RNA–Protein interactions for RNA: ENST00000375437.6

SCN2A-203, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-203ENST00000375437 TRIM34Q9BYJ4 488 aa6.87□□□□□ -1.31
SCN2A-203ENST00000375437 MARCH6O60337 910 aa6.87□□□□□ -1.31
SCN2A-203ENST00000375437 CALD1Q05682 793 aaKnown RBP6.87□□□□□ -1.31
SCN2A-203ENST00000375437 TPM2P07951 284 aa6.86□□□□□ -1.31
SCN2A-203ENST00000375437 FOXD1Q16676 465 aa6.86□□□□□ -1.31
SCN2A-203ENST00000375437 TSR1Q2NL82 804 aaKnown RBP6.86□□□□□ -1.31
SCN2A-203ENST00000375437 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.85□□□□□ -1.31
SCN2A-203ENST00000375437 TPM3P06753 285 aa6.85□□□□□ -1.31
SCN2A-203ENST00000375437 CSRNP3Q8WYN3 585 aa6.85□□□□□ -1.31
SCN2A-203ENST00000375437 CALRP27797 417 aaKnown RBP6.85□□□□□ -1.31
SCN2A-203ENST00000375437 TNNT3P45378 269 aaPredicted RBP6.85□□□□□ -1.31
SCN2A-203ENST00000375437 AMOTL1Q8IY63 956 aa6.85□□□□□ -1.31
SCN2A-203ENST00000375437 SRPK2P78362 688 aaKnown RBP6.84□□□□□ -1.31
SCN2A-203ENST00000375437 CCDC70Q6NSX1 233 aa6.84□□□□□ -1.31
SCN2A-203ENST00000375437 CSB-PGBD3P0DP91 1061 aa6.84□□□□□ -1.31
SCN2A-203ENST00000375437 PDE4CQ08493 712 aa6.83□□□□□ -1.32
SCN2A-203ENST00000375437 CHMP4CQ96CF2 233 aa6.83□□□□□ -1.32
SCN2A-203ENST00000375437 U2SURPO15042 1029 aaKnown RBP6.83□□□□□ -1.32
SCN2A-203ENST00000375437 NOL10Q9BSC4 688 aaKnown RBP6.83□□□□□ -1.32
SCN2A-203ENST00000375437 KIF3AQ9Y496 699 aa6.83□□□□□ -1.32
SCN2A-203ENST00000375437 FRAT2O75474 233 aaPredicted RBP6.83□□□□□ -1.32
SCN2A-203ENST00000375437 SPAG9O60271 1321 aaKnown RBP6.83□□□□□ -1.32
SCN2A-203ENST00000375437 GTF2E1P29083 439 aaPredicted RBP6.82□□□□□ -1.32
SCN2A-203ENST00000375437 AEBP2Q6ZN18 517 aaPredicted RBP6.82□□□□□ -1.32
SCN2A-203ENST00000375437 RRP12Q5JTH9 1297 aaKnown RBP6.82□□□□□ -1.32
SCN2A-203ENST00000375437 IPO8O15397 1037 aaKnown RBP6.81□□□□□ -1.32
SCN2A-203ENST00000375437 CLIP1P30622 1438 aa6.81□□□□□ -1.32
SCN2A-203ENST00000375437 PPP4R2Q9NY27 417 aa6.81□□□□□ -1.32
SCN2A-203ENST00000375437 CHMP3Q9Y3E7 222 aa6.81□□□□□ -1.32
SCN2A-203ENST00000375437 ZNF330Q9Y3S2 320 aaPredicted RBP6.81□□□□□ -1.32
SCN2A-203ENST00000375437 PHF14O94880 888 aa6.81□□□□□ -1.32
SCN2A-203ENST00000375437 HSP90B1P14625 803 aaKnown RBP6.81□□□□□ -1.32
SCN2A-203ENST00000375437 TPD52L1Q16890 204 aaPredicted RBP6.81□□□□□ -1.32
SCN2A-203ENST00000375437 PAK3O75914 559 aaPredicted RBP6.81□□□□□ -1.32
SCN2A-203ENST00000375437 WWC2Q6AWC2 1192 aa6.81□□□□□ -1.32
SCN2A-203ENST00000375437 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.81□□□□□ -1.32
SCN2A-203ENST00000375437 TPM1P09493 284 aa6.81□□□□□ -1.32
SCN2A-203ENST00000375437 RGL3Q3MIN7 710 aa6.8□□□□□ -1.32
SCN2A-203ENST00000375437 FRAT1Q92837 279 aaPredicted RBP6.8□□□□□ -1.32
SCN2A-203ENST00000375437 LRRFIP1Q32MZ4 808 aaKnown RBP6.8□□□□□ -1.32
SCN2A-203ENST00000375437 GBP4Q96PP9 640 aa6.8□□□□□ -1.32
SCN2A-203ENST00000375437 NEUROD2Q15784 382 aa6.79□□□□□ -1.32
SCN2A-203ENST00000375437 MEX3CQ5U5Q3 659 aaKnown RBP6.79□□□□□ -1.32
SCN2A-203ENST00000375437 WASHC2AQ641Q2 1341 aa6.79□□□□□ -1.32
SCN2A-203ENST00000375437 RDXP35241 583 aaKnown RBP6.79□□□□□ -1.32
SCN2A-203ENST00000375437 HDGFL2Q7Z4V5 671 aaPredicted RBP6.79□□□□□ -1.32
SCN2A-203ENST00000375437 AKAP17AQ02040 695 aaKnown RBP6.79□□□□□ -1.32
SCN2A-203ENST00000375437 CREBRFQ8IUR6 639 aa6.79□□□□□ -1.32
SCN2A-203ENST00000375437 NACADO15069 1562 aa6.79□□□□□ -1.32
SCN2A-203ENST00000375437 CCDC43Q96MW1 224 aaKnown RBP6.79□□□□□ -1.32
SCN2A-203ENST00000375437 R3HCC1Q9Y3T6 440 aaKnown RBP6.78□□□□□ -1.32
SCN2A-203ENST00000375437 FBXO3Q9UK99 471 aa6.78□□□□□ -1.32
SCN2A-203ENST00000375437 ODF2Q5BJF6 829 aa6.78□□□□□ -1.32
SCN2A-203ENST00000375437 CARD11Q9BXL7 1154 aa6.78□□□□□ -1.32
SCN2A-203ENST00000375437 GPS2Q13227 327 aa6.77□□□□□ -1.33
SCN2A-203ENST00000375437 PES1O00541 588 aaKnown RBP6.77□□□□□ -1.33
SCN2A-203ENST00000375437 CCDC47Q96A33 483 aaKnown RBP6.77□□□□□ -1.33
SCN2A-203ENST00000375437 RB1CC1Q8TDY2 1594 aa6.77□□□□□ -1.33
SCN2A-203ENST00000375437 TMF1P82094 1093 aa6.77□□□□□ -1.33
SCN2A-203ENST00000375437 CFDP1Q9UEE9 299 aaPredicted RBP6.77□□□□□ -1.33
SCN2A-203ENST00000375437 EID1Q9Y6B2 187 aa6.76□□□□□ -1.33
SCN2A-203ENST00000375437 SOX12O15370 315 aa6.76□□□□□ -1.33
SCN2A-203ENST00000375437 STK31Q9BXU1 1019 aa6.76□□□□□ -1.33
SCN2A-203ENST00000375437 HMMRO75330 724 aa6.76□□□□□ -1.33
SCN2A-203ENST00000375437 MSH5O43196 834 aa6.75□□□□□ -1.33
SCN2A-203ENST00000375437 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.75□□□□□ -1.33
SCN2A-203ENST00000375437 PHF23Q9BUL5 403 aaPredicted RBP6.75□□□□□ -1.33
SCN2A-203ENST00000375437 HOOK1Q9UJC3 728 aaKnown RBP6.75□□□□□ -1.33
SCN2A-203ENST00000375437 TIMELESSQ9UNS1 1208 aa6.75□□□□□ -1.33
SCN2A-203ENST00000375437 MYO15BQ96JP2 1530 aa6.75□□□□□ -1.33
SCN2A-203ENST00000375437 AMER1Q5JTC6 1135 aaPredicted RBP6.75□□□□□ -1.33
SCN2A-203ENST00000375437 ANKRD20A12PQ8NF67 263 aa6.75□□□□□ -1.33
SCN2A-203ENST00000375437 SYNE3Q6ZMZ3 975 aa6.75□□□□□ -1.33
SCN2A-203ENST00000375437 RRP7BPQ9NSQ0 103 aa6.75□□□□□ -1.33
SCN2A-203ENST00000375437 EVA1CP58658 441 aa6.75□□□□□ -1.33
SCN2A-203ENST00000375437 RGS3P49796 1198 aa6.74□□□□□ -1.33
SCN2A-203ENST00000375437 SF3A1Q15459 793 aaKnown RBP6.74□□□□□ -1.33
SCN2A-203ENST00000375437 KIF16BQ96L93 1317 aa6.74□□□□□ -1.33
SCN2A-203ENST00000375437 IPO7O95373 1038 aaKnown RBP6.74□□□□□ -1.33
SCN2A-203ENST00000375437 WWC1Q8IX03 1113 aa6.74□□□□□ -1.33
SCN2A-203ENST00000375437 EIF3AQ14152 1382 aaKnown RBP6.74□□□□□ -1.33
SCN2A-203ENST00000375437 CDR1P51861 262 aa6.74□□□□□ -1.33
SCN2A-203ENST00000375437 ZRSR2Q15696 482 aaKnown RBP6.74□□□□□ -1.33
SCN2A-203ENST00000375437 CCAR1Q8IX12 1150 aaKnown RBP6.74□□□□□ -1.33
SCN2A-203ENST00000375437 MORC1Q86VD1 984 aa6.74□□□□□ -1.33
SCN2A-203ENST00000375437 PAF1Q8N7H5 531 aa6.73□□□□□ -1.33
SCN2A-203ENST00000375437 MLECQ14165 292 aa6.73□□□□□ -1.33
SCN2A-203ENST00000375437 CT47A1Q5JQC4 288 aaPredicted RBP6.73□□□□□ -1.33
SCN2A-203ENST00000375437 TOMM22Q9NS69 142 aa6.73□□□□□ -1.33
SCN2A-203ENST00000375437 TRIM6-TRIM34B2RNG4 842 aa6.73□□□□□ -1.33
SCN2A-203ENST00000375437 IRX6P78412 446 aaPredicted RBP6.73□□□□□ -1.33
SCN2A-203ENST00000375437 SMC4Q9NTJ3 1288 aa6.73□□□□□ -1.33
SCN2A-203ENST00000375437 MYO6Q9UM54 1294 aa6.73□□□□□ -1.33
SCN2A-203ENST00000375437 VPS37DQ86XT2 251 aa6.72□□□□□ -1.33
SCN2A-203ENST00000375437 H3BQV1 296 aa6.72□□□□□ -1.33
SCN2A-203ENST00000375437 IFFO2Q5TF58 517 aa6.72□□□□□ -1.33
SCN2A-203ENST00000375437 LMOD3Q0VAK6 560 aa6.72□□□□□ -1.33
SCN2A-203ENST00000375437 TRIM29Q14134 588 aa6.71□□□□□ -1.34
SCN2A-203ENST00000375437 CPLX2Q6PUV4 134 aaKnown RBP6.71□□□□□ -1.34
SCN2A-203ENST00000375437 GOLGA6L19H0YKK7 550 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms