RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 TROQ12816 1431 aaPredicted RBP26.09■■□□□ 1.77
RXRB-202ENST00000374685 MPHOSPH9Q99550 1183 aa26.06■■□□□ 1.76
RXRB-202ENST00000374685 DAPK1P53355 1430 aa26.06■■□□□ 1.76
RXRB-202ENST00000374685 ABCC5O15440 1437 aa26.04■■□□□ 1.76
RXRB-202ENST00000374685 KIF14Q15058 1648 aa26.03■■□□□ 1.76
RXRB-202ENST00000374685 TIMELESSQ9UNS1 1208 aa26.02■■□□□ 1.76
RXRB-202ENST00000374685 PTPRGP23470 1445 aa26.02■■□□□ 1.76
RXRB-202ENST00000374685 SLC4A1APQ9BWU0 796 aaKnown RBP25.99■■□□□ 1.75
RXRB-202ENST00000374685 KCNH8Q96L42 1107 aa25.98■■□□□ 1.75
RXRB-202ENST00000374685 ATP10BO94823 1461 aa25.97■■□□□ 1.75
RXRB-202ENST00000374685 GPATCH8Q9UKJ3 1502 aaKnown RBP25.96■■□□□ 1.75
RXRB-202ENST00000374685 CAMSAP2Q08AD1 1489 aa25.96■■□□□ 1.75
RXRB-202ENST00000374685 DENND4BO75064 1496 aaPredicted RBP25.92■■□□□ 1.74
RXRB-202ENST00000374685 CHD1O14646 1710 aa25.92■■□□□ 1.74
RXRB-202ENST00000374685 GCC2Q8IWJ2 1684 aa25.92■■□□□ 1.74
RXRB-202ENST00000374685 HNRNPMP52272 730 aaKnown RBP eCLIP25.92■■□□□ 1.74
RXRB-202ENST00000374685 DNMT1P26358 1616 aaKnown RBP25.89■■□□□ 1.73
RXRB-202ENST00000374685 L3MBTL2Q969R5 705 aa25.88■■□□□ 1.73
RXRB-202ENST00000374685 ABCA8O94911 1581 aa25.87■■□□□ 1.73
RXRB-202ENST00000374685 AKNAQ7Z591 1439 aa25.87■■□□□ 1.73
RXRB-202ENST00000374685 ROCK1Q13464 1354 aa25.85■■□□□ 1.73
RXRB-202ENST00000374685 ERCC6L2Q5T890 1561 aa25.82■■□□□ 1.72
RXRB-202ENST00000374685 TSPY4P0CV99 314 aa25.82■■□□□ 1.72
RXRB-202ENST00000374685 TSPY10P0CW01 314 aa25.82■■□□□ 1.72
RXRB-202ENST00000374685 ZNF326Q5BKZ1 582 aaKnown RBP25.81■■□□□ 1.72
RXRB-202ENST00000374685 NCOA1Q15788 1441 aa25.81■■□□□ 1.72
RXRB-202ENST00000374685 ITSN2Q9NZM3 1697 aa25.79■■□□□ 1.72
RXRB-202ENST00000374685 ANKRD30AQ9BXX3 1397 aa25.77■■□□□ 1.72
RXRB-202ENST00000374685 PKD2Q13563 968 aa25.77■■□□□ 1.72
RXRB-202ENST00000374685 HSPA5P11021 654 aaKnown RBP25.76■■□□□ 1.71
RXRB-202ENST00000374685 ABCC10Q5T3U5 1492 aa25.73■■□□□ 1.71
RXRB-202ENST00000374685 ANKRD30BQ9BXX2 1392 aa25.73■■□□□ 1.71
RXRB-202ENST00000374685 ADCY10Q96PN6 1610 aa25.72■■□□□ 1.71
RXRB-202ENST00000374685 CDC42BPAQ5VT25 1732 aa25.72■■□□□ 1.71
RXRB-202ENST00000374685 KDM5BQ9UGL1 1544 aa25.72■■□□□ 1.71
RXRB-202ENST00000374685 ANKRD50Q9ULJ7 1429 aa25.71■■□□□ 1.71
RXRB-202ENST00000374685 ANP32CO43423 234 aa25.71■■□□□ 1.71
RXRB-202ENST00000374685 C9orf84Q5VXU9 1444 aa25.71■■□□□ 1.71
RXRB-202ENST00000374685 NBPF8Q3BBV2 869 aa25.7■■□□□ 1.7
RXRB-202ENST00000374685 NUP155O75694 1391 aa25.7■■□□□ 1.7
RXRB-202ENST00000374685 EIF4G2P78344 907 aaKnown RBP eCLIP25.68■■□□□ 1.7
RXRB-202ENST00000374685 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.66■■□□□ 1.71e-7■□□□□ 10.6
RXRB-202ENST00000374685 PZPP20742 1482 aa25.66■■□□□ 1.7
RXRB-202ENST00000374685 KIF15Q9NS87 1388 aa25.64■■□□□ 1.7
RXRB-202ENST00000374685 CNGB1Q14028 1251 aaPredicted RBP25.63■■□□□ 1.69
RXRB-202ENST00000374685 BCL11AQ9H165 835 aa25.62■■□□□ 1.69
RXRB-202ENST00000374685 POLR3GLQ9BT43 218 aa25.62■■□□□ 1.69
RXRB-202ENST00000374685 RPRD2Q5VT52 1461 aaKnown RBP25.61■■□□□ 1.69
RXRB-202ENST00000374685 WASHC2AQ641Q2 1341 aa25.6■■□□□ 1.69
RXRB-202ENST00000374685 ARHGAP5Q13017 1502 aa25.59■■□□□ 1.69
RXRB-202ENST00000374685 ADGBQ8N7X0 1667 aa25.59■■□□□ 1.69
RXRB-202ENST00000374685 KDM2AQ9Y2K7 1162 aa25.59■■□□□ 1.69
RXRB-202ENST00000374685 ADGRL2O95490 1459 aa25.58■■□□□ 1.69
RXRB-202ENST00000374685 CROCC2H7BZ55 1655 aa25.57■■□□□ 1.68
RXRB-202ENST00000374685 C11orf95C9JLR9 678 aaPredicted RBP25.56■■□□□ 1.68
RXRB-202ENST00000374685 KIAA1107Q9UPP5 1409 aa25.55■■□□□ 1.68
RXRB-202ENST00000374685 SHROOM2Q13796 1616 aa25.55■■□□□ 1.68
RXRB-202ENST00000374685 TTC37Q6PGP7 1564 aa25.55■■□□□ 1.68
RXRB-202ENST00000374685 ABCC2Q92887 1545 aa25.53■■□□□ 1.68
RXRB-202ENST00000374685 MBD5Q9P267 1494 aa25.53■■□□□ 1.68
RXRB-202ENST00000374685 SAMD9LQ8IVG5 1584 aa25.53■■□□□ 1.68
RXRB-202ENST00000374685 SYCP2Q9BX26 1530 aa25.53■■□□□ 1.68
RXRB-202ENST00000374685 CDC42BPBQ9Y5S2 1711 aa25.52■■□□□ 1.68
RXRB-202ENST00000374685 TEX14Q8IWB6 1497 aa25.51■■□□□ 1.68
RXRB-202ENST00000374685 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.51■■□□□ 1.67
RXRB-202ENST00000374685 CCDC141Q6ZP82 1450 aa25.51■■□□□ 1.67
RXRB-202ENST00000374685 MYT1LQ9UL68 1186 aa25.48■■□□□ 1.67
RXRB-202ENST00000374685 RGL3Q3MIN7 710 aa25.47■■□□□ 1.67
RXRB-202ENST00000374685 SHANK2Q9UPX8 1470 aa25.46■■□□□ 1.67
RXRB-202ENST00000374685 PREX2Q70Z35 1606 aa25.46■■□□□ 1.67
RXRB-202ENST00000374685 ANP32EQ9BTT0 268 aa25.45■■□□□ 1.66
RXRB-202ENST00000374685 DCAF11Q8TEB1 546 aa25.44■■□□□ 1.66
RXRB-202ENST00000374685 CLASP1Q7Z460 1538 aa25.43■■□□□ 1.66
RXRB-202ENST00000374685 EFCAB2Q5VUJ9 269 aa25.42■■□□□ 1.66
RXRB-202ENST00000374685 RSPH4AQ5TD94 716 aa25.41■■□□□ 1.66
RXRB-202ENST00000374685 AFAP1Q8N556 730 aa25.41■■□□□ 1.66
RXRB-202ENST00000374685 CCER2I3L3R5 266 aa25.39■■□□□ 1.66
RXRB-202ENST00000374685 ZCCHC11Q5TAX3 1644 aaKnown RBP25.39■■□□□ 1.65
RXRB-202ENST00000374685 ARHGEF5Q12774 1597 aa25.38■■□□□ 1.65
RXRB-202ENST00000374685 CCDC7Q96M83 1385 aa25.37■■□□□ 1.65
RXRB-202ENST00000374685 KIF7Q2M1P5 1343 aa25.36■■□□□ 1.65
RXRB-202ENST00000374685 ARHGEF12Q9NZN5 1544 aa25.36■■□□□ 1.65
RXRB-202ENST00000374685 PLEKHH2Q8IVE3 1493 aa25.35■■□□□ 1.65
RXRB-202ENST00000374685 CARD11Q9BXL7 1154 aa25.35■■□□□ 1.65
RXRB-202ENST00000374685 MYO5CQ9NQX4 1742 aa25.34■■□□□ 1.65
RXRB-202ENST00000374685 USP47Q96K76 1375 aa25.33■■□□□ 1.65
RXRB-202ENST00000374685 CCDC184Q52MB2 194 aa25.32■■□□□ 1.64
RXRB-202ENST00000374685 PLCH2O75038 1416 aa25.32■■□□□ 1.64
RXRB-202ENST00000374685 TRAPPC8Q9Y2L5 1435 aa25.31■■□□□ 1.64
RXRB-202ENST00000374685 BCANQ96GW7 911 aa25.31■■□□□ 1.64
RXRB-202ENST00000374685 FAM135AQ9P2D6 1515 aa25.3■■□□□ 1.64
RXRB-202ENST00000374685 HNRNPUQ00839 825 aaKnown RBP eCLIP25.29■■□□□ 1.64
RXRB-202ENST00000374685 SUPT16HQ9Y5B9 1047 aaKnown RBP25.29■■□□□ 1.64
RXRB-202ENST00000374685 SPAG9O60271 1321 aaKnown RBP25.28■■□□□ 1.64
RXRB-202ENST00000374685 CNTLNQ9NXG0 1405 aa25.28■■□□□ 1.64
RXRB-202ENST00000374685 FAM9BQ8IZU0 186 aa25.26■■□□□ 1.63
RXRB-202ENST00000374685 CCDC144AA2RUR9 1427 aa25.25■■□□□ 1.63
RXRB-202ENST00000374685 OSCARQ8IYS5 282 aa25.25■■□□□ 1.63
RXRB-202ENST00000374685 SPATA31E1Q6ZUB1 1445 aa25.25■■□□□ 1.63
RXRB-202ENST00000374685 UHRF1BP1LA0JNW5 1464 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms