RNA–Protein interactions for RNA: ENST00000373489.9

PBX3-204, Transcript of PBX homeobox 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PBX3, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-204ENST00000373489 MRS2Q9HD23 443 aa21.87■■□□□ 1.09
PBX3-204ENST00000373489 ZBTB47Q9UFB7 747 aaPredicted RBP21.87■■□□□ 1.09
PBX3-204ENST00000373489 CEP170Q5SW79 1584 aa21.86■■□□□ 1.09
PBX3-204ENST00000373489 IPO9Q96P70 1041 aaKnown RBP21.86■■□□□ 1.09
PBX3-204ENST00000373489 UGGT2Q9NYU1 1516 aa21.83■■□□□ 1.09
PBX3-204ENST00000373489 PTPRKQ15262 1439 aa21.83■■□□□ 1.09
PBX3-204ENST00000373489 SENP3-EIF4A1A0A087X0R7 540 aa21.82■■□□□ 1.08
PBX3-204ENST00000373489 CNGB1Q14028 1251 aaPredicted RBP21.82■■□□□ 1.08
PBX3-204ENST00000373489 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.82■■□□□ 1.08
PBX3-204ENST00000373489 NCOA2Q15596 1464 aa21.82■■□□□ 1.08
PBX3-204ENST00000373489 NUP160Q12769 1436 aa21.8■■□□□ 1.08
PBX3-204ENST00000373489 MYOM3Q5VTT5 1437 aa21.79■■□□□ 1.08
PBX3-204ENST00000373489 ZBED9Q6R2W3 1325 aa21.78■■□□□ 1.08
PBX3-204ENST00000373489 CCDC18Q5T9S5 1454 aa21.78■■□□□ 1.08
PBX3-204ENST00000373489 PRKRIP1Q9H875 184 aaPredicted RBP21.77■■□□□ 1.08
PBX3-204ENST00000373489 SUPT6HQ7KZ85 1726 aaKnown RBP21.77■■□□□ 1.08
PBX3-204ENST00000373489 HFM1A2PYH4 1435 aa21.77■■□□□ 1.08
PBX3-204ENST00000373489 NPM2Q86SE8 214 aaKnown RBP21.76■■□□□ 1.07
PBX3-204ENST00000373489 JPH4Q96JJ6 628 aa21.76■■□□□ 1.07
PBX3-204ENST00000373489 DISP1Q96F81 1524 aa21.76■■□□□ 1.07
PBX3-204ENST00000373489 EHBP1L1Q8N3D4 1523 aa21.76■■□□□ 1.07
PBX3-204ENST00000373489 C11orf95C9JLR9 678 aaPredicted RBP21.75■■□□□ 1.07
PBX3-204ENST00000373489 AKNAQ7Z591 1439 aa21.74■■□□□ 1.07
PBX3-204ENST00000373489 PTPN23Q9H3S7 1636 aa21.74■■□□□ 1.07
PBX3-204ENST00000373489 MAGI3Q5TCQ9 1506 aa21.74■■□□□ 1.07
PBX3-204ENST00000373489 KIAA0556O60303 1618 aa21.74■■□□□ 1.07
PBX3-204ENST00000373489 EIF4G2P78344 907 aaKnown RBP eCLIP21.73■■□□□ 1.07
PBX3-204ENST00000373489 LAS1LQ9Y4W2 734 aaKnown RBP21.72■■□□□ 1.07
PBX3-204ENST00000373489 NAIPQ13075 1403 aa21.71■■□□□ 1.07
PBX3-204ENST00000373489 UACAQ9BZF9 1416 aa21.71■■□□□ 1.07
PBX3-204ENST00000373489 CHD1O14646 1710 aa21.7■■□□□ 1.06
PBX3-204ENST00000373489 ARHGEF11O15085 1522 aa21.7■■□□□ 1.06
PBX3-204ENST00000373489 ARID3CA6NKF2 412 aa21.69■■□□□ 1.06
PBX3-204ENST00000373489 CNTLNQ9NXG0 1405 aa21.69■■□□□ 1.06
PBX3-204ENST00000373489 CARMIL2Q6F5E8 1435 aa21.68■■□□□ 1.06
PBX3-204ENST00000373489 HECW1Q76N89 1606 aa21.66■■□□□ 1.06
PBX3-204ENST00000373489 NEFMP07197 916 aa21.65■■□□□ 1.06
PBX3-204ENST00000373489 EPRSP07814 1512 aaKnown RBP21.63■■□□□ 1.05
PBX3-204ENST00000373489 KDM5BQ9UGL1 1544 aa21.63■■□□□ 1.05
PBX3-204ENST00000373489 TCOF1Q13428 1488 aaKnown RBP21.61■■□□□ 1.05
PBX3-204ENST00000373489 RRP7BPQ9NSQ0 103 aa21.6■■□□□ 1.05
PBX3-204ENST00000373489 CDK13Q14004 1512 aaKnown RBP21.6■■□□□ 1.05
PBX3-204ENST00000373489 CHIC2Q9UKJ5 165 aa21.6■■□□□ 1.05
PBX3-204ENST00000373489 CCDC7Q96M83 1385 aa21.59■■□□□ 1.05
PBX3-204ENST00000373489 PRG4Q92954 1404 aaPredicted RBP21.59■■□□□ 1.05
PBX3-204ENST00000373489 NUDCQ9Y266 331 aa21.59■■□□□ 1.05
PBX3-204ENST00000373489 L3MBTL2Q969R5 705 aa21.56■■□□□ 1.04
PBX3-204ENST00000373489 POLR3GLQ9BT43 218 aa21.56■■□□□ 1.04
PBX3-204ENST00000373489 FOXD1Q16676 465 aa21.55■■□□□ 1.04
PBX3-204ENST00000373489 RAPGEF6Q8TEU7 1601 aa21.55■■□□□ 1.04
PBX3-204ENST00000373489 PLB1Q6P1J6 1458 aa21.55■■□□□ 1.04
PBX3-204ENST00000373489 SMG6Q86US8 1419 aaKnown RBP21.55■■□□□ 1.04
PBX3-204ENST00000373489 GCC2Q8IWJ2 1684 aa21.53■■□□□ 1.04
PBX3-204ENST00000373489 NUP153P49790 1475 aaKnown RBP21.53■■□□□ 1.04
PBX3-204ENST00000373489 MIA2Q96PC5 1412 aa21.52■■□□□ 1.04
PBX3-204ENST00000373489 BRPF3Q9ULD4 1205 aa21.52■■□□□ 1.03
PBX3-204ENST00000373489 NCOA1Q15788 1441 aa21.5■■□□□ 1.03
PBX3-204ENST00000373489 KDM6BO15054 1643 aa21.5■■□□□ 1.03
PBX3-204ENST00000373489 DENND4BO75064 1496 aaPredicted RBP21.5■■□□□ 1.03
PBX3-204ENST00000373489 KIF7Q2M1P5 1343 aa21.5■■□□□ 1.03
PBX3-204ENST00000373489 EIF5BO60841 1220 aaKnown RBP21.49■■□□□ 1.03
PBX3-204ENST00000373489 RNF123Q5XPI4 1314 aa21.49■■□□□ 1.03
PBX3-204ENST00000373489 PTPRGP23470 1445 aa21.48■■□□□ 1.03
PBX3-204ENST00000373489 PDE4AP27815 886 aa21.47■■□□□ 1.03
PBX3-204ENST00000373489 NBPF8Q3BBV2 869 aa21.47■■□□□ 1.03
PBX3-204ENST00000373489 SHROOM2Q13796 1616 aa21.45■■□□□ 1.02
PBX3-204ENST00000373489 EXOC6Q8TAG9 804 aa21.44■■□□□ 1.02
PBX3-204ENST00000373489 USP35Q9P2H5 1018 aa21.44■■□□□ 1.02
PBX3-204ENST00000373489 WASHC2CQ9Y4E1 1318 aa21.42■■□□□ 1.02
PBX3-204ENST00000373489 MPHOSPH9Q99550 1183 aa21.42■■□□□ 1.02
PBX3-204ENST00000373489 CLASP1Q7Z460 1538 aa21.42■■□□□ 1.02
PBX3-204ENST00000373489 UBE2Q2Q8WVN8 375 aa21.41■■□□□ 1.02
PBX3-204ENST00000373489 ERCC6L2Q5T890 1561 aa21.4■■□□□ 1.02
PBX3-204ENST00000373489 ABCA8O94911 1581 aa21.4■■□□□ 1.02
PBX3-204ENST00000373489 PPM1GO15355 546 aaPredicted RBP21.39■■□□□ 1.02
PBX3-204ENST00000373489 DAPK1P53355 1430 aa21.39■■□□□ 1.01
PBX3-204ENST00000373489 TCERG1O14776 1098 aaKnown RBP21.38■■□□□ 1.01
PBX3-204ENST00000373489 SKAP1Q86WV1 359 aa21.38■■□□□ 1.01
PBX3-204ENST00000373489 BACH2Q9BYV9 841 aa21.38■■□□□ 1.01
PBX3-204ENST00000373489 ZNF644Q9H582 1327 aaPredicted RBP21.38■■□□□ 1.01
PBX3-204ENST00000373489 ABCC5O15440 1437 aa21.36■■□□□ 1.01
PBX3-204ENST00000373489 SLC4A3P48751 1232 aa21.36■■□□□ 1.01
PBX3-204ENST00000373489 ROCK1Q13464 1354 aa21.35■■□□□ 1.01
PBX3-204ENST00000373489 GSE1Q14687 1217 aa21.35■■□□□ 1.01
PBX3-204ENST00000373489 TMC1Q8TDI8 760 aa21.35■■□□□ 1.01
PBX3-204ENST00000373489 DNMT1P26358 1616 aaKnown RBP21.34■■□□□ 1.01
PBX3-204ENST00000373489 ATP10BO94823 1461 aa21.33■■□□□ 1.01
PBX3-204ENST00000373489 PLEKHD1A6NEE1 506 aa21.33■■□□□ 1
PBX3-204ENST00000373489 RRP1P56182 461 aaKnown RBP21.33■■□□□ 1
PBX3-204ENST00000373489 TROQ12816 1431 aaPredicted RBP21.32■■□□□ 1
PBX3-204ENST00000373489 PNISRQ8TF01 805 aaKnown RBP21.31■■□□□ 1
PBX3-204ENST00000373489 ZNF326Q5BKZ1 582 aaKnown RBP21.31■■□□□ 1
PBX3-204ENST00000373489 OSCARQ8IYS5 282 aa21.31■■□□□ 1
PBX3-204ENST00000373489 FRAT1Q92837 279 aaPredicted RBP21.3■■□□□ 1
PBX3-204ENST00000373489 NFKBIBQ15653 356 aa21.29■■□□□ 1
PBX3-204ENST00000373489 DHX29Q7Z478 1369 aaKnown RBP21.29■■□□□ 1
PBX3-204ENST00000373489 ANKRD30BQ9BXX2 1392 aa21.28■■□□□ 1
PBX3-204ENST00000373489 RCAN3Q9UKA8 241 aa21.26■□□□□ 0.99
PBX3-204ENST00000373489 SPATA31E1Q6ZUB1 1445 aa21.25■□□□□ 0.99
PBX3-204ENST00000373489 RPRD2Q5VT52 1461 aaKnown RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms