RNA–Protein interactions for RNA: ENST00000373573.7

HDAC8-207, Transcript of histone deacetylase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC8, Length 2,014 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-207ENST00000373573 GCC2Q8IWJ2 1684 aa18.37■□□□□ 0.53
HDAC8-207ENST00000373573 HECW1Q76N89 1606 aa18.35■□□□□ 0.53
HDAC8-207ENST00000373573 TCOF1Q13428 1488 aaKnown RBP18.35■□□□□ 0.53
HDAC8-207ENST00000373573 RBM19Q9Y4C8 960 aaKnown RBP18.33■□□□□ 0.53
HDAC8-207ENST00000373573 ERCC6L2Q5T890 1561 aa18.33■□□□□ 0.53
HDAC8-207ENST00000373573 AKNAQ7Z591 1439 aa18.33■□□□□ 0.52
HDAC8-207ENST00000373573 MAGI3Q5TCQ9 1506 aa18.32■□□□□ 0.52
HDAC8-207ENST00000373573 RAPGEF6Q8TEU7 1601 aa18.32■□□□□ 0.52
HDAC8-207ENST00000373573 DENND4BO75064 1496 aaPredicted RBP18.3■□□□□ 0.52
HDAC8-207ENST00000373573 WASHC2AQ641Q2 1341 aa18.28■□□□□ 0.52
HDAC8-207ENST00000373573 HSPA5P11021 654 aaKnown RBP18.27■□□□□ 0.52
HDAC8-207ENST00000373573 RIMBP3CA6NJZ7 1639 aa18.27■□□□□ 0.52
HDAC8-207ENST00000373573 RIMBP3BA6NNM3 1639 aa18.27■□□□□ 0.52
HDAC8-207ENST00000373573 RIMBP3Q9UFD9 1639 aa18.27■□□□□ 0.52
HDAC8-207ENST00000373573 ABCA8O94911 1581 aa18.26■□□□□ 0.51
HDAC8-207ENST00000373573 PLB1Q6P1J6 1458 aa18.26■□□□□ 0.51
HDAC8-207ENST00000373573 HNRNPUQ00839 825 aaKnown RBP eCLIP18.26■□□□□ 0.51
HDAC8-207ENST00000373573 KDM6BO15054 1643 aa18.25■□□□□ 0.51
HDAC8-207ENST00000373573 RRP7BPQ9NSQ0 103 aa18.25■□□□□ 0.51
HDAC8-207ENST00000373573 NUP153P49790 1475 aaKnown RBP18.24■□□□□ 0.51
HDAC8-207ENST00000373573 EPRSP07814 1512 aaKnown RBP18.24■□□□□ 0.51
HDAC8-207ENST00000373573 PTPRGP23470 1445 aa18.23■□□□□ 0.51
HDAC8-207ENST00000373573 MIA2Q96PC5 1412 aa18.23■□□□□ 0.51
HDAC8-207ENST00000373573 CNTLNQ9NXG0 1405 aa18.23■□□□□ 0.51
HDAC8-207ENST00000373573 EIF4G2P78344 907 aaKnown RBP eCLIP18.22■□□□□ 0.51
HDAC8-207ENST00000373573 CDK13Q14004 1512 aaKnown RBP18.21■□□□□ 0.51
HDAC8-207ENST00000373573 CHIC2Q9UKJ5 165 aa18.21■□□□□ 0.51
HDAC8-207ENST00000373573 ERICH6BQ5W0A0 696 aa18.18■□□□□ 0.5
HDAC8-207ENST00000373573 MPHOSPH9Q99550 1183 aa18.18■□□□□ 0.5
HDAC8-207ENST00000373573 NCOA1Q15788 1441 aa18.17■□□□□ 0.5
HDAC8-207ENST00000373573 L3MBTL2Q969R5 705 aa18.15■□□□□ 0.5
HDAC8-207ENST00000373573 CCDC7Q96M83 1385 aa18.15■□□□□ 0.5
HDAC8-207ENST00000373573 ABCC2Q92887 1545 aa18.14■□□□□ 0.49
HDAC8-207ENST00000373573 ROCK1Q13464 1354 aa18.13■□□□□ 0.49
HDAC8-207ENST00000373573 RPRD2Q5VT52 1461 aaKnown RBP18.12■□□□□ 0.49
HDAC8-207ENST00000373573 FANCIQ9NVI1 1328 aa18.12■□□□□ 0.49
HDAC8-207ENST00000373573 ARID3CA6NKF2 412 aa18.12■□□□□ 0.49
HDAC8-207ENST00000373573 CDK11AQ9UQ88 783 aaPredicted RBP18.12■□□□□ 0.49
HDAC8-207ENST00000373573 ANKRD30BQ9BXX2 1392 aa18.11■□□□□ 0.49
HDAC8-207ENST00000373573 IRX6P78412 446 aaPredicted RBP18.11■□□□□ 0.49
HDAC8-207ENST00000373573 PRKRIP1Q9H875 184 aaPredicted RBP18.11■□□□□ 0.49
HDAC8-207ENST00000373573 POLR1AO95602 1720 aaPredicted RBP18.11■□□□□ 0.49
HDAC8-207ENST00000373573 TEX14Q8IWB6 1497 aa18.11■□□□□ 0.49
HDAC8-207ENST00000373573 CCDC184Q52MB2 194 aa18.1■□□□□ 0.49
HDAC8-207ENST00000373573 C11orf95C9JLR9 678 aaPredicted RBP18.1■□□□□ 0.49
HDAC8-207ENST00000373573 DAPK1P53355 1430 aa18.09■□□□□ 0.49
HDAC8-207ENST00000373573 UHRF1BP1LA0JNW5 1464 aa18.09■□□□□ 0.49
HDAC8-207ENST00000373573 ATP10BO94823 1461 aa18.09■□□□□ 0.49
HDAC8-207ENST00000373573 DNMT1P26358 1616 aaKnown RBP18.09■□□□□ 0.49
HDAC8-207ENST00000373573 MSH5O43196 834 aa18.09■□□□□ 0.49
HDAC8-207ENST00000373573 PPP4R2Q9NY27 417 aa18.08■□□□□ 0.49
HDAC8-207ENST00000373573 SPATA31E1Q6ZUB1 1445 aa18.07■□□□□ 0.48
HDAC8-207ENST00000373573 FOXD1Q16676 465 aa18.06■□□□□ 0.48
HDAC8-207ENST00000373573 ADCY10Q96PN6 1610 aa18.06■□□□□ 0.48
HDAC8-207ENST00000373573 ZBED9Q6R2W3 1325 aa18.06■□□□□ 0.48
HDAC8-207ENST00000373573 NBPF8Q3BBV2 869 aa18.06■□□□□ 0.48
HDAC8-207ENST00000373573 ABCC5O15440 1437 aa18.05■□□□□ 0.48
HDAC8-207ENST00000373573 ZCCHC11Q5TAX3 1644 aaKnown RBP18.04■□□□□ 0.48
HDAC8-207ENST00000373573 CYB5RLQ6IPT4 315 aa18.04■□□□□ 0.48
HDAC8-207ENST00000373573 MRS2Q9HD23 443 aa18.04■□□□□ 0.48
HDAC8-207ENST00000373573 TROQ12816 1431 aaPredicted RBP18.03■□□□□ 0.48
HDAC8-207ENST00000373573 KIF7Q2M1P5 1343 aa18.02■□□□□ 0.48
HDAC8-207ENST00000373573 FAM9BQ8IZU0 186 aa18.01■□□□□ 0.47
HDAC8-207ENST00000373573 KIF14Q15058 1648 aa18■□□□□ 0.47
HDAC8-207ENST00000373573 SLC4A1APQ9BWU0 796 aaKnown RBP17.97■□□□□ 0.47
HDAC8-207ENST00000373573 BCL11AQ9H165 835 aa17.97■□□□□ 0.47
HDAC8-207ENST00000373573 PZPP20742 1482 aa17.97■□□□□ 0.47
HDAC8-207ENST00000373573 MBD5Q9P267 1494 aa17.96■□□□□ 0.47
HDAC8-207ENST00000373573 ZNF644Q9H582 1327 aaPredicted RBP17.95■□□□□ 0.46
HDAC8-207ENST00000373573 PLEKHD1A6NEE1 506 aa17.94■□□□□ 0.46
HDAC8-207ENST00000373573 ADGBQ8N7X0 1667 aa17.94■□□□□ 0.46
HDAC8-207ENST00000373573 ITSN2Q9NZM3 1697 aa17.94■□□□□ 0.46
HDAC8-207ENST00000373573 DHX29Q7Z478 1369 aaKnown RBP17.92■□□□□ 0.46
HDAC8-207ENST00000373573 SMG6Q86US8 1419 aaKnown RBP17.91■□□□□ 0.46
HDAC8-207ENST00000373573 B4GALNT3Q6L9W6 998 aa17.91■□□□□ 0.46
HDAC8-207ENST00000373573 ERICH6Q7L0X2 663 aa17.91■□□□□ 0.46
HDAC8-207ENST00000373573 ABCC10Q5T3U5 1492 aa17.91■□□□□ 0.46
HDAC8-207ENST00000373573 CAMSAP2Q08AD1 1489 aa17.9■□□□□ 0.46
HDAC8-207ENST00000373573 CDC42BPAQ5VT25 1732 aa17.9■□□□□ 0.46
HDAC8-207ENST00000373573 BCORL1Q5H9F3 1711 aa17.89■□□□□ 0.46
HDAC8-207ENST00000373573 KIAA1107Q9UPP5 1409 aa17.89■□□□□ 0.45
HDAC8-207ENST00000373573 ADGRL2O95490 1459 aa17.89■□□□□ 0.45
HDAC8-207ENST00000373573 CROCC2H7BZ55 1655 aa17.88■□□□□ 0.45
HDAC8-207ENST00000373573 CFDP1Q9UEE9 299 aaPredicted RBP17.88■□□□□ 0.45
HDAC8-207ENST00000373573 ARID4BQ4LE39 1312 aaPredicted RBP17.87■□□□□ 0.45
HDAC8-207ENST00000373573 USP47Q96K76 1375 aa17.87■□□□□ 0.45
HDAC8-207ENST00000373573 KDM5CP41229 1560 aa17.87■□□□□ 0.45
HDAC8-207ENST00000373573 TTC37Q6PGP7 1564 aa17.86■□□□□ 0.45
HDAC8-207ENST00000373573 GPATCH8Q9UKJ3 1502 aaKnown RBP17.86■□□□□ 0.45
HDAC8-207ENST00000373573 WDR7Q9Y4E6 1490 aa17.85■□□□□ 0.45
HDAC8-207ENST00000373573 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.85■□□□□ 0.45
HDAC8-207ENST00000373573 TRHP20396 242 aaPredicted RBP17.84■□□□□ 0.45
HDAC8-207ENST00000373573 RNF123Q5XPI4 1314 aa17.84■□□□□ 0.45
HDAC8-207ENST00000373573 PREX2Q70Z35 1606 aa17.84■□□□□ 0.45
HDAC8-207ENST00000373573 NUDCQ9Y266 331 aa17.84■□□□□ 0.45
HDAC8-207ENST00000373573 MYO5CQ9NQX4 1742 aa17.82■□□□□ 0.44
HDAC8-207ENST00000373573 UHRF1BP1Q6BDS2 1440 aa17.82■□□□□ 0.44
HDAC8-207ENST00000373573 ASXL2Q76L83 1435 aa17.82■□□□□ 0.44
HDAC8-207ENST00000373573 CDC42BPBQ9Y5S2 1711 aa17.81■□□□□ 0.44
HDAC8-207ENST00000373573 ROCK2O75116 1388 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms