RNA–Protein interactions for RNA: ENST00000375549.7

SDHD-201, Transcript of succinate dehydrogenase complex subunit D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHD, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-201ENST00000375549 MIA2Q96PC5 1412 aa18.69■□□□□ 0.58
SDHD-201ENST00000375549 ZNF777Q9ULD5 760 aaPredicted RBP18.69■□□□□ 0.58
SDHD-201ENST00000375549 ITSN2Q9NZM3 1697 aa18.67■□□□□ 0.58
SDHD-201ENST00000375549 ABCA9Q8IUA7 1624 aa18.66■□□□□ 0.58
SDHD-201ENST00000375549 CDC42BPAQ5VT25 1732 aa18.66■□□□□ 0.58
SDHD-201ENST00000375549 FAM69CQ0P6D2 419 aa18.66■□□□□ 0.58
SDHD-201ENST00000375549 PLCH2O75038 1416 aa18.65■□□□□ 0.58
SDHD-201ENST00000375549 PTPN23Q9H3S7 1636 aa18.65■□□□□ 0.58
SDHD-201ENST00000375549 ZNF644Q9H582 1327 aaPredicted RBP18.65■□□□□ 0.58
SDHD-201ENST00000375549 ARHGAP5Q13017 1502 aa18.64■□□□□ 0.57
SDHD-201ENST00000375549 PREX2Q70Z35 1606 aa18.64■□□□□ 0.57
SDHD-201ENST00000375549 ITGAEP38570 1179 aa18.64■□□□□ 0.57
SDHD-201ENST00000375549 TCOF1Q13428 1488 aaKnown RBP18.63■□□□□ 0.57
SDHD-201ENST00000375549 MYO5CQ9NQX4 1742 aa18.63■□□□□ 0.57
SDHD-201ENST00000375549 CD109Q6YHK3 1445 aa18.63■□□□□ 0.57
SDHD-201ENST00000375549 DMRT2Q9Y5R5 561 aa18.63■□□□□ 0.57
SDHD-201ENST00000375549 EFCAB2Q5VUJ9 269 aa18.62■□□□□ 0.57
SDHD-201ENST00000375549 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.62■□□□□ 0.573e-6■■□□□ 12.8
SDHD-201ENST00000375549 DIP2BQ9P265 1576 aa18.61■□□□□ 0.57
SDHD-201ENST00000375549 CAMSAP2Q08AD1 1489 aa18.61■□□□□ 0.57
SDHD-201ENST00000375549 GLI2P10070 1586 aa18.61■□□□□ 0.57
SDHD-201ENST00000375549 CDC42BPBQ9Y5S2 1711 aa18.6■□□□□ 0.57
SDHD-201ENST00000375549 ARAP3Q8WWN8 1544 aa18.57■□□□□ 0.56
SDHD-201ENST00000375549 MAPK8IP2Q13387 824 aaPredicted RBP18.57■□□□□ 0.56
SDHD-201ENST00000375549 FANCAO15360 1455 aa18.56■□□□□ 0.56
SDHD-201ENST00000375549 SAMD9LQ8IVG5 1584 aa18.56■□□□□ 0.56
SDHD-201ENST00000375549 HNRNPMP52272 730 aaKnown RBP eCLIP18.55■□□□□ 0.56
SDHD-201ENST00000375549 MAP3K4Q9Y6R4 1608 aa18.55■□□□□ 0.56
SDHD-201ENST00000375549 TRHP20396 242 aaPredicted RBP18.53■□□□□ 0.56
SDHD-201ENST00000375549 PLEKHH2Q8IVE3 1493 aa18.52■□□□□ 0.56
SDHD-201ENST00000375549 DAPK1P53355 1430 aa18.5■□□□□ 0.55
SDHD-201ENST00000375549 AKNAQ7Z591 1439 aa18.5■□□□□ 0.55
SDHD-201ENST00000375549 KIAA1107Q9UPP5 1409 aa18.5■□□□□ 0.55
SDHD-201ENST00000375549 SYCP2Q9BX26 1530 aa18.5■□□□□ 0.55
SDHD-201ENST00000375549 CHIC2Q9UKJ5 165 aa18.49■□□□□ 0.55
SDHD-201ENST00000375549 ABCC5O15440 1437 aa18.49■□□□□ 0.55
SDHD-201ENST00000375549 PTPRKQ15262 1439 aa18.49■□□□□ 0.55
SDHD-201ENST00000375549 KIF13AQ9H1H9 1805 aa18.49■□□□□ 0.55
SDHD-201ENST00000375549 MBD5Q9P267 1494 aa18.48■□□□□ 0.55
SDHD-201ENST00000375549 DNMT1P26358 1616 aaKnown RBP18.48■□□□□ 0.55
SDHD-201ENST00000375549 CFAP74Q9C0B2 1584 aa18.48■□□□□ 0.55
SDHD-201ENST00000375549 ABCC1P33527 1531 aa18.48■□□□□ 0.55
SDHD-201ENST00000375549 ARHGEF12Q9NZN5 1544 aa18.48■□□□□ 0.55
SDHD-201ENST00000375549 ADGRL1O94910 1474 aa18.48■□□□□ 0.55
SDHD-201ENST00000375549 RSPH4AQ5TD94 716 aa18.48■□□□□ 0.55
SDHD-201ENST00000375549 NEO1Q92859 1461 aa18.47■□□□□ 0.55
SDHD-201ENST00000375549 SCAPERQ9BY12 1400 aa18.47■□□□□ 0.55
SDHD-201ENST00000375549 TSPY4P0CV99 314 aa18.46■□□□□ 0.55
SDHD-201ENST00000375549 TSPY10P0CW01 314 aa18.46■□□□□ 0.55
SDHD-201ENST00000375549 ARHGEF5Q12774 1597 aa18.46■□□□□ 0.54
SDHD-201ENST00000375549 CCDC141Q6ZP82 1450 aa18.45■□□□□ 0.54
SDHD-201ENST00000375549 TEX14Q8IWB6 1497 aa18.45■□□□□ 0.54
SDHD-201ENST00000375549 SCAF1Q9H7N4 1312 aaKnown RBP18.44■□□□□ 0.54
SDHD-201ENST00000375549 TSPOAP1O95153 1857 aa18.44■□□□□ 0.54
SDHD-201ENST00000375549 TRAPPC8Q9Y2L5 1435 aa18.44■□□□□ 0.54
SDHD-201ENST00000375549 AFAP1Q8N556 730 aa18.42■□□□□ 0.54
SDHD-201ENST00000375549 PPRC1Q5VV67 1664 aaKnown RBP18.42■□□□□ 0.54
SDHD-201ENST00000375549 C9orf84Q5VXU9 1444 aa18.41■□□□□ 0.54
SDHD-201ENST00000375549 RRP7BPQ9NSQ0 103 aa18.4■□□□□ 0.54
SDHD-201ENST00000375549 SHANK2Q9UPX8 1470 aa18.4■□□□□ 0.54
SDHD-201ENST00000375549 CROCC2H7BZ55 1655 aa18.39■□□□□ 0.53
SDHD-201ENST00000375549 DENND4BO75064 1496 aaPredicted RBP18.38■□□□□ 0.53
SDHD-201ENST00000375549 MYT1LQ9UL68 1186 aa18.38■□□□□ 0.53
SDHD-201ENST00000375549 SPAG9O60271 1321 aaKnown RBP18.37■□□□□ 0.53
SDHD-201ENST00000375549 RAPGEF3O95398 923 aa18.37■□□□□ 0.53
SDHD-201ENST00000375549 ROCK1Q13464 1354 aa18.37■□□□□ 0.53
SDHD-201ENST00000375549 ANKRD30AQ9BXX3 1397 aa18.37■□□□□ 0.53
SDHD-201ENST00000375549 POGZQ7Z3K3 1410 aa18.36■□□□□ 0.53
SDHD-201ENST00000375549 ZNF518AQ6AHZ1 1483 aa18.36■□□□□ 0.53
SDHD-201ENST00000375549 SETD5Q9C0A6 1442 aa18.36■□□□□ 0.53
SDHD-201ENST00000375549 ADGRL2O95490 1459 aa18.35■□□□□ 0.53
SDHD-201ENST00000375549 HFM1A2PYH4 1435 aa18.35■□□□□ 0.53
SDHD-201ENST00000375549 NAIPQ13075 1403 aa18.34■□□□□ 0.53
SDHD-201ENST00000375549 NCOA1Q15788 1441 aa18.34■□□□□ 0.53
SDHD-201ENST00000375549 MAST1Q9Y2H9 1570 aa18.34■□□□□ 0.53
SDHD-201ENST00000375549 ADGBQ8N7X0 1667 aa18.33■□□□□ 0.52
SDHD-201ENST00000375549 RAB3GAP2Q9H2M9 1393 aa18.32■□□□□ 0.52
SDHD-201ENST00000375549 KIF15Q9NS87 1388 aa18.31■□□□□ 0.52
SDHD-201ENST00000375549 RTEL1-TNFRSF6BF6WH68 1400 aa18.31■□□□□ 0.52
SDHD-201ENST00000375549 ZFYVE16Q7Z3T8 1539 aa18.29■□□□□ 0.52
SDHD-201ENST00000375549 KDM5CP41229 1560 aa18.29■□□□□ 0.52
SDHD-201ENST00000375549 ATP7AQ04656 1500 aa18.28■□□□□ 0.52
SDHD-201ENST00000375549 COL17A1Q9UMD9 1497 aaPredicted RBP18.28■□□□□ 0.52
SDHD-201ENST00000375549 INO80Q9ULG1 1556 aaPredicted RBP18.27■□□□□ 0.51
SDHD-201ENST00000375549 GCC2Q8IWJ2 1684 aa18.27■□□□□ 0.51
SDHD-201ENST00000375549 RICTORQ6R327 1708 aa18.27■□□□□ 0.51
SDHD-201ENST00000375549 CACNB1Q02641 598 aaPredicted RBP18.26■□□□□ 0.51
SDHD-201ENST00000375549 MLH3Q9UHC1 1453 aa18.26■□□□□ 0.51
SDHD-201ENST00000375549 PLXNC1O60486 1568 aa18.26■□□□□ 0.51
SDHD-201ENST00000375549 FRMPD1Q5SYB0 1578 aa18.26■□□□□ 0.51
SDHD-201ENST00000375549 HECW2Q9P2P5 1572 aa18.25■□□□□ 0.51
SDHD-201ENST00000375549 ANKRD50Q9ULJ7 1429 aa18.24■□□□□ 0.51
SDHD-201ENST00000375549 HRCP23327 699 aa18.23■□□□□ 0.51
SDHD-201ENST00000375549 KDM6BO15054 1643 aa18.23■□□□□ 0.51
SDHD-201ENST00000375549 KIDINS220Q9ULH0 1771 aa18.23■□□□□ 0.51
SDHD-201ENST00000375549 DUOX2Q9NRD8 1548 aa18.22■□□□□ 0.51
SDHD-201ENST00000375549 TRIM52Q96A61 297 aa18.21■□□□□ 0.51
SDHD-201ENST00000375549 ZMYM4Q5VZL5 1548 aa18.21■□□□□ 0.51
SDHD-201ENST00000375549 YEATS2Q9ULM3 1422 aa18.2■□□□□ 0.5
SDHD-201ENST00000375549 MAGI2Q86UL8 1455 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms