RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 MAPKBP1O60336 1514 aa23.15■■□□□ 1.3
HDAC8-209ENST00000373589 ZCCHC11Q5TAX3 1644 aaKnown RBP23.14■■□□□ 1.29
HDAC8-209ENST00000373589 ROCK1Q13464 1354 aa23.13■■□□□ 1.29
HDAC8-209ENST00000373589 AEBP2Q6ZN18 517 aaPredicted RBP23.13■■□□□ 1.29
HDAC8-209ENST00000373589 CHIC2Q9UKJ5 165 aa23.13■■□□□ 1.29
HDAC8-209ENST00000373589 GCC2Q8IWJ2 1684 aa23.12■■□□□ 1.29
HDAC8-209ENST00000373589 RRP7BPQ9NSQ0 103 aa23.1■■□□□ 1.29
HDAC8-209ENST00000373589 ZNF777Q9ULD5 760 aaPredicted RBP23.08■■□□□ 1.28
HDAC8-209ENST00000373589 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.07■■□□□ 1.28
HDAC8-209ENST00000373589 PREX2Q70Z35 1606 aa23.06■■□□□ 1.28
HDAC8-209ENST00000373589 TTC37Q6PGP7 1564 aa23.05■■□□□ 1.28
HDAC8-209ENST00000373589 CDC42BPBQ9Y5S2 1711 aa23.03■■□□□ 1.28
HDAC8-209ENST00000373589 CROCC2H7BZ55 1655 aa23.02■■□□□ 1.28
HDAC8-209ENST00000373589 ADGRL2O95490 1459 aa23.01■■□□□ 1.27
HDAC8-209ENST00000373589 KDM6BO15054 1643 aa23.01■■□□□ 1.27
HDAC8-209ENST00000373589 SHANK2Q9UPX8 1470 aa22.99■■□□□ 1.27
HDAC8-209ENST00000373589 NCOA1Q15788 1441 aa22.99■■□□□ 1.27
HDAC8-209ENST00000373589 ARHGEF5Q12774 1597 aa22.98■■□□□ 1.27
HDAC8-209ENST00000373589 SAMD9LQ8IVG5 1584 aa22.98■■□□□ 1.27
HDAC8-209ENST00000373589 MBD5Q9P267 1494 aa22.98■■□□□ 1.27
HDAC8-209ENST00000373589 KCNH8Q96L42 1107 aa22.98■■□□□ 1.27
HDAC8-209ENST00000373589 ADGBQ8N7X0 1667 aa22.98■■□□□ 1.27
HDAC8-209ENST00000373589 ACIN1Q9UKV3 1341 aaKnown RBP22.96■■□□□ 1.27
HDAC8-209ENST00000373589 MYO5CQ9NQX4 1742 aa22.96■■□□□ 1.27
HDAC8-209ENST00000373589 WDR7Q9Y4E6 1490 aa22.95■■□□□ 1.26
HDAC8-209ENST00000373589 ARHGAP5Q13017 1502 aa22.94■■□□□ 1.26
HDAC8-209ENST00000373589 PLCH2O75038 1416 aa22.94■■□□□ 1.26
HDAC8-209ENST00000373589 ANKRD30AQ9BXX3 1397 aa22.93■■□□□ 1.26
HDAC8-209ENST00000373589 C9orf84Q5VXU9 1444 aa22.92■■□□□ 1.26
HDAC8-209ENST00000373589 HNRNPMP52272 730 aaKnown RBP eCLIP22.91■■□□□ 1.26
HDAC8-209ENST00000373589 RSPH4AQ5TD94 716 aa22.91■■□□□ 1.26
HDAC8-209ENST00000373589 KIAA1107Q9UPP5 1409 aa22.9■■□□□ 1.26
HDAC8-209ENST00000373589 CCDC141Q6ZP82 1450 aa22.9■■□□□ 1.26
HDAC8-209ENST00000373589 PLEKHH2Q8IVE3 1493 aa22.89■■□□□ 1.26
HDAC8-209ENST00000373589 SIN3AQ96ST3 1273 aa22.89■■□□□ 1.26
HDAC8-209ENST00000373589 DENND4BO75064 1496 aaPredicted RBP22.89■■□□□ 1.25
HDAC8-209ENST00000373589 TSPY4P0CV99 314 aa22.88■■□□□ 1.25
HDAC8-209ENST00000373589 TSPY10P0CW01 314 aa22.88■■□□□ 1.25
HDAC8-209ENST00000373589 ARAP3Q8WWN8 1544 aa22.87■■□□□ 1.25
HDAC8-209ENST00000373589 SYCP2Q9BX26 1530 aa22.87■■□□□ 1.25
HDAC8-209ENST00000373589 ASXL2Q76L83 1435 aa22.87■■□□□ 1.25
HDAC8-209ENST00000373589 TRIM52Q96A61 297 aa22.87■■□□□ 1.25
HDAC8-209ENST00000373589 TIMELESSQ9UNS1 1208 aa22.87■■□□□ 1.25
HDAC8-209ENST00000373589 EFCAB2Q5VUJ9 269 aa22.84■■□□□ 1.25
HDAC8-209ENST00000373589 ZNF316A6NFI3 1004 aaPredicted RBP22.83■■□□□ 1.25
HDAC8-209ENST00000373589 MPHOSPH9Q99550 1183 aa22.83■■□□□ 1.25
HDAC8-209ENST00000373589 ABCA9Q8IUA7 1624 aa22.83■■□□□ 1.24
HDAC8-209ENST00000373589 NEUROD1Q13562 356 aa22.82■■□□□ 1.24
HDAC8-209ENST00000373589 ANKRD50Q9ULJ7 1429 aa22.82■■□□□ 1.24
HDAC8-209ENST00000373589 MAST1Q9Y2H9 1570 aa22.82■■□□□ 1.24
HDAC8-209ENST00000373589 ARHGEF12Q9NZN5 1544 aa22.82■■□□□ 1.24
HDAC8-209ENST00000373589 NPM1P06748 294 aaKnown RBP eCLIP22.81■■□□□ 1.24
HDAC8-209ENST00000373589 ABCC1P33527 1531 aa22.79■■□□□ 1.24
HDAC8-209ENST00000373589 KIF15Q9NS87 1388 aa22.78■■□□□ 1.24
HDAC8-209ENST00000373589 PZPP20742 1482 aa22.76■■□□□ 1.23
HDAC8-209ENST00000373589 PLXNC1O60486 1568 aa22.72■■□□□ 1.23
HDAC8-209ENST00000373589 SLC4A1APQ9BWU0 796 aaKnown RBP22.71■■□□□ 1.23
HDAC8-209ENST00000373589 TRAPPC8Q9Y2L5 1435 aa22.71■■□□□ 1.23
HDAC8-209ENST00000373589 FANCAO15360 1455 aa22.71■■□□□ 1.23
HDAC8-209ENST00000373589 ANKRD30BQ9BXX2 1392 aa22.7■■□□□ 1.22
HDAC8-209ENST00000373589 RIMBP3CA6NJZ7 1639 aa22.7■■□□□ 1.22
HDAC8-209ENST00000373589 RIMBP3BA6NNM3 1639 aa22.7■■□□□ 1.22
HDAC8-209ENST00000373589 RIMBP3Q9UFD9 1639 aa22.7■■□□□ 1.22
HDAC8-209ENST00000373589 KDM5DQ9BY66 1539 aa22.69■■□□□ 1.22
HDAC8-209ENST00000373589 PPP1R15AO75807 674 aaPredicted RBP22.69■■□□□ 1.22
HDAC8-209ENST00000373589 TONSLQ96HA7 1378 aa22.69■■□□□ 1.22
HDAC8-209ENST00000373589 FOXD1Q16676 465 aa22.67■■□□□ 1.22
HDAC8-209ENST00000373589 DIEXFQ68CQ4 756 aaKnown RBP22.64■■□□□ 1.21
HDAC8-209ENST00000373589 CYB5RLQ6IPT4 315 aa22.64■■□□□ 1.21
HDAC8-209ENST00000373589 NUP155O75694 1391 aa22.64■■□□□ 1.21
HDAC8-209ENST00000373589 RTEL1-TNFRSF6BF6WH68 1400 aa22.64■■□□□ 1.21
HDAC8-209ENST00000373589 DUOX2Q9NRD8 1548 aa22.63■■□□□ 1.21
HDAC8-209ENST00000373589 ADGRL1O94910 1474 aa22.61■■□□□ 1.21
HDAC8-209ENST00000373589 CD109Q6YHK3 1445 aa22.61■■□□□ 1.21
HDAC8-209ENST00000373589 AFAP1Q8N556 730 aa22.61■■□□□ 1.21
HDAC8-209ENST00000373589 RPRD2Q5VT52 1461 aaKnown RBP22.6■■□□□ 1.21
HDAC8-209ENST00000373589 ERBINQ96RT1 1412 aa22.6■■□□□ 1.21
HDAC8-209ENST00000373589 SPAG9O60271 1321 aaKnown RBP22.6■■□□□ 1.21
HDAC8-209ENST00000373589 ZFYVE16Q7Z3T8 1539 aa22.59■■□□□ 1.21
HDAC8-209ENST00000373589 SCAPERQ9BY12 1400 aa22.59■■□□□ 1.21
HDAC8-209ENST00000373589 PKD2Q13563 968 aa22.59■■□□□ 1.21
HDAC8-209ENST00000373589 UNC13BO14795 1591 aa22.58■■□□□ 1.21
HDAC8-209ENST00000373589 INO80Q9ULG1 1556 aaPredicted RBP22.55■■□□□ 1.2
HDAC8-209ENST00000373589 CFAP74Q9C0B2 1584 aa22.55■■□□□ 1.2
HDAC8-209ENST00000373589 FAM135AQ9P2D6 1515 aa22.54■■□□□ 1.2
HDAC8-209ENST00000373589 MAGI2Q86UL8 1455 aa22.53■■□□□ 1.2
HDAC8-209ENST00000373589 ATP7AQ04656 1500 aa22.52■■□□□ 1.2
HDAC8-209ENST00000373589 TEX14Q8IWB6 1497 aa22.5■■□□□ 1.19
HDAC8-209ENST00000373589 L3MBTL2Q969R5 705 aa22.5■■□□□ 1.19
HDAC8-209ENST00000373589 GLI2P10070 1586 aa22.49■■□□□ 1.19
HDAC8-209ENST00000373589 ZNF518AQ6AHZ1 1483 aa22.49■■□□□ 1.19
HDAC8-209ENST00000373589 IQGAP3Q86VI3 1631 aa22.48■■□□□ 1.19
HDAC8-209ENST00000373589 NEO1Q92859 1461 aa22.48■■□□□ 1.19
HDAC8-209ENST00000373589 MAP3K4Q9Y6R4 1608 aa22.46■■□□□ 1.19
HDAC8-209ENST00000373589 POGZQ7Z3K3 1410 aa22.46■■□□□ 1.19
HDAC8-209ENST00000373589 KDM5CP41229 1560 aa22.44■■□□□ 1.18
HDAC8-209ENST00000373589 KIDINS220Q9ULH0 1771 aa22.43■■□□□ 1.18
HDAC8-209ENST00000373589 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.43■■□□□ 1.18
HDAC8-209ENST00000373589 DHX29Q7Z478 1369 aaKnown RBP22.42■■□□□ 1.18
HDAC8-209ENST00000373589 DEPDC5O75140 1603 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms