RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 KDM6BO15054 1643 aa18.51■□□□□ 0.55
CLCN6-206ENST00000376496 SIN3AQ96ST3 1273 aa18.5■□□□□ 0.55
CLCN6-206ENST00000376496 ZCCHC11Q5TAX3 1644 aaKnown RBP18.5■□□□□ 0.55
CLCN6-206ENST00000376496 DNMT1P26358 1616 aaKnown RBP18.49■□□□□ 0.55
CLCN6-206ENST00000376496 NEUROD1Q13562 356 aa18.48■□□□□ 0.55
CLCN6-206ENST00000376496 CLSPNQ9HAW4 1339 aa18.48■□□□□ 0.55
CLCN6-206ENST00000376496 HNRNPMP52272 730 aaKnown RBP eCLIP18.47■□□□□ 0.55
CLCN6-206ENST00000376496 TTC37Q6PGP7 1564 aa18.47■□□□□ 0.55
CLCN6-206ENST00000376496 TRIM52Q96A61 297 aa18.46■□□□□ 0.55
CLCN6-206ENST00000376496 UHRF1BP1LA0JNW5 1464 aa18.45■□□□□ 0.54
CLCN6-206ENST00000376496 KDM5BQ9UGL1 1544 aa18.45■□□□□ 0.54
CLCN6-206ENST00000376496 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.44■□□□□ 0.54
CLCN6-206ENST00000376496 CDC42BPBQ9Y5S2 1711 aa18.43■□□□□ 0.54
CLCN6-206ENST00000376496 GCC2Q8IWJ2 1684 aa18.42■□□□□ 0.54
CLCN6-206ENST00000376496 AKNAQ7Z591 1439 aa18.41■□□□□ 0.54
CLCN6-206ENST00000376496 ARHGAP5Q13017 1502 aa18.39■□□□□ 0.53
CLCN6-206ENST00000376496 PREX2Q70Z35 1606 aa18.39■□□□□ 0.53
CLCN6-206ENST00000376496 SAMD9LQ8IVG5 1584 aa18.38■□□□□ 0.53
CLCN6-206ENST00000376496 FOXD1Q16676 465 aa18.37■□□□□ 0.53
CLCN6-206ENST00000376496 ROCK1Q13464 1354 aa18.37■□□□□ 0.53
CLCN6-206ENST00000376496 NCOA1Q15788 1441 aa18.36■□□□□ 0.53
CLCN6-206ENST00000376496 CROCC2H7BZ55 1655 aa18.35■□□□□ 0.53
CLCN6-206ENST00000376496 MBD5Q9P267 1494 aa18.33■□□□□ 0.53
CLCN6-206ENST00000376496 C9orf84Q5VXU9 1444 aa18.33■□□□□ 0.53
CLCN6-206ENST00000376496 MYO5CQ9NQX4 1742 aa18.33■□□□□ 0.53
CLCN6-206ENST00000376496 SYCP2Q9BX26 1530 aa18.33■□□□□ 0.53
CLCN6-206ENST00000376496 TSPY4P0CV99 314 aa18.33■□□□□ 0.52
CLCN6-206ENST00000376496 TSPY10P0CW01 314 aa18.33■□□□□ 0.52
CLCN6-206ENST00000376496 DENND4BO75064 1496 aaPredicted RBP18.33■□□□□ 0.52
CLCN6-206ENST00000376496 ZNF316A6NFI3 1004 aaPredicted RBP18.33■□□□□ 0.52
CLCN6-206ENST00000376496 MPHOSPH9Q99550 1183 aa18.32■□□□□ 0.52
CLCN6-206ENST00000376496 ADGBQ8N7X0 1667 aa18.31■□□□□ 0.52
CLCN6-206ENST00000376496 WDR7Q9Y4E6 1490 aa18.31■□□□□ 0.52
CLCN6-206ENST00000376496 ANKRD30AQ9BXX3 1397 aa18.31■□□□□ 0.52
CLCN6-206ENST00000376496 ASXL2Q76L83 1435 aa18.3■□□□□ 0.52
CLCN6-206ENST00000376496 PLCH2O75038 1416 aa18.29■□□□□ 0.52
CLCN6-206ENST00000376496 NPM1P06748 294 aaKnown RBP eCLIP18.29■□□□□ 0.52
CLCN6-206ENST00000376496 CYB5RLQ6IPT4 315 aa18.29■□□□□ 0.52
CLCN6-206ENST00000376496 ADGRL2O95490 1459 aa18.28■□□□□ 0.52
CLCN6-206ENST00000376496 ARHGEF12Q9NZN5 1544 aa18.28■□□□□ 0.52
CLCN6-206ENST00000376496 CCDC141Q6ZP82 1450 aa18.27■□□□□ 0.52
CLCN6-206ENST00000376496 EFCAB2Q5VUJ9 269 aa18.26■□□□□ 0.51
CLCN6-206ENST00000376496 ARHGEF5Q12774 1597 aa18.26■□□□□ 0.51
CLCN6-206ENST00000376496 SLC4A1APQ9BWU0 796 aaKnown RBP18.26■□□□□ 0.51
CLCN6-206ENST00000376496 ANKRD50Q9ULJ7 1429 aa18.25■□□□□ 0.51
CLCN6-206ENST00000376496 KIF15Q9NS87 1388 aa18.25■□□□□ 0.51
CLCN6-206ENST00000376496 SHANK2Q9UPX8 1470 aa18.24■□□□□ 0.51
CLCN6-206ENST00000376496 DIEXFQ68CQ4 756 aaKnown RBP18.23■□□□□ 0.51
CLCN6-206ENST00000376496 TRAPPC8Q9Y2L5 1435 aa18.21■□□□□ 0.51
CLCN6-206ENST00000376496 AFAP1Q8N556 730 aa18.21■□□□□ 0.51
CLCN6-206ENST00000376496 TONSLQ96HA7 1378 aa18.21■□□□□ 0.5
CLCN6-206ENST00000376496 PZPP20742 1482 aa18.2■□□□□ 0.5
CLCN6-206ENST00000376496 RSPH4AQ5TD94 716 aa18.18■□□□□ 0.5
CLCN6-206ENST00000376496 KIAA1107Q9UPP5 1409 aa18.18■□□□□ 0.5
CLCN6-206ENST00000376496 ABCC1P33527 1531 aa18.18■□□□□ 0.5
CLCN6-206ENST00000376496 NUP155O75694 1391 aa18.17■□□□□ 0.5
CLCN6-206ENST00000376496 PPP1R15AO75807 674 aaPredicted RBP18.17■□□□□ 0.5
CLCN6-206ENST00000376496 RIMBP3CA6NJZ7 1639 aa18.17■□□□□ 0.5
CLCN6-206ENST00000376496 RIMBP3BA6NNM3 1639 aa18.17■□□□□ 0.5
CLCN6-206ENST00000376496 ABCA9Q8IUA7 1624 aa18.17■□□□□ 0.5
CLCN6-206ENST00000376496 RIMBP3Q9UFD9 1639 aa18.17■□□□□ 0.5
CLCN6-206ENST00000376496 FANCAO15360 1455 aa18.17■□□□□ 0.5
CLCN6-206ENST00000376496 PLEKHH2Q8IVE3 1493 aa18.17■□□□□ 0.5
CLCN6-206ENST00000376496 PKD2Q13563 968 aa18.16■□□□□ 0.5
CLCN6-206ENST00000376496 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.15■□□□□ 0.56e-7■□□□□ 10.9
CLCN6-206ENST00000376496 HIRIP3Q9BW71 556 aaPredicted RBP18.14■□□□□ 0.49
CLCN6-206ENST00000376496 ANKRD30BQ9BXX2 1392 aa18.13■□□□□ 0.49
CLCN6-206ENST00000376496 MYT1LQ9UL68 1186 aa18.12■□□□□ 0.49
CLCN6-206ENST00000376496 SPAG9O60271 1321 aaKnown RBP18.11■□□□□ 0.49
CLCN6-206ENST00000376496 TIMELESSQ9UNS1 1208 aa18.11■□□□□ 0.49
CLCN6-206ENST00000376496 MAST1Q9Y2H9 1570 aa18.11■□□□□ 0.49
CLCN6-206ENST00000376496 SCAPERQ9BY12 1400 aa18.1■□□□□ 0.49
CLCN6-206ENST00000376496 ADGRL1O94910 1474 aa18.1■□□□□ 0.49
CLCN6-206ENST00000376496 CD109Q6YHK3 1445 aa18.09■□□□□ 0.49
CLCN6-206ENST00000376496 ARAP3Q8WWN8 1544 aa18.09■□□□□ 0.49
CLCN6-206ENST00000376496 L3MBTL2Q969R5 705 aa18.09■□□□□ 0.49
CLCN6-206ENST00000376496 PLXNC1O60486 1568 aa18.06■□□□□ 0.48
CLCN6-206ENST00000376496 ACIN1Q9UKV3 1341 aaKnown RBP18.04■□□□□ 0.48
CLCN6-206ENST00000376496 RPRD2Q5VT52 1461 aaKnown RBP18.03■□□□□ 0.48
CLCN6-206ENST00000376496 ZFYVE16Q7Z3T8 1539 aa18.03■□□□□ 0.48
CLCN6-206ENST00000376496 DUOX2Q9NRD8 1548 aa18.02■□□□□ 0.48
CLCN6-206ENST00000376496 FAM135AQ9P2D6 1515 aa18.02■□□□□ 0.47
CLCN6-206ENST00000376496 KDM5DQ9BY66 1539 aa18■□□□□ 0.47
CLCN6-206ENST00000376496 ATP7AQ04656 1500 aa17.99■□□□□ 0.47
CLCN6-206ENST00000376496 MIER1Q8N108 512 aa17.99■□□□□ 0.47
CLCN6-206ENST00000376496 RAPGEF3O95398 923 aa17.99■□□□□ 0.47
CLCN6-206ENST00000376496 NBPF8Q3BBV2 869 aa17.98■□□□□ 0.47
CLCN6-206ENST00000376496 TEX14Q8IWB6 1497 aa17.98■□□□□ 0.47
CLCN6-206ENST00000376496 FAM69CQ0P6D2 419 aa17.97■□□□□ 0.47
CLCN6-206ENST00000376496 ZNF326Q5BKZ1 582 aaKnown RBP17.97■□□□□ 0.47
CLCN6-206ENST00000376496 UNC13BO14795 1591 aa17.97■□□□□ 0.47
CLCN6-206ENST00000376496 ERBINQ96RT1 1412 aa17.97■□□□□ 0.47
CLCN6-206ENST00000376496 INO80Q9ULG1 1556 aaPredicted RBP17.96■□□□□ 0.47
CLCN6-206ENST00000376496 RTEL1-TNFRSF6BF6WH68 1400 aa17.96■□□□□ 0.47
CLCN6-206ENST00000376496 KIF3BO15066 747 aa17.95■□□□□ 0.46
CLCN6-206ENST00000376496 KIDINS220Q9ULH0 1771 aa17.93■□□□□ 0.46
CLCN6-206ENST00000376496 ZNF518AQ6AHZ1 1483 aa17.92■□□□□ 0.46
CLCN6-206ENST00000376496 POGZQ7Z3K3 1410 aa17.92■□□□□ 0.46
CLCN6-206ENST00000376496 KDM2AQ9Y2K7 1162 aa17.91■□□□□ 0.46
CLCN6-206ENST00000376496 IQGAP3Q86VI3 1631 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms