RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 IFT140Q96RY7 1462 aa20.22■□□□□ 0.83
MSH5-201ENST00000375703 ABCC5O15440 1437 aa20.21■□□□□ 0.83
MSH5-201ENST00000375703 ANKRD30BQ9BXX2 1392 aa20.2■□□□□ 0.83
MSH5-201ENST00000375703 DISP1Q96F81 1524 aa20.2■□□□□ 0.82
MSH5-201ENST00000375703 SLC4A1APQ9BWU0 796 aaKnown RBP20.18■□□□□ 0.82
MSH5-201ENST00000375703 NUP153P49790 1475 aaKnown RBP20.18■□□□□ 0.82
MSH5-201ENST00000375703 KIAA0556O60303 1618 aa20.18■□□□□ 0.82
MSH5-201ENST00000375703 C11orf95C9JLR9 678 aaPredicted RBP20.17■□□□□ 0.82
MSH5-201ENST00000375703 RPRD2Q5VT52 1461 aaKnown RBP20.16■□□□□ 0.82
MSH5-201ENST00000375703 NBPF8Q3BBV2 869 aa20.16■□□□□ 0.82
MSH5-201ENST00000375703 CNTLNQ9NXG0 1405 aa20.16■□□□□ 0.82
MSH5-201ENST00000375703 DNMT1P26358 1616 aaKnown RBP20.15■□□□□ 0.82
MSH5-201ENST00000375703 CCDC7Q96M83 1385 aa20.14■□□□□ 0.81
MSH5-201ENST00000375703 RAPGEF6Q8TEU7 1601 aa20.13■□□□□ 0.81
MSH5-201ENST00000375703 NCOA1Q15788 1441 aa20.13■□□□□ 0.81
MSH5-201ENST00000375703 GRIN2AQ12879 1464 aa20.12■□□□□ 0.81
MSH5-201ENST00000375703 CFDP1Q9UEE9 299 aaPredicted RBP20.11■□□□□ 0.81
MSH5-201ENST00000375703 PRKRIP1Q9H875 184 aaPredicted RBP20.11■□□□□ 0.81
MSH5-201ENST00000375703 CCDC184Q52MB2 194 aa20.1■□□□□ 0.81
MSH5-201ENST00000375703 PRG4Q92954 1404 aaPredicted RBP20.09■□□□□ 0.81
MSH5-201ENST00000375703 TEX14Q8IWB6 1497 aa20.08■□□□□ 0.81
MSH5-201ENST00000375703 TROQ12816 1431 aaPredicted RBP20.08■□□□□ 0.8
MSH5-201ENST00000375703 CHMP7Q8WUX9 453 aaPredicted RBP20.07■□□□□ 0.8
MSH5-201ENST00000375703 RBM19Q9Y4C8 960 aaKnown RBP20.07■□□□□ 0.8
MSH5-201ENST00000375703 ZNF777Q9ULD5 760 aaPredicted RBP20.06■□□□□ 0.8
MSH5-201ENST00000375703 FAM9BQ8IZU0 186 aa20.05■□□□□ 0.8
MSH5-201ENST00000375703 KIF7Q2M1P5 1343 aa20.04■□□□□ 0.8
MSH5-201ENST00000375703 SPATA31E1Q6ZUB1 1445 aa20.04■□□□□ 0.8
MSH5-201ENST00000375703 ANP32EQ9BTT0 268 aa20.04■□□□□ 0.8
MSH5-201ENST00000375703 MRS2Q9HD23 443 aa20.04■□□□□ 0.8
MSH5-201ENST00000375703 CAMSAP2Q08AD1 1489 aa20.04■□□□□ 0.8
MSH5-201ENST00000375703 IRX6P78412 446 aaPredicted RBP20.03■□□□□ 0.8
MSH5-201ENST00000375703 EIF4G3O43432 1585 aaKnown RBP20.03■□□□□ 0.8
MSH5-201ENST00000375703 PZPP20742 1482 aa20.02■□□□□ 0.8
MSH5-201ENST00000375703 FBLN2P98095 1184 aa20.02■□□□□ 0.8
MSH5-201ENST00000375703 GPATCH8Q9UKJ3 1502 aaKnown RBP20.02■□□□□ 0.8
MSH5-201ENST00000375703 PLB1Q6P1J6 1458 aa20.02■□□□□ 0.8
MSH5-201ENST00000375703 JPH4Q96JJ6 628 aa19.99■□□□□ 0.79
MSH5-201ENST00000375703 MAGI1Q96QZ7 1491 aaPredicted RBP19.98■□□□□ 0.79
MSH5-201ENST00000375703 PKD2Q13563 968 aa19.98■□□□□ 0.79
MSH5-201ENST00000375703 CARMIL2Q6F5E8 1435 aa19.97■□□□□ 0.79
MSH5-201ENST00000375703 KIAA1107Q9UPP5 1409 aa19.97■□□□□ 0.79
MSH5-201ENST00000375703 ANKRD30AQ9BXX3 1397 aa19.97■□□□□ 0.79
MSH5-201ENST00000375703 ERICH6BQ5W0A0 696 aa19.97■□□□□ 0.79
MSH5-201ENST00000375703 ITSN2Q9NZM3 1697 aa19.96■□□□□ 0.79
MSH5-201ENST00000375703 SYNJ2O15056 1496 aa19.96■□□□□ 0.79
MSH5-201ENST00000375703 ADGRL2O95490 1459 aa19.96■□□□□ 0.79
MSH5-201ENST00000375703 CEP170Q5SW79 1584 aa19.95■□□□□ 0.78
MSH5-201ENST00000375703 ZNF326Q5BKZ1 582 aaKnown RBP19.95■□□□□ 0.78
MSH5-201ENST00000375703 PLEKHD1A6NEE1 506 aa19.95■□□□□ 0.78
MSH5-201ENST00000375703 ZBED9Q6R2W3 1325 aa19.94■□□□□ 0.78
MSH5-201ENST00000375703 KIF14Q15058 1648 aa19.94■□□□□ 0.78
MSH5-201ENST00000375703 ERCC6Q03468 1493 aa19.94■□□□□ 0.78
MSH5-201ENST00000375703 ADGBQ8N7X0 1667 aa19.93■□□□□ 0.78
MSH5-201ENST00000375703 ANKRD50Q9ULJ7 1429 aa19.91■□□□□ 0.78
MSH5-201ENST00000375703 ADCY10Q96PN6 1610 aa19.91■□□□□ 0.78
MSH5-201ENST00000375703 POLR3GLQ9BT43 218 aa19.91■□□□□ 0.78
MSH5-201ENST00000375703 PPP4R2Q9NY27 417 aa19.91■□□□□ 0.78
MSH5-201ENST00000375703 USP47Q96K76 1375 aa19.9■□□□□ 0.78
MSH5-201ENST00000375703 MBD5Q9P267 1494 aa19.9■□□□□ 0.78
MSH5-201ENST00000375703 POLR1AO95602 1720 aaPredicted RBP19.89■□□□□ 0.77
MSH5-201ENST00000375703 NUP155O75694 1391 aa19.88■□□□□ 0.77
MSH5-201ENST00000375703 NUP160Q12769 1436 aa19.87■□□□□ 0.77
MSH5-201ENST00000375703 TSPY4P0CV99 314 aa19.87■□□□□ 0.77
MSH5-201ENST00000375703 TSPY10P0CW01 314 aa19.87■□□□□ 0.77
MSH5-201ENST00000375703 CNGB1Q14028 1251 aaPredicted RBP19.87■□□□□ 0.77
MSH5-201ENST00000375703 CROCC2H7BZ55 1655 aa19.87■□□□□ 0.77
MSH5-201ENST00000375703 DHX29Q7Z478 1369 aaKnown RBP19.86■□□□□ 0.77
MSH5-201ENST00000375703 ARID4BQ4LE39 1312 aaPredicted RBP19.86■□□□□ 0.77
MSH5-201ENST00000375703 ATP10BO94823 1461 aa19.83■□□□□ 0.77
MSH5-201ENST00000375703 C9orf84Q5VXU9 1444 aa19.83■□□□□ 0.77
MSH5-201ENST00000375703 ABCC10Q5T3U5 1492 aa19.82■□□□□ 0.76
MSH5-201ENST00000375703 CARD11Q9BXL7 1154 aa19.81■□□□□ 0.76
MSH5-201ENST00000375703 BCORL1Q5H9F3 1711 aa19.81■□□□□ 0.76
MSH5-201ENST00000375703 HNRNPMP52272 730 aaKnown RBP eCLIP19.81■□□□□ 0.76
MSH5-201ENST00000375703 UHRF1BP1Q6BDS2 1440 aa19.81■□□□□ 0.76
MSH5-201ENST00000375703 BCL11AQ9H165 835 aa19.81■□□□□ 0.76
MSH5-201ENST00000375703 ABCA8O94911 1581 aa19.8■□□□□ 0.76
MSH5-201ENST00000375703 SHANK2Q9UPX8 1470 aa19.8■□□□□ 0.76
MSH5-201ENST00000375703 KDM2AQ9Y2K7 1162 aa19.8■□□□□ 0.76
MSH5-201ENST00000375703 CDC42BPAQ5VT25 1732 aa19.79■□□□□ 0.76
MSH5-201ENST00000375703 KDM5CP41229 1560 aa19.79■□□□□ 0.76
MSH5-201ENST00000375703 ROCK2O75116 1388 aaKnown RBP19.77■□□□□ 0.76
MSH5-201ENST00000375703 B4GALNT3Q6L9W6 998 aa19.77■□□□□ 0.76
MSH5-201ENST00000375703 RALGAPBQ86X10 1494 aa19.76■□□□□ 0.75
MSH5-201ENST00000375703 KIF15Q9NS87 1388 aa19.76■□□□□ 0.75
MSH5-201ENST00000375703 FANCIQ9NVI1 1328 aa19.76■□□□□ 0.75
MSH5-201ENST00000375703 DCAF11Q8TEB1 546 aa19.75■□□□□ 0.75
MSH5-201ENST00000375703 MSH5O43196 834 aa19.74■□□□□ 0.75
MSH5-201ENST00000375703 SMG6Q86US8 1419 aaKnown RBP19.74■□□□□ 0.75
MSH5-201ENST00000375703 ST20-MTHFSA0A0A6YYL1 179 aa19.74■□□□□ 0.75
MSH5-201ENST00000375703 TMC1Q8TDI8 760 aa19.74■□□□□ 0.75
MSH5-201ENST00000375703 ARHGEF12Q9NZN5 1544 aa19.73■□□□□ 0.75
MSH5-201ENST00000375703 KDM5DQ9BY66 1539 aa19.72■□□□□ 0.75
MSH5-201ENST00000375703 PNISRQ8TF01 805 aaKnown RBP19.72■□□□□ 0.75
MSH5-201ENST00000375703 NUDCQ9Y266 331 aa19.72■□□□□ 0.75
MSH5-201ENST00000375703 PTPRGP23470 1445 aa19.71■□□□□ 0.75
MSH5-201ENST00000375703 RSPH4AQ5TD94 716 aa19.69■□□□□ 0.74
MSH5-201ENST00000375703 ARHGEF5Q12774 1597 aa19.68■□□□□ 0.74
MSH5-201ENST00000375703 CCDC141Q6ZP82 1450 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms