 TIAM1Q13009 1591 aa16.28■□□□□ 0.2
UBD-203ENST00000377050 CPS1P31327 1500 aa16.28■□□□□ 0.2
UBD-203ENST00000377050 CCNB3Q8WWL7 1395 aa16.26■□□□□ 0.19
UBD-203ENST00000377050 CEP170BQ9Y4F5 1589 aaPredicted RBP16.26■□□□□ 0.19
UBD-203ENST00000377050 ZMYM3Q14202 1370 aa16.26■□□□□ 0.19
UBD-203ENST00000377050 KANK4Q5T7N3 995 aaPredicted RBP16.24■□□□□ 0.19
UBD-203ENST00000377050 PTPRKQ15262 1439 aa16.24■□□□□ 0.19
UBD-203ENST00000377050 NEUROD1Q13562 356 aa16.23■□□□□ 0.19
UBD-203ENST00000377050 ATP1B4Q9UN42 357 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms