RNA–Protein interactions for RNA: ENST00000374767.4

NIPSNAP3A-201, Transcript of nipsnap homolog 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPSNAP3A, Length 1,633 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3A-201ENST00000374767 KDM5BQ9UGL1 1544 aa20.43■□□□□ 0.86
NIPSNAP3A-201ENST00000374767 CAMSAP2Q08AD1 1489 aa20.41■□□□□ 0.86
NIPSNAP3A-201ENST00000374767 TIMELESSQ9UNS1 1208 aa20.4■□□□□ 0.86
NIPSNAP3A-201ENST00000374767 CHIC2Q9UKJ5 165 aa20.37■□□□□ 0.85
NIPSNAP3A-201ENST00000374767 GCC2Q8IWJ2 1684 aa20.37■□□□□ 0.85
NIPSNAP3A-201ENST00000374767 RRP7BPQ9NSQ0 103 aa20.36■□□□□ 0.85
NIPSNAP3A-201ENST00000374767 ADGRL2O95490 1459 aa20.35■□□□□ 0.85
NIPSNAP3A-201ENST00000374767 CDC42BPAQ5VT25 1732 aa20.34■□□□□ 0.85
NIPSNAP3A-201ENST00000374767 NCOA1Q15788 1441 aa20.33■□□□□ 0.85
NIPSNAP3A-201ENST00000374767 RSPH4AQ5TD94 716 aa20.33■□□□□ 0.84
NIPSNAP3A-201ENST00000374767 SHANK2Q9UPX8 1470 aa20.31■□□□□ 0.84
NIPSNAP3A-201ENST00000374767 ZNF316A6NFI3 1004 aaPredicted RBP20.31■□□□□ 0.84
NIPSNAP3A-201ENST00000374767 ZNF777Q9ULD5 760 aaPredicted RBP20.29■□□□□ 0.84
NIPSNAP3A-201ENST00000374767 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.29■□□□□ 0.84
NIPSNAP3A-201ENST00000374767 ZCCHC11Q5TAX3 1644 aaKnown RBP20.28■□□□□ 0.84
NIPSNAP3A-201ENST00000374767 ARHGEF5Q12774 1597 aa20.28■□□□□ 0.84
NIPSNAP3A-201ENST00000374767 MBD5Q9P267 1494 aa20.28■□□□□ 0.84
NIPSNAP3A-201ENST00000374767 PREX2Q70Z35 1606 aa20.27■□□□□ 0.84
NIPSNAP3A-201ENST00000374767 ANKRD30AQ9BXX3 1397 aa20.26■□□□□ 0.83
NIPSNAP3A-201ENST00000374767 KIAA1107Q9UPP5 1409 aa20.25■□□□□ 0.83
NIPSNAP3A-201ENST00000374767 PLCH2O75038 1416 aa20.24■□□□□ 0.83
NIPSNAP3A-201ENST00000374767 CROCC2H7BZ55 1655 aa20.23■□□□□ 0.83
NIPSNAP3A-201ENST00000374767 PLEKHH2Q8IVE3 1493 aa20.23■□□□□ 0.83
NIPSNAP3A-201ENST00000374767 KDM6BO15054 1643 aa20.23■□□□□ 0.83
NIPSNAP3A-201ENST00000374767 TSPY4P0CV99 314 aa20.23■□□□□ 0.83
NIPSNAP3A-201ENST00000374767 TSPY10P0CW01 314 aa20.23■□□□□ 0.83
NIPSNAP3A-201ENST00000374767 SIN3AQ96ST3 1273 aa20.23■□□□□ 0.83
NIPSNAP3A-201ENST00000374767 TTC37Q6PGP7 1564 aa20.22■□□□□ 0.83
NIPSNAP3A-201ENST00000374767 CDC42BPBQ9Y5S2 1711 aa20.22■□□□□ 0.83
NIPSNAP3A-201ENST00000374767 C9orf84Q5VXU9 1444 aa20.22■□□□□ 0.83
NIPSNAP3A-201ENST00000374767 DENND4BO75064 1496 aaPredicted RBP20.21■□□□□ 0.83
NIPSNAP3A-201ENST00000374767 ADGBQ8N7X0 1667 aa20.2■□□□□ 0.83
NIPSNAP3A-201ENST00000374767 SAMD9LQ8IVG5 1584 aa20.2■□□□□ 0.82
NIPSNAP3A-201ENST00000374767 MPHOSPH9Q99550 1183 aa20.2■□□□□ 0.82
NIPSNAP3A-201ENST00000374767 ARAP3Q8WWN8 1544 aa20.2■□□□□ 0.82
NIPSNAP3A-201ENST00000374767 CCDC141Q6ZP82 1450 aa20.2■□□□□ 0.82
NIPSNAP3A-201ENST00000374767 WDR7Q9Y4E6 1490 aa20.19■□□□□ 0.82
NIPSNAP3A-201ENST00000374767 HNRNPMP52272 730 aaKnown RBP eCLIP20.19■□□□□ 0.82
NIPSNAP3A-201ENST00000374767 KCNH8Q96L42 1107 aa20.19■□□□□ 0.82
NIPSNAP3A-201ENST00000374767 TRIM52Q96A61 297 aa20.18■□□□□ 0.82
NIPSNAP3A-201ENST00000374767 EFCAB2Q5VUJ9 269 aa20.17■□□□□ 0.82
NIPSNAP3A-201ENST00000374767 ARHGAP5Q13017 1502 aa20.17■□□□□ 0.82
NIPSNAP3A-201ENST00000374767 ANKRD50Q9ULJ7 1429 aa20.16■□□□□ 0.82
NIPSNAP3A-201ENST00000374767 NEUROD1Q13562 356 aa20.15■□□□□ 0.82
NIPSNAP3A-201ENST00000374767 MYO5CQ9NQX4 1742 aa20.15■□□□□ 0.82
NIPSNAP3A-201ENST00000374767 PPP1R15AO75807 674 aaPredicted RBP20.14■□□□□ 0.81
NIPSNAP3A-201ENST00000374767 MAST1Q9Y2H9 1570 aa20.13■□□□□ 0.81
NIPSNAP3A-201ENST00000374767 DIEXFQ68CQ4 756 aaKnown RBP20.13■□□□□ 0.81
NIPSNAP3A-201ENST00000374767 ANKRD30BQ9BXX2 1392 aa20.1■□□□□ 0.81
NIPSNAP3A-201ENST00000374767 KIF15Q9NS87 1388 aa20.1■□□□□ 0.81
NIPSNAP3A-201ENST00000374767 SYCP2Q9BX26 1530 aa20.1■□□□□ 0.81
NIPSNAP3A-201ENST00000374767 ASXL2Q76L83 1435 aa20.1■□□□□ 0.81
NIPSNAP3A-201ENST00000374767 PZPP20742 1482 aa20.09■□□□□ 0.81
NIPSNAP3A-201ENST00000374767 TONSLQ96HA7 1378 aa20.09■□□□□ 0.81
NIPSNAP3A-201ENST00000374767 NPM1P06748 294 aaKnown RBP eCLIP20.09■□□□□ 0.81
NIPSNAP3A-201ENST00000374767 SLC4A1APQ9BWU0 796 aaKnown RBP20.08■□□□□ 0.8
NIPSNAP3A-201ENST00000374767 ABCA9Q8IUA7 1624 aa20.07■□□□□ 0.8
NIPSNAP3A-201ENST00000374767 ARHGEF12Q9NZN5 1544 aa20.07■□□□□ 0.8
NIPSNAP3A-201ENST00000374767 ABCC1P33527 1531 aa20.05■□□□□ 0.8
NIPSNAP3A-201ENST00000374767 KDM5DQ9BY66 1539 aa20.05■□□□□ 0.8
NIPSNAP3A-201ENST00000374767 RTEL1-TNFRSF6BF6WH68 1400 aa20.02■□□□□ 0.8
NIPSNAP3A-201ENST00000374767 PLXNC1O60486 1568 aa20.02■□□□□ 0.8
NIPSNAP3A-201ENST00000374767 RPRD2Q5VT52 1461 aaKnown RBP20.01■□□□□ 0.79
NIPSNAP3A-201ENST00000374767 NUP155O75694 1391 aa19.99■□□□□ 0.79
NIPSNAP3A-201ENST00000374767 TRAPPC8Q9Y2L5 1435 aa19.99■□□□□ 0.79
NIPSNAP3A-201ENST00000374767 FANCAO15360 1455 aa19.98■□□□□ 0.79
NIPSNAP3A-201ENST00000374767 DUOX2Q9NRD8 1548 aa19.97■□□□□ 0.79
NIPSNAP3A-201ENST00000374767 FOXD1Q16676 465 aa19.96■□□□□ 0.79
NIPSNAP3A-201ENST00000374767 ERBINQ96RT1 1412 aa19.96■□□□□ 0.79
NIPSNAP3A-201ENST00000374767 PKD2Q13563 968 aa19.95■□□□□ 0.78
NIPSNAP3A-201ENST00000374767 SPAG9O60271 1321 aaKnown RBP19.92■□□□□ 0.78
NIPSNAP3A-201ENST00000374767 L3MBTL2Q969R5 705 aa19.91■□□□□ 0.78
NIPSNAP3A-201ENST00000374767 UNC13BO14795 1591 aa19.9■□□□□ 0.78
NIPSNAP3A-201ENST00000374767 AFAP1Q8N556 730 aa19.9■□□□□ 0.78
NIPSNAP3A-201ENST00000374767 CD109Q6YHK3 1445 aa19.9■□□□□ 0.78
NIPSNAP3A-201ENST00000374767 ADGRL1O94910 1474 aa19.89■□□□□ 0.77
NIPSNAP3A-201ENST00000374767 SCAPERQ9BY12 1400 aa19.89■□□□□ 0.77
NIPSNAP3A-201ENST00000374767 MAGI2Q86UL8 1455 aa19.89■□□□□ 0.77
NIPSNAP3A-201ENST00000374767 TEX14Q8IWB6 1497 aa19.89■□□□□ 0.77
NIPSNAP3A-201ENST00000374767 ZFYVE16Q7Z3T8 1539 aa19.88■□□□□ 0.77
NIPSNAP3A-201ENST00000374767 FAM135AQ9P2D6 1515 aa19.88■□□□□ 0.77
NIPSNAP3A-201ENST00000374767 CYB5RLQ6IPT4 315 aa19.84■□□□□ 0.77
NIPSNAP3A-201ENST00000374767 INO80Q9ULG1 1556 aaPredicted RBP19.83■□□□□ 0.76
NIPSNAP3A-201ENST00000374767 CFAP74Q9C0B2 1584 aa19.82■□□□□ 0.76
NIPSNAP3A-201ENST00000374767 RIMBP3CA6NJZ7 1639 aa19.82■□□□□ 0.76
NIPSNAP3A-201ENST00000374767 RIMBP3BA6NNM3 1639 aa19.82■□□□□ 0.76
NIPSNAP3A-201ENST00000374767 RIMBP3Q9UFD9 1639 aa19.82■□□□□ 0.76
NIPSNAP3A-201ENST00000374767 ZNF518AQ6AHZ1 1483 aa19.82■□□□□ 0.76
NIPSNAP3A-201ENST00000374767 NEO1Q92859 1461 aa19.82■□□□□ 0.76
NIPSNAP3A-201ENST00000374767 IQGAP3Q86VI3 1631 aa19.82■□□□□ 0.76
NIPSNAP3A-201ENST00000374767 ATP7AQ04656 1500 aa19.81■□□□□ 0.76
NIPSNAP3A-201ENST00000374767 ATP10AO60312 1499 aa19.8■□□□□ 0.76
NIPSNAP3A-201ENST00000374767 DHX29Q7Z478 1369 aaKnown RBP19.8■□□□□ 0.76
NIPSNAP3A-201ENST00000374767 GLI2P10070 1586 aa19.79■□□□□ 0.76
NIPSNAP3A-201ENST00000374767 POGZQ7Z3K3 1410 aa19.77■□□□□ 0.76
NIPSNAP3A-201ENST00000374767 MIER1Q8N108 512 aa19.76■□□□□ 0.75
NIPSNAP3A-201ENST00000374767 MLH3Q9UHC1 1453 aa19.76■□□□□ 0.75
NIPSNAP3A-201ENST00000374767 KDM5CP41229 1560 aa19.75■□□□□ 0.75
NIPSNAP3A-201ENST00000374767 NBPF8Q3BBV2 869 aa19.75■□□□□ 0.75
NIPSNAP3A-201ENST00000374767 UHRF1BP1Q6BDS2 1440 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms