RNA–Protein interactions for RNA: ENST00000375784.7

CLIC1-208, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-208ENST00000375784 MAGI2Q86UL8 1455 aa26.84■■□□□ 1.89
CLIC1-208ENST00000375784 CERKQ8TCT0 537 aa26.83■■□□□ 1.89
CLIC1-208ENST00000375784 SIGLEC1Q9BZZ2 1709 aa26.82■■□□□ 1.88
CLIC1-208ENST00000375784 TTC37Q6PGP7 1564 aa26.81■■□□□ 1.88
CLIC1-208ENST00000375784 MLECQ14165 292 aa26.81■■□□□ 1.88
CLIC1-208ENST00000375784 ATP1B4Q9UN42 357 aaPredicted RBP26.81■■□□□ 1.88
CLIC1-208ENST00000375784 HECW1Q76N89 1606 aa26.77■■□□□ 1.88
CLIC1-208ENST00000375784 SCAPERQ9BY12 1400 aa26.76■■□□□ 1.87
CLIC1-208ENST00000375784 CLIP1P30622 1438 aa26.75■■□□□ 1.87
CLIC1-208ENST00000375784 PLCH2O75038 1416 aa26.73■■□□□ 1.87
CLIC1-208ENST00000375784 FER1L4A9Z1Z3 1794 aa26.71■■□□□ 1.87
CLIC1-208ENST00000375784 CDK13Q14004 1512 aaKnown RBP26.7■■□□□ 1.87
CLIC1-208ENST00000375784 ATP10AO60312 1499 aa26.7■■□□□ 1.87
CLIC1-208ENST00000375784 ARHGEF12Q9NZN5 1544 aa26.69■■□□□ 1.86
CLIC1-208ENST00000375784 CDK11AQ9UQ88 783 aaPredicted RBP26.68■■□□□ 1.86
CLIC1-208ENST00000375784 C9orf84Q5VXU9 1444 aa26.66■■□□□ 1.86
CLIC1-208ENST00000375784 LOC105371045A0A1W2PR82 267 aa26.65■■□□□ 1.86
CLIC1-208ENST00000375784 EFCAB2Q5VUJ9 269 aa26.65■■□□□ 1.86
CLIC1-208ENST00000375784 CEBPAP49715 358 aaPredicted RBP26.64■■□□□ 1.86
CLIC1-208ENST00000375784 CASKIN1Q8WXD9 1431 aa26.61■■□□□ 1.85
CLIC1-208ENST00000375784 PREX1Q8TCU6 1659 aa26.6■■□□□ 1.85
CLIC1-208ENST00000375784 DMRT2Q9Y5R5 561 aa26.6■■□□□ 1.85
CLIC1-208ENST00000375784 CEP162Q5TB80 1403 aa26.58■■□□□ 1.85
CLIC1-208ENST00000375784 ZNF518AQ6AHZ1 1483 aa26.55■■□□□ 1.84
CLIC1-208ENST00000375784 AFAP1Q8N556 730 aa26.54■■□□□ 1.84
CLIC1-208ENST00000375784 DISP3Q9P2K9 1392 aa26.53■■□□□ 1.84
CLIC1-208ENST00000375784 UHRF1BP1Q6BDS2 1440 aa26.53■■□□□ 1.84
CLIC1-208ENST00000375784 MYO5CQ9NQX4 1742 aa26.53■■□□□ 1.84
CLIC1-208ENST00000375784 FYCO1Q9BQS8 1478 aa26.52■■□□□ 1.84
CLIC1-208ENST00000375784 STRCQ7RTU9 1775 aa26.51■■□□□ 1.83
CLIC1-208ENST00000375784 CCDC18Q5T9S5 1454 aa26.51■■□□□ 1.83
CLIC1-208ENST00000375784 ILDR2Q71H61 639 aa26.51■■□□□ 1.83
CLIC1-208ENST00000375784 KDM5CP41229 1560 aa26.5■■□□□ 1.83
CLIC1-208ENST00000375784 KIF14Q15058 1648 aa26.48■■□□□ 1.83
CLIC1-208ENST00000375784 MYT1LQ9UL68 1186 aa26.48■■□□□ 1.83
CLIC1-208ENST00000375784 TROQ12816 1431 aaPredicted RBP26.48■■□□□ 1.83
CLIC1-208ENST00000375784 ARHGAP5Q13017 1502 aa26.47■■□□□ 1.83
CLIC1-208ENST00000375784 SOCS7O14512 581 aa26.44■■□□□ 1.82
CLIC1-208ENST00000375784 PTPRTO14522 1441 aa26.44■■□□□ 1.82
CLIC1-208ENST00000375784 DIP2CQ9Y2E4 1556 aa26.44■■□□□ 1.82
CLIC1-208ENST00000375784 REREQ9P2R6 1566 aa26.43■■□□□ 1.82
CLIC1-208ENST00000375784 SETD1BQ9UPS6 1966 aaKnown RBP26.42■■□□□ 1.82
CLIC1-208ENST00000375784 MLH3Q9UHC1 1453 aa26.41■■□□□ 1.82
CLIC1-208ENST00000375784 LRRIQ1Q96JM4 1722 aa26.39■■□□□ 1.82
CLIC1-208ENST00000375784 ESF1Q9H501 851 aaKnown RBP26.39■■□□□ 1.82
CLIC1-208ENST00000375784 AGLP35573 1532 aa26.37■■□□□ 1.81
CLIC1-208ENST00000375784 ABCA6Q8N139 1617 aa26.36■■□□□ 1.81
CLIC1-208ENST00000375784 C3P01024 1663 aa26.36■■□□□ 1.81
CLIC1-208ENST00000375784 TRAPPC8Q9Y2L5 1435 aa26.36■■□□□ 1.81
CLIC1-208ENST00000375784 LTBP4Q8N2S1 1624 aa26.32■■□□□ 1.8
CLIC1-208ENST00000375784 CDC42BPBQ9Y5S2 1711 aa26.31■■□□□ 1.8
CLIC1-208ENST00000375784 NCOA1Q15788 1441 aa26.3■■□□□ 1.8
CLIC1-208ENST00000375784 ABCC1P33527 1531 aa26.29■■□□□ 1.8
CLIC1-208ENST00000375784 MTUS2Q5JR59 1369 aa26.29■■□□□ 1.8
CLIC1-208ENST00000375784 CNTLNQ9NXG0 1405 aa26.29■■□□□ 1.8
CLIC1-208ENST00000375784 SPATA31D1Q6ZQQ2 1576 aa26.29■■□□□ 1.8
CLIC1-208ENST00000375784 VPS8Q8N3P4 1428 aa26.28■■□□□ 1.8
CLIC1-208ENST00000375784 IQSEC2Q5JU85 1478 aa26.28■■□□□ 1.8
CLIC1-208ENST00000375784 PREX2Q70Z35 1606 aa26.26■■□□□ 1.79
CLIC1-208ENST00000375784 ITSN2Q9NZM3 1697 aa26.23■■□□□ 1.79
CLIC1-208ENST00000375784 KIDINS220Q9ULH0 1771 aa26.22■■□□□ 1.79
CLIC1-208ENST00000375784 NPATQ14207 1427 aa26.21■■□□□ 1.79
CLIC1-208ENST00000375784 ZMYM3Q14202 1370 aa26.19■■□□□ 1.78
CLIC1-208ENST00000375784 CAMSAP1Q5T5Y3 1602 aa26.18■■□□□ 1.78
CLIC1-208ENST00000375784 CCNB3Q8WWL7 1395 aa26.16■■□□□ 1.78
CLIC1-208ENST00000375784 NCKAP5LQ9HCH0 1330 aa26.15■■□□□ 1.78
CLIC1-208ENST00000375784 SAMD9LQ8IVG5 1584 aa26.15■■□□□ 1.78
CLIC1-208ENST00000375784 ZNF777Q9ULD5 760 aaPredicted RBP26.14■■□□□ 1.78
CLIC1-208ENST00000375784 MROH2AA6NES4 1674 aa26.14■■□□□ 1.78
CLIC1-208ENST00000375784 EHBP1L1Q8N3D4 1523 aa26.14■■□□□ 1.77
CLIC1-208ENST00000375784 CFDP1Q9UEE9 299 aaPredicted RBP26.13■■□□□ 1.77
CLIC1-208ENST00000375784 SPAG9O60271 1321 aaKnown RBP26.13■■□□□ 1.77
CLIC1-208ENST00000375784 ZNF335Q9H4Z2 1342 aaPredicted RBP26.13■■□□□ 1.77
CLIC1-208ENST00000375784 CDC42BPAQ5VT25 1732 aa26.12■■□□□ 1.77
CLIC1-208ENST00000375784 APLP2Q06481 763 aa26.12■■□□□ 1.77
CLIC1-208ENST00000375784 GPATCH8Q9UKJ3 1502 aaKnown RBP26.12■■□□□ 1.77
CLIC1-208ENST00000375784 TIAM1Q13009 1591 aa26.09■■□□□ 1.77
CLIC1-208ENST00000375784 UBAP1LF5GYI3 381 aa26.09■■□□□ 1.77
CLIC1-208ENST00000375784 HNRNPMP52272 730 aaKnown RBP eCLIP26.09■■□□□ 1.77
CLIC1-208ENST00000375784 PKD2Q13563 968 aa26.09■■□□□ 1.77
CLIC1-208ENST00000375784 SYCP2Q9BX26 1530 aa26.08■■□□□ 1.77
CLIC1-208ENST00000375784 PLA2R1Q13018 1463 aa26.06■■□□□ 1.76
CLIC1-208ENST00000375784 MAP3K1Q13233 1512 aa26.05■■□□□ 1.76
CLIC1-208ENST00000375784 SUPT6HQ7KZ85 1726 aaKnown RBP26.04■■□□□ 1.76
CLIC1-208ENST00000375784 PTPRKQ15262 1439 aa26.04■■□□□ 1.76
CLIC1-208ENST00000375784 KIAA1107Q9UPP5 1409 aa26.03■■□□□ 1.76
CLIC1-208ENST00000375784 TCOF1Q13428 1488 aaKnown RBP26.03■■□□□ 1.76
CLIC1-208ENST00000375784 LRRC9Q6ZRR7 1453 aa26.03■■□□□ 1.76
CLIC1-208ENST00000375784 ATP7AQ04656 1500 aa26.03■■□□□ 1.76
CLIC1-208ENST00000375784 A2MP01023 1474 aa26.02■■□□□ 1.76
CLIC1-208ENST00000375784 PLXNC1O60486 1568 aa26.01■■□□□ 1.75
CLIC1-208ENST00000375784 ZNF142P52746 1687 aaPredicted RBP26.01■■□□□ 1.75
CLIC1-208ENST00000375784 CLTCQ00610 1675 aaKnown RBP26.01■■□□□ 1.75
CLIC1-208ENST00000375784 GGT6Q6P531 493 aa26.01■■□□□ 1.75
CLIC1-208ENST00000375784 MYO3AQ8NEV4 1616 aa26.01■■□□□ 1.75
CLIC1-208ENST00000375784 NCOA2Q15596 1464 aa26■■□□□ 1.75
CLIC1-208ENST00000375784 KANK4Q5T7N3 995 aaPredicted RBP26■■□□□ 1.75
CLIC1-208ENST00000375784 CEP170BQ9Y4F5 1589 aaPredicted RBP25.99■■□□□ 1.75
CLIC1-208ENST00000375784 PLEKHH2Q8IVE3 1493 aa25.99■■□□□ 1.75
CLIC1-208ENST00000375784 PPP6R1Q9UPN7 881 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms