RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 ANP32EQ9BTT0 268 aa23.66■■□□□ 1.38
TRAF3IP1-201ENST00000373327 TNNT2P45379 298 aaPredicted RBP23.65■■□□□ 1.38
TRAF3IP1-201ENST00000373327 PLPPR3Q6T4P5 718 aa23.65■■□□□ 1.38
TRAF3IP1-201ENST00000373327 CARMIL2Q6F5E8 1435 aa23.63■■□□□ 1.37
TRAF3IP1-201ENST00000373327 PRDM2Q13029 1718 aa23.62■■□□□ 1.37
TRAF3IP1-201ENST00000373327 ANKRD30AQ9BXX3 1397 aa23.62■■□□□ 1.37
TRAF3IP1-201ENST00000373327 DNMBPQ6XZF7 1577 aa23.62■■□□□ 1.37
TRAF3IP1-201ENST00000373327 CDK13Q14004 1512 aaKnown RBP23.62■■□□□ 1.37
TRAF3IP1-201ENST00000373327 NPM1P06748 294 aaKnown RBP eCLIP23.61■■□□□ 1.37
TRAF3IP1-201ENST00000373327 ABCA10Q8WWZ4 1543 aa23.6■■□□□ 1.37
TRAF3IP1-201ENST00000373327 NEUROD2Q15784 382 aa23.6■■□□□ 1.37
TRAF3IP1-201ENST00000373327 NAIPQ13075 1403 aa23.57■■□□□ 1.36
TRAF3IP1-201ENST00000373327 C11orf95C9JLR9 678 aaPredicted RBP23.57■■□□□ 1.36
TRAF3IP1-201ENST00000373327 URB2Q14146 1524 aaKnown RBP23.57■■□□□ 1.36
TRAF3IP1-201ENST00000373327 KIF7Q2M1P5 1343 aa23.57■■□□□ 1.36
TRAF3IP1-201ENST00000373327 PTPRKQ15262 1439 aa23.56■■□□□ 1.36
TRAF3IP1-201ENST00000373327 ROCK2O75116 1388 aaKnown RBP23.55■■□□□ 1.36
TRAF3IP1-201ENST00000373327 KNSTRNQ9Y448 316 aa23.55■■□□□ 1.36
TRAF3IP1-201ENST00000373327 PRG4Q92954 1404 aaPredicted RBP23.54■■□□□ 1.36
TRAF3IP1-201ENST00000373327 HFM1A2PYH4 1435 aa23.54■■□□□ 1.36
TRAF3IP1-201ENST00000373327 MAPKBP1O60336 1514 aa23.53■■□□□ 1.36
TRAF3IP1-201ENST00000373327 USP47Q96K76 1375 aa23.51■■□□□ 1.35
TRAF3IP1-201ENST00000373327 EFCAB5A4FU69 1503 aa23.49■■□□□ 1.35
TRAF3IP1-201ENST00000373327 CCDC7Q96M83 1385 aa23.49■■□□□ 1.35
TRAF3IP1-201ENST00000373327 STAG3Q9UJ98 1225 aa23.48■■□□□ 1.35
TRAF3IP1-201ENST00000373327 SAFB2Q14151 953 aaKnown RBP eCLIP23.47■■□□□ 1.35
TRAF3IP1-201ENST00000373327 ZBTB47Q9UFB7 747 aaPredicted RBP23.47■■□□□ 1.35
TRAF3IP1-201ENST00000373327 GRIN2BQ13224 1484 aa23.45■■□□□ 1.34
TRAF3IP1-201ENST00000373327 NUTM2DQ5VT03 806 aaPredicted RBP23.43■■□□□ 1.34
TRAF3IP1-201ENST00000373327 GGT6Q6P531 493 aa23.43■■□□□ 1.34
TRAF3IP1-201ENST00000373327 TMF1P82094 1093 aa23.42■■□□□ 1.34
TRAF3IP1-201ENST00000373327 PTPRGP23470 1445 aa23.42■■□□□ 1.34
TRAF3IP1-201ENST00000373327 ZNF608Q9ULD9 1512 aaPredicted RBP23.41■■□□□ 1.34
TRAF3IP1-201ENST00000373327 EPRSP07814 1512 aaKnown RBP23.4■■□□□ 1.34
TRAF3IP1-201ENST00000373327 KIF3BO15066 747 aa23.39■■□□□ 1.33
TRAF3IP1-201ENST00000373327 SNAPC4Q5SXM2 1469 aa23.38■■□□□ 1.33
TRAF3IP1-201ENST00000373327 PLIN1O60240 522 aa23.37■■□□□ 1.33
TRAF3IP1-201ENST00000373327 RGS3P49796 1198 aa23.37■■□□□ 1.33
TRAF3IP1-201ENST00000373327 NBPF1Q3BBV0 1214 aa23.36■■□□□ 1.33
TRAF3IP1-201ENST00000373327 NUDCQ9Y266 331 aa23.36■■□□□ 1.33
TRAF3IP1-201ENST00000373327 ANKRD50Q9ULJ7 1429 aa23.35■■□□□ 1.33
TRAF3IP1-201ENST00000373327 EFCAB2Q5VUJ9 269 aa23.35■■□□□ 1.33
TRAF3IP1-201ENST00000373327 PANK3Q9H999 370 aa23.35■■□□□ 1.33
TRAF3IP1-201ENST00000373327 EHBP1L1Q8N3D4 1523 aa23.35■■□□□ 1.33
TRAF3IP1-201ENST00000373327 KIF15Q9NS87 1388 aa23.34■■□□□ 1.33
TRAF3IP1-201ENST00000373327 SLC24A1O60721 1099 aa23.34■■□□□ 1.33
TRAF3IP1-201ENST00000373327 LAS1LQ9Y4W2 734 aaKnown RBP23.34■■□□□ 1.33
TRAF3IP1-201ENST00000373327 CNTLNQ9NXG0 1405 aa23.34■■□□□ 1.33
TRAF3IP1-201ENST00000373327 CCDC146Q8IYE0 955 aa23.33■■□□□ 1.33
TRAF3IP1-201ENST00000373327 KTN1Q86UP2 1357 aaKnown RBP23.33■■□□□ 1.33
TRAF3IP1-201ENST00000373327 RCAN3Q9UKA8 241 aa23.32■■□□□ 1.32
TRAF3IP1-201ENST00000373327 PLB1Q6P1J6 1458 aa23.32■■□□□ 1.32
TRAF3IP1-201ENST00000373327 PPM1GO15355 546 aaPredicted RBP23.32■■□□□ 1.32
TRAF3IP1-201ENST00000373327 SUPT6HQ7KZ85 1726 aaKnown RBP23.31■■□□□ 1.32
TRAF3IP1-201ENST00000373327 MAP3K1Q13233 1512 aa23.31■■□□□ 1.32
TRAF3IP1-201ENST00000373327 MRC2Q9UBG0 1479 aa23.31■■□□□ 1.32
TRAF3IP1-201ENST00000373327 FRAT1Q92837 279 aaPredicted RBP23.3■■□□□ 1.32
TRAF3IP1-201ENST00000373327 DAPK1P53355 1430 aa23.3■■□□□ 1.32
TRAF3IP1-201ENST00000373327 ZBED9Q6R2W3 1325 aa23.29■■□□□ 1.32
TRAF3IP1-201ENST00000373327 CCDC144AA2RUR9 1427 aa23.29■■□□□ 1.32
TRAF3IP1-201ENST00000373327 PTPN23Q9H3S7 1636 aa23.29■■□□□ 1.32
TRAF3IP1-201ENST00000373327 SPAG9O60271 1321 aaKnown RBP23.27■■□□□ 1.32
TRAF3IP1-201ENST00000373327 STK26Q9P289 416 aa23.27■■□□□ 1.32
TRAF3IP1-201ENST00000373327 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.27■■□□□ 1.32
TRAF3IP1-201ENST00000373327 AFAP1Q8N556 730 aa23.26■■□□□ 1.31
TRAF3IP1-201ENST00000373327 IQGAP2Q13576 1575 aa23.25■■□□□ 1.31
TRAF3IP1-201ENST00000373327 NLRP13Q86W25 1043 aa23.25■■□□□ 1.31
TRAF3IP1-201ENST00000373327 CUL7Q14999 1698 aa23.25■■□□□ 1.31
TRAF3IP1-201ENST00000373327 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.25■■□□□ 1.31
TRAF3IP1-201ENST00000373327 LAMC3Q9Y6N6 1575 aa23.24■■□□□ 1.31
TRAF3IP1-201ENST00000373327 RALBP1Q15311 655 aa23.24■■□□□ 1.31
TRAF3IP1-201ENST00000373327 EXOC6Q8TAG9 804 aa23.24■■□□□ 1.31
TRAF3IP1-201ENST00000373327 ARXQ96QS3 562 aa23.24■■□□□ 1.31
TRAF3IP1-201ENST00000373327 THOC2Q8NI27 1593 aaKnown RBP23.23■■□□□ 1.31
TRAF3IP1-201ENST00000373327 PLEKHG5O94827 1062 aa23.23■■□□□ 1.31
TRAF3IP1-201ENST00000373327 ABCC5O15440 1437 aa23.22■■□□□ 1.31
TRAF3IP1-201ENST00000373327 CDCA8Q53HL2 280 aa23.22■■□□□ 1.31
TRAF3IP1-201ENST00000373327 NOP58Q9Y2X3 529 aaKnown RBP23.22■■□□□ 1.31
TRAF3IP1-201ENST00000373327 MIA2Q96PC5 1412 aa23.21■■□□□ 1.31
TRAF3IP1-201ENST00000373327 NEFMP07197 916 aa23.21■■□□□ 1.31
TRAF3IP1-201ENST00000373327 MLECQ14165 292 aa23.21■■□□□ 1.31
TRAF3IP1-201ENST00000373327 HECW1Q76N89 1606 aa23.2■■□□□ 1.31
TRAF3IP1-201ENST00000373327 CDCA7LQ96GN5 454 aa23.2■■□□□ 1.31
TRAF3IP1-201ENST00000373327 TROQ12816 1431 aaPredicted RBP23.2■■□□□ 1.3
TRAF3IP1-201ENST00000373327 MYBBP1AQ9BQG0 1328 aaKnown RBP23.2■■□□□ 1.3
TRAF3IP1-201ENST00000373327 ANKRD30BQ9BXX2 1392 aa23.19■■□□□ 1.3
TRAF3IP1-201ENST00000373327 AKNAQ7Z591 1439 aa23.19■■□□□ 1.3
TRAF3IP1-201ENST00000373327 ESF1Q9H501 851 aaKnown RBP23.19■■□□□ 1.3
TRAF3IP1-201ENST00000373327 TRAK1Q9UPV9 953 aa23.18■■□□□ 1.3
TRAF3IP1-201ENST00000373327 U2SURPO15042 1029 aaKnown RBP23.17■■□□□ 1.3
TRAF3IP1-201ENST00000373327 IFT140Q96RY7 1462 aa23.16■■□□□ 1.3
TRAF3IP1-201ENST00000373327 ARHGEF11O15085 1522 aa23.14■■□□□ 1.3
TRAF3IP1-201ENST00000373327 KIAA0586Q9BVV6 1533 aa23.14■■□□□ 1.3
TRAF3IP1-201ENST00000373327 RRP7AQ9Y3A4 280 aaKnown RBP23.14■■□□□ 1.3
TRAF3IP1-201ENST00000373327 C9orf84Q5VXU9 1444 aa23.14■■□□□ 1.29
TRAF3IP1-201ENST00000373327 KIAA1107Q9UPP5 1409 aa23.13■■□□□ 1.29
TRAF3IP1-201ENST00000373327 RSPH4AQ5TD94 716 aa23.12■■□□□ 1.29
TRAF3IP1-201ENST00000373327 MORC1Q86VD1 984 aa23.12■■□□□ 1.29
TRAF3IP1-201ENST00000373327 KANK1Q14678 1352 aa23.11■■□□□ 1.29
TRAF3IP1-201ENST00000373327 SRPK2P78362 688 aaKnown RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms