RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 SUPT16HQ9Y5B9 1047 aaKnown RBP19.95■□□□□ 0.78
MSH5-202ENST00000375740 DNMT1P26358 1616 aaKnown RBP19.94■□□□□ 0.78
MSH5-202ENST00000375740 ABCA8O94911 1581 aa19.93■□□□□ 0.78
MSH5-202ENST00000375740 ROCK1Q13464 1354 aa19.93■□□□□ 0.78
MSH5-202ENST00000375740 CFDP1Q9UEE9 299 aaPredicted RBP19.93■□□□□ 0.78
MSH5-202ENST00000375740 KIF14Q15058 1648 aa19.92■□□□□ 0.78
MSH5-202ENST00000375740 DENND4BO75064 1496 aaPredicted RBP19.92■□□□□ 0.78
MSH5-202ENST00000375740 GPATCH8Q9UKJ3 1502 aaKnown RBP19.91■□□□□ 0.78
MSH5-202ENST00000375740 ADCY10Q96PN6 1610 aa19.91■□□□□ 0.78
MSH5-202ENST00000375740 MPHOSPH9Q99550 1183 aa19.9■□□□□ 0.78
MSH5-202ENST00000375740 BCL11AQ9H165 835 aa19.9■□□□□ 0.78
MSH5-202ENST00000375740 PLEKHD1A6NEE1 506 aa19.9■□□□□ 0.78
MSH5-202ENST00000375740 ATP10BO94823 1461 aa19.89■□□□□ 0.77
MSH5-202ENST00000375740 ITSN2Q9NZM3 1697 aa19.89■□□□□ 0.77
MSH5-202ENST00000375740 TSHZ2Q9NRE2 1034 aa19.89■□□□□ 0.77
MSH5-202ENST00000375740 CAMSAP2Q08AD1 1489 aa19.88■□□□□ 0.77
MSH5-202ENST00000375740 CHD1O14646 1710 aa19.88■□□□□ 0.77
MSH5-202ENST00000375740 ANP32EQ9BTT0 268 aa19.88■□□□□ 0.77
MSH5-202ENST00000375740 ZNF777Q9ULD5 760 aaPredicted RBP19.88■□□□□ 0.77
MSH5-202ENST00000375740 HIRIP3Q9BW71 556 aaPredicted RBP19.87■□□□□ 0.77
MSH5-202ENST00000375740 PTPRGP23470 1445 aa19.86■□□□□ 0.77
MSH5-202ENST00000375740 DDX10Q13206 875 aaKnown RBP19.84■□□□□ 0.77
MSH5-202ENST00000375740 KDM5BQ9UGL1 1544 aa19.83■□□□□ 0.76
MSH5-202ENST00000375740 FOXD1Q16676 465 aa19.82■□□□□ 0.76
MSH5-202ENST00000375740 ABCC10Q5T3U5 1492 aa19.8■□□□□ 0.76
MSH5-202ENST00000375740 CDC42BPAQ5VT25 1732 aa19.79■□□□□ 0.76
MSH5-202ENST00000375740 NCOA1Q15788 1441 aa19.79■□□□□ 0.76
MSH5-202ENST00000375740 ADGBQ8N7X0 1667 aa19.77■□□□□ 0.76
MSH5-202ENST00000375740 SLC4A1APQ9BWU0 796 aaKnown RBP19.76■□□□□ 0.75
MSH5-202ENST00000375740 CROCC2H7BZ55 1655 aa19.76■□□□□ 0.75
MSH5-202ENST00000375740 SHROOM2Q13796 1616 aa19.75■□□□□ 0.75
MSH5-202ENST00000375740 ADGRL2O95490 1459 aa19.74■□□□□ 0.75
MSH5-202ENST00000375740 ANKRD30BQ9BXX2 1392 aa19.74■□□□□ 0.75
MSH5-202ENST00000375740 ANKRD30AQ9BXX3 1397 aa19.73■□□□□ 0.75
MSH5-202ENST00000375740 L3MBTL2Q969R5 705 aa19.72■□□□□ 0.75
MSH5-202ENST00000375740 KCNH8Q96L42 1107 aa19.7■□□□□ 0.74
MSH5-202ENST00000375740 PZPP20742 1482 aa19.69■□□□□ 0.74
MSH5-202ENST00000375740 ERCC6L2Q5T890 1561 aa19.69■□□□□ 0.74
MSH5-202ENST00000375740 RPRD2Q5VT52 1461 aaKnown RBP19.68■□□□□ 0.74
MSH5-202ENST00000375740 HNRNPMP52272 730 aaKnown RBP eCLIP19.67■□□□□ 0.74
MSH5-202ENST00000375740 TSPY4P0CV99 314 aa19.66■□□□□ 0.74
MSH5-202ENST00000375740 TSPY10P0CW01 314 aa19.66■□□□□ 0.74
MSH5-202ENST00000375740 C9orf84Q5VXU9 1444 aa19.66■□□□□ 0.74
MSH5-202ENST00000375740 ANKRD50Q9ULJ7 1429 aa19.66■□□□□ 0.74
MSH5-202ENST00000375740 SHANK2Q9UPX8 1470 aa19.65■□□□□ 0.74
MSH5-202ENST00000375740 HSPA5P11021 654 aaKnown RBP19.64■□□□□ 0.73
MSH5-202ENST00000375740 CDC42BPBQ9Y5S2 1711 aa19.63■□□□□ 0.73
MSH5-202ENST00000375740 MBD5Q9P267 1494 aa19.62■□□□□ 0.73
MSH5-202ENST00000375740 ABCC2Q92887 1545 aa19.61■□□□□ 0.73
MSH5-202ENST00000375740 ARHGEF5Q12774 1597 aa19.6■□□□□ 0.73
MSH5-202ENST00000375740 ANP32CO43423 234 aa19.6■□□□□ 0.73
MSH5-202ENST00000375740 PKD2Q13563 968 aa19.6■□□□□ 0.73
MSH5-202ENST00000375740 NBPF8Q3BBV2 869 aa19.6■□□□□ 0.73
MSH5-202ENST00000375740 PREX2Q70Z35 1606 aa19.6■□□□□ 0.73
MSH5-202ENST00000375740 TEX14Q8IWB6 1497 aa19.6■□□□□ 0.73
MSH5-202ENST00000375740 SAMD9LQ8IVG5 1584 aa19.6■□□□□ 0.73
MSH5-202ENST00000375740 KIAA1107Q9UPP5 1409 aa19.6■□□□□ 0.73
MSH5-202ENST00000375740 EIF4G2P78344 907 aaKnown RBP eCLIP19.6■□□□□ 0.73
MSH5-202ENST00000375740 BCANQ96GW7 911 aa19.59■□□□□ 0.73
MSH5-202ENST00000375740 CLASP1Q7Z460 1538 aa19.58■□□□□ 0.73
MSH5-202ENST00000375740 NUP155O75694 1391 aa19.57■□□□□ 0.72
MSH5-202ENST00000375740 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.56■□□□□ 0.72
MSH5-202ENST00000375740 KIF15Q9NS87 1388 aa19.56■□□□□ 0.72
MSH5-202ENST00000375740 TTC37Q6PGP7 1564 aa19.56■□□□□ 0.72
MSH5-202ENST00000375740 RSPH4AQ5TD94 716 aa19.56■□□□□ 0.72
MSH5-202ENST00000375740 CCDC141Q6ZP82 1450 aa19.55■□□□□ 0.72
MSH5-202ENST00000375740 WASHC2AQ641Q2 1341 aa19.55■□□□□ 0.72
MSH5-202ENST00000375740 CCER2I3L3R5 266 aa19.55■□□□□ 0.72
MSH5-202ENST00000375740 ARHGAP5Q13017 1502 aa19.53■□□□□ 0.72
MSH5-202ENST00000375740 SYCP2Q9BX26 1530 aa19.5■□□□□ 0.71
MSH5-202ENST00000375740 KDM5DQ9BY66 1539 aa19.49■□□□□ 0.71
MSH5-202ENST00000375740 ZCCHC11Q5TAX3 1644 aaKnown RBP19.49■□□□□ 0.71
MSH5-202ENST00000375740 MYO5CQ9NQX4 1742 aa19.49■□□□□ 0.71
MSH5-202ENST00000375740 UHRF1BP1LA0JNW5 1464 aa19.48■□□□□ 0.71
MSH5-202ENST00000375740 C11orf95C9JLR9 678 aaPredicted RBP19.48■□□□□ 0.71
MSH5-202ENST00000375740 SPATA31E1Q6ZUB1 1445 aa19.44■□□□□ 0.7
MSH5-202ENST00000375740 MAST1Q9Y2H9 1570 aa19.44■□□□□ 0.7
MSH5-202ENST00000375740 PLEKHH2Q8IVE3 1493 aa19.43■□□□□ 0.7
MSH5-202ENST00000375740 CCDC7Q96M83 1385 aa19.43■□□□□ 0.7
MSH5-202ENST00000375740 PLCH2O75038 1416 aa19.43■□□□□ 0.7
MSH5-202ENST00000375740 ZNF326Q5BKZ1 582 aaKnown RBP19.42■□□□□ 0.7
MSH5-202ENST00000375740 FKBP8Q14318 412 aa19.42■□□□□ 0.7
MSH5-202ENST00000375740 ARHGEF12Q9NZN5 1544 aa19.41■□□□□ 0.7
MSH5-202ENST00000375740 EFCAB2Q5VUJ9 269 aa19.4■□□□□ 0.7
MSH5-202ENST00000375740 RBM19Q9Y4C8 960 aaKnown RBP19.4■□□□□ 0.7
MSH5-202ENST00000375740 FAM135AQ9P2D6 1515 aa19.4■□□□□ 0.7
MSH5-202ENST00000375740 CNTLNQ9NXG0 1405 aa19.39■□□□□ 0.69
MSH5-202ENST00000375740 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.37■□□□□ 0.694e-7■■□□□ 12.9
MSH5-202ENST00000375740 KIF7Q2M1P5 1343 aa19.36■□□□□ 0.69
MSH5-202ENST00000375740 PLXNC1O60486 1568 aa19.36■□□□□ 0.69
MSH5-202ENST00000375740 UHRF1BP1Q6BDS2 1440 aa19.35■□□□□ 0.69
MSH5-202ENST00000375740 UNC13BO14795 1591 aa19.34■□□□□ 0.69
MSH5-202ENST00000375740 KDM2AQ9Y2K7 1162 aa19.34■□□□□ 0.69
MSH5-202ENST00000375740 POLR1AO95602 1720 aaPredicted RBP19.34■□□□□ 0.69
MSH5-202ENST00000375740 USP47Q96K76 1375 aa19.33■□□□□ 0.69
MSH5-202ENST00000375740 DCAF11Q8TEB1 546 aa19.32■□□□□ 0.68
MSH5-202ENST00000375740 DUOX2Q9NRD8 1548 aa19.32■□□□□ 0.68
MSH5-202ENST00000375740 ABCC1P33527 1531 aa19.32■□□□□ 0.68
MSH5-202ENST00000375740 TRAPPC8Q9Y2L5 1435 aa19.31■□□□□ 0.68
MSH5-202ENST00000375740 MSH5O43196 834 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms