RNA–Protein interactions for RNA: ENST00000373344.9

ATRX-201, Transcript of ATRX, chromatin remodeler, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATRX, Length 11,220 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-201ENST00000373344 ANP32BQ92688 251 aaKnown RBP6.84□□□□□ -1.31
ATRX-201ENST00000373344 NUP155O75694 1391 aa6.83□□□□□ -1.32
ATRX-201ENST00000373344 MEX3CQ5U5Q3 659 aaKnown RBP6.83□□□□□ -1.32
ATRX-201ENST00000373344 TMX4Q9H1E5 349 aaPredicted RBP6.83□□□□□ -1.32
ATRX-201ENST00000373344 MORC1Q86VD1 984 aa6.83□□□□□ -1.32
ATRX-201ENST00000373344 TPRNQ4KMQ1 711 aa6.82□□□□□ -1.32
ATRX-201ENST00000373344 ARHGAP35Q9NRY4 1499 aa6.82□□□□□ -1.32
ATRX-201ENST00000373344 CDK11BP21127 795 aaKnown RBP6.82□□□□□ -1.32
ATRX-201ENST00000373344 LTV1Q96GA3 475 aaPredicted RBP6.82□□□□□ -1.32
ATRX-201ENST00000373344 ATAD2BQ9ULI0 1458 aa6.82□□□□□ -1.32
ATRX-201ENST00000373344 KANK4Q5T7N3 995 aaPredicted RBP6.82□□□□□ -1.32
ATRX-201ENST00000373344 MIER1Q8N108 512 aa6.81□□□□□ -1.32
ATRX-201ENST00000373344 FMN1Q68DA7 1419 aa6.81□□□□□ -1.32
ATRX-201ENST00000373344 TRAK1Q9UPV9 953 aa6.8□□□□□ -1.32
ATRX-201ENST00000373344 MSH5O43196 834 aa6.8□□□□□ -1.32
ATRX-201ENST00000373344 MPHOSPH9Q99550 1183 aa6.8□□□□□ -1.32
ATRX-201ENST00000373344 AMPHP49418 695 aa6.8□□□□□ -1.32
ATRX-201ENST00000373344 PTPRGP23470 1445 aa6.8□□□□□ -1.32
ATRX-201ENST00000373344 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.8□□□□□ -1.322e-9■■□□□ 12.5
ATRX-201ENST00000373344 ISY1Q9ULR0 285 aaKnown RBP6.8□□□□□ -1.32
ATRX-201ENST00000373344 G3V3G9 751 aa6.8□□□□□ -1.32
ATRX-201ENST00000373344 DCAF8Q5TAQ9 597 aa6.8□□□□□ -1.32
ATRX-201ENST00000373344 NAP1L2Q9ULW6 460 aaPredicted RBP6.79□□□□□ -1.32
ATRX-201ENST00000373344 ROCK2O75116 1388 aaKnown RBP6.79□□□□□ -1.32
ATRX-201ENST00000373344 ANKRD30AQ9BXX3 1397 aa6.79□□□□□ -1.32
ATRX-201ENST00000373344 CASC1Q6TDU7 716 aa6.79□□□□□ -1.32
ATRX-201ENST00000373344 PRDM2Q13029 1718 aa6.78□□□□□ -1.32
ATRX-201ENST00000373344 FHOD3Q2V2M9 1422 aa6.78□□□□□ -1.32
ATRX-201ENST00000373344 RSPH4AQ5TD94 716 aa6.78□□□□□ -1.32
ATRX-201ENST00000373344 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.78□□□□□ -1.32
ATRX-201ENST00000373344 SMARCA4P51532 1647 aa6.77□□□□□ -1.33
ATRX-201ENST00000373344 RAPGEF2Q9Y4G8 1499 aa6.77□□□□□ -1.33
ATRX-201ENST00000373344 CHMP3Q9Y3E7 222 aa6.77□□□□□ -1.33
ATRX-201ENST00000373344 TOP2AP11388 1531 aaKnown RBP6.77□□□□□ -1.33
ATRX-201ENST00000373344 KCNJ4P48050 445 aa6.77□□□□□ -1.33
ATRX-201ENST00000373344 FGD1P98174 961 aa6.77□□□□□ -1.33
ATRX-201ENST00000373344 SYTL4Q96C24 671 aaPredicted RBP6.77□□□□□ -1.33
ATRX-201ENST00000373344 GTF2E1P29083 439 aaPredicted RBP6.77□□□□□ -1.33
ATRX-201ENST00000373344 U2AF1L5P0DN76 240 aaPredicted RBP6.77□□□□□ -1.33
ATRX-201ENST00000373344 U2AF1Q01081 240 aaKnown RBP eCLIP6.77□□□□□ -1.33
ATRX-201ENST00000373344 CCDC18Q5T9S5 1454 aa6.76□□□□□ -1.33
ATRX-201ENST00000373344 PSME1Q06323 249 aa6.76□□□□□ -1.33
ATRX-201ENST00000373344 SUPT16HQ9Y5B9 1047 aaKnown RBP6.76□□□□□ -1.33
ATRX-201ENST00000373344 NCBP3Q53F19 620 aaKnown RBP6.75□□□□□ -1.33
ATRX-201ENST00000373344 KLHL34Q8N239 644 aa6.75□□□□□ -1.33
ATRX-201ENST00000373344 APBB1O00213 710 aa6.75□□□□□ -1.33
ATRX-201ENST00000373344 TERF2IPQ9NYB0 399 aa6.75□□□□□ -1.33
ATRX-201ENST00000373344 TAF7LQ5H9L4 462 aa6.74□□□□□ -1.33
ATRX-201ENST00000373344 AQRO60306 1485 aaKnown RBP eCLIP6.74□□□□□ -1.334e-6■□□□□ 10.6
ATRX-201ENST00000373344 ATF3P18847 181 aa6.74□□□□□ -1.33
ATRX-201ENST00000373344 GAPVD1Q14C86 1478 aa6.74□□□□□ -1.33
ATRX-201ENST00000373344 SETD5Q9C0A6 1442 aa6.74□□□□□ -1.33
ATRX-201ENST00000373344 NBR1Q14596 966 aa6.73□□□□□ -1.33
ATRX-201ENST00000373344 RAD54L2Q9Y4B4 1467 aa6.73□□□□□ -1.33
ATRX-201ENST00000373344 ZRSR1Q15695 479 aaKnown RBP6.73□□□□□ -1.33
ATRX-201ENST00000373344 VGFO15240 615 aaPredicted RBP6.73□□□□□ -1.33
ATRX-201ENST00000373344 FRAT2O75474 233 aaPredicted RBP6.73□□□□□ -1.33
ATRX-201ENST00000373344 NCLP19338 710 aaKnown RBP6.73□□□□□ -1.33
ATRX-201ENST00000373344 RGS3P49796 1198 aa6.72□□□□□ -1.33
ATRX-201ENST00000373344 PIP4K2BP78356 416 aa6.72□□□□□ -1.33
ATRX-201ENST00000373344 NGEFQ8N5V2 710 aa6.72□□□□□ -1.33
ATRX-201ENST00000373344 HSPA5P11021 654 aaKnown RBP6.72□□□□□ -1.33
ATRX-201ENST00000373344 VPS8Q8N3P4 1428 aa6.71□□□□□ -1.33
ATRX-201ENST00000373344 GORABQ5T7V8 394 aa6.71□□□□□ -1.33
ATRX-201ENST00000373344 SLC4A10Q6U841 1118 aa6.71□□□□□ -1.33
ATRX-201ENST00000373344 CHMP4BQ9H444 224 aaKnown RBP6.71□□□□□ -1.33
ATRX-201ENST00000373344 CC2D2AQ9P2K1 1620 aa6.71□□□□□ -1.34
ATRX-201ENST00000373344 MINK1Q8N4C8 1332 aaPredicted RBP6.71□□□□□ -1.34
ATRX-201ENST00000373344 FGD5Q6ZNL6 1462 aa6.71□□□□□ -1.34
ATRX-201ENST00000373344 USP35Q9P2H5 1018 aa6.7□□□□□ -1.34
ATRX-201ENST00000373344 MS4A1P11836 297 aa6.7□□□□□ -1.34
ATRX-201ENST00000373344 CLSTN1O94985 981 aa6.7□□□□□ -1.34
ATRX-201ENST00000373344 C1orf141Q5JVX7 400 aa6.7□□□□□ -1.34
ATRX-201ENST00000373344 NESP48681 1621 aa6.7□□□□□ -1.34
ATRX-201ENST00000373344 EIF3AQ14152 1382 aaKnown RBP6.7□□□□□ -1.34
ATRX-201ENST00000373344 RAB3GAP2Q9H2M9 1393 aa6.7□□□□□ -1.34
ATRX-201ENST00000373344 RUSC2Q8N2Y8 1516 aa6.69□□□□□ -1.34
ATRX-201ENST00000373344 BECN1Q14457 450 aa6.69□□□□□ -1.34
ATRX-201ENST00000373344 AFAP1Q8N556 730 aa6.69□□□□□ -1.34
ATRX-201ENST00000373344 L3MBTL2Q969R5 705 aa6.69□□□□□ -1.34
ATRX-201ENST00000373344 NUTM2BA6NNL0 878 aaPredicted RBP6.68□□□□□ -1.34
ATRX-201ENST00000373344 NUTM2EB1AL46 878 aaPredicted RBP6.68□□□□□ -1.34
ATRX-201ENST00000373344 NUTM2AQ8IVF1 878 aaPredicted RBP6.68□□□□□ -1.34
ATRX-201ENST00000373344 STK31Q9BXU1 1019 aa6.68□□□□□ -1.34
ATRX-201ENST00000373344 CCDC144AA2RUR9 1427 aa6.68□□□□□ -1.34
ATRX-201ENST00000373344 DCAF8L1A6NGE4 600 aa6.68□□□□□ -1.34
ATRX-201ENST00000373344 B4GALNT3Q6L9W6 998 aa6.68□□□□□ -1.34
ATRX-201ENST00000373344 CCDC146Q8IYE0 955 aa6.68□□□□□ -1.34
ATRX-201ENST00000373344 COG3Q96JB2 828 aa6.68□□□□□ -1.34
ATRX-201ENST00000373344 PPP1R1BQ9UD71 204 aaPredicted RBP6.68□□□□□ -1.34
ATRX-201ENST00000373344 DNAJC5BQ9UF47 199 aa6.68□□□□□ -1.34
ATRX-201ENST00000373344 NUTM2GQ5VZR2 741 aa6.68□□□□□ -1.34
ATRX-201ENST00000373344 KTN1Q86UP2 1357 aaKnown RBP6.68□□□□□ -1.34
ATRX-201ENST00000373344 CALD1Q05682 793 aaKnown RBP6.68□□□□□ -1.34
ATRX-201ENST00000373344 PLCB2Q00722 1185 aa6.67□□□□□ -1.34
ATRX-201ENST00000373344 ELL2O00472 640 aaPredicted RBP6.67□□□□□ -1.34
ATRX-201ENST00000373344 AMER1Q5JTC6 1135 aaPredicted RBP6.67□□□□□ -1.34
ATRX-201ENST00000373344 TEFQ10587 303 aa6.67□□□□□ -1.34
ATRX-201ENST00000373344 ESCO1Q5FWF5 840 aa6.67□□□□□ -1.34
ATRX-201ENST00000373344 TXNDC2Q86VQ3 553 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms