RNA–Protein interactions for RNA: ENST00000373093.4

GRIK3-202, Transcript of glutamate ionotropic receptor kainate type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIK3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK3-202ENST00000373093 ERCC6Q03468 1493 aa15□□□□□ -0.01
GRIK3-202ENST00000373093 KDM2AQ9Y2K7 1162 aa15□□□□□ -0.01
GRIK3-202ENST00000373093 SALL2Q9Y467 1007 aaPredicted RBP15□□□□□ -0.01
GRIK3-202ENST00000373093 DEKP35659 375 aaKnown RBP14.99□□□□□ -0.01
GRIK3-202ENST00000373093 THOC2Q8NI27 1593 aaKnown RBP14.98□□□□□ -0.01
GRIK3-202ENST00000373093 FANCIQ9NVI1 1328 aa14.98□□□□□ -0.01
GRIK3-202ENST00000373093 EPRSP07814 1512 aaKnown RBP14.98□□□□□ -0.01
GRIK3-202ENST00000373093 SUPT6HQ7KZ85 1726 aaKnown RBP14.98□□□□□ -0.01
GRIK3-202ENST00000373093 UGGT2Q9NYU1 1516 aa14.97□□□□□ -0.01
GRIK3-202ENST00000373093 SAMD9Q5K651 1589 aa14.97□□□□□ -0.01
GRIK3-202ENST00000373093 ZNF608Q9ULD9 1512 aaPredicted RBP14.97□□□□□ -0.01
GRIK3-202ENST00000373093 KIF7Q2M1P5 1343 aa14.97□□□□□ -0.01
GRIK3-202ENST00000373093 PPP4R2Q9NY27 417 aa14.97□□□□□ -0.01
GRIK3-202ENST00000373093 ABCA5Q8WWZ7 1642 aa14.95□□□□□ -0.02
GRIK3-202ENST00000373093 EHBP1L1Q8N3D4 1523 aa14.95□□□□□ -0.02
GRIK3-202ENST00000373093 CCDC7Q96M83 1385 aa14.95□□□□□ -0.02
GRIK3-202ENST00000373093 CFDP1Q9UEE9 299 aaPredicted RBP14.94□□□□□ -0.02
GRIK3-202ENST00000373093 WDR62O43379 1518 aa14.94□□□□□ -0.02
GRIK3-202ENST00000373093 PRG4Q92954 1404 aaPredicted RBP14.93□□□□□ -0.02
GRIK3-202ENST00000373093 PKD2Q13563 968 aa14.92□□□□□ -0.02
GRIK3-202ENST00000373093 CNTLNQ9NXG0 1405 aa14.91□□□□□ -0.02
GRIK3-202ENST00000373093 ANKRD30BQ9BXX2 1392 aa14.9□□□□□ -0.02
GRIK3-202ENST00000373093 ABCC5O15440 1437 aa14.9□□□□□ -0.02
GRIK3-202ENST00000373093 TARBP1Q13395 1621 aaKnown RBP14.89□□□□□ -0.03
GRIK3-202ENST00000373093 NPM2Q86SE8 214 aaKnown RBP14.89□□□□□ -0.03
GRIK3-202ENST00000373093 CHMP7Q8WUX9 453 aaPredicted RBP14.88□□□□□ -0.03
GRIK3-202ENST00000373093 DAPK1P53355 1430 aa14.88□□□□□ -0.03
GRIK3-202ENST00000373093 AKNAQ7Z591 1439 aa14.88□□□□□ -0.03
GRIK3-202ENST00000373093 IQGAP2Q13576 1575 aa14.87□□□□□ -0.03
GRIK3-202ENST00000373093 IFT140Q96RY7 1462 aa14.86□□□□□ -0.03
GRIK3-202ENST00000373093 ARHGEF11O15085 1522 aa14.86□□□□□ -0.03
GRIK3-202ENST00000373093 RGL3Q3MIN7 710 aa14.86□□□□□ -0.03
GRIK3-202ENST00000373093 NOP58Q9Y2X3 529 aaKnown RBP14.86□□□□□ -0.03
GRIK3-202ENST00000373093 RTN4Q9NQC3 1192 aaKnown RBP14.85□□□□□ -0.03
GRIK3-202ENST00000373093 NCOA1Q15788 1441 aa14.84□□□□□ -0.03
GRIK3-202ENST00000373093 CCDC136Q96JN2 1154 aa14.84□□□□□ -0.03
GRIK3-202ENST00000373093 PLB1Q6P1J6 1458 aa14.84□□□□□ -0.03
GRIK3-202ENST00000373093 HNRNPMP52272 730 aaKnown RBP eCLIP14.84□□□□□ -0.03
GRIK3-202ENST00000373093 TCOF1Q13428 1488 aaKnown RBP14.83□□□□□ -0.03
GRIK3-202ENST00000373093 HECW1Q76N89 1606 aa14.83□□□□□ -0.04
GRIK3-202ENST00000373093 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.82□□□□□ -0.04
GRIK3-202ENST00000373093 NUP153P49790 1475 aaKnown RBP14.82□□□□□ -0.04
GRIK3-202ENST00000373093 DCAF11Q8TEB1 546 aa14.82□□□□□ -0.04
GRIK3-202ENST00000373093 CARD11Q9BXL7 1154 aa14.82□□□□□ -0.04
GRIK3-202ENST00000373093 ST20-MTHFSA0A0A6YYL1 179 aa14.8□□□□□ -0.04
GRIK3-202ENST00000373093 RPRD2Q5VT52 1461 aaKnown RBP14.8□□□□□ -0.04
GRIK3-202ENST00000373093 USP47Q96K76 1375 aa14.8□□□□□ -0.04
GRIK3-202ENST00000373093 MIA2Q96PC5 1412 aa14.79□□□□□ -0.04
GRIK3-202ENST00000373093 SKAP1Q86WV1 359 aa14.79□□□□□ -0.04
GRIK3-202ENST00000373093 TMC1Q8TDI8 760 aa14.79□□□□□ -0.04
GRIK3-202ENST00000373093 TEX14Q8IWB6 1497 aa14.79□□□□□ -0.04
GRIK3-202ENST00000373093 ZBED9Q6R2W3 1325 aa14.78□□□□□ -0.04
GRIK3-202ENST00000373093 DISP1Q96F81 1524 aa14.78□□□□□ -0.04
GRIK3-202ENST00000373093 NUP155O75694 1391 aa14.78□□□□□ -0.04
GRIK3-202ENST00000373093 LAS1LQ9Y4W2 734 aaKnown RBP14.77□□□□□ -0.04
GRIK3-202ENST00000373093 JPH4Q96JJ6 628 aa14.77□□□□□ -0.05
GRIK3-202ENST00000373093 PBRM1Q86U86 1689 aa14.77□□□□□ -0.05
GRIK3-202ENST00000373093 ADAMTS12P58397 1594 aa14.76□□□□□ -0.05
GRIK3-202ENST00000373093 GCC2Q8IWJ2 1684 aa14.76□□□□□ -0.05
GRIK3-202ENST00000373093 ANO8Q9HCE9 1232 aaPredicted RBP14.76□□□□□ -0.05
GRIK3-202ENST00000373093 SPATA31E1Q6ZUB1 1445 aa14.75□□□□□ -0.05
GRIK3-202ENST00000373093 PZPP20742 1482 aa14.75□□□□□ -0.05
GRIK3-202ENST00000373093 PLEKHD1A6NEE1 506 aa14.73□□□□□ -0.05
GRIK3-202ENST00000373093 ANP32AP39687 249 aaKnown RBP14.73□□□□□ -0.05
GRIK3-202ENST00000373093 DHX29Q7Z478 1369 aaKnown RBP14.73□□□□□ -0.05
GRIK3-202ENST00000373093 NBPF1Q3BBV0 1214 aa14.73□□□□□ -0.05
GRIK3-202ENST00000373093 IL27Q8NEV9 243 aa14.73□□□□□ -0.05
GRIK3-202ENST00000373093 CAMSAP2Q08AD1 1489 aa14.73□□□□□ -0.05
GRIK3-202ENST00000373093 ZBTB47Q9UFB7 747 aaPredicted RBP14.73□□□□□ -0.05
GRIK3-202ENST00000373093 CC2D1BQ5T0F9 858 aaKnown RBP14.72□□□□□ -0.05
GRIK3-202ENST00000373093 RTL5Q5HYW3 569 aaPredicted RBP14.71□□□□□ -0.05
GRIK3-202ENST00000373093 KIF14Q15058 1648 aa14.71□□□□□ -0.05
GRIK3-202ENST00000373093 TSPY4P0CV99 314 aa14.7□□□□□ -0.06
GRIK3-202ENST00000373093 TSPY10P0CW01 314 aa14.7□□□□□ -0.06
GRIK3-202ENST00000373093 GPATCH8Q9UKJ3 1502 aaKnown RBP14.7□□□□□ -0.06
GRIK3-202ENST00000373093 ROCK1Q13464 1354 aa14.7□□□□□ -0.06
GRIK3-202ENST00000373093 KIAA0586Q9BVV6 1533 aa14.69□□□□□ -0.06
GRIK3-202ENST00000373093 ERICH6BQ5W0A0 696 aa14.69□□□□□ -0.06
GRIK3-202ENST00000373093 PNISRQ8TF01 805 aaKnown RBP14.69□□□□□ -0.06
GRIK3-202ENST00000373093 IPO9Q96P70 1041 aaKnown RBP14.69□□□□□ -0.06
GRIK3-202ENST00000373093 ANKRD50Q9ULJ7 1429 aa14.69□□□□□ -0.06
GRIK3-202ENST00000373093 NUDCQ9Y266 331 aa14.69□□□□□ -0.06
GRIK3-202ENST00000373093 BCORL1Q5H9F3 1711 aa14.69□□□□□ -0.06
GRIK3-202ENST00000373093 KIAA0556O60303 1618 aa14.68□□□□□ -0.06
GRIK3-202ENST00000373093 PLIN1O60240 522 aa14.68□□□□□ -0.06
GRIK3-202ENST00000373093 CDCA7LQ96GN5 454 aa14.68□□□□□ -0.06
GRIK3-202ENST00000373093 EIF4G3O43432 1585 aaKnown RBP14.68□□□□□ -0.06
GRIK3-202ENST00000373093 TROQ12816 1431 aaPredicted RBP14.68□□□□□ -0.06
GRIK3-202ENST00000373093 EXOC6Q8TAG9 804 aa14.68□□□□□ -0.06
GRIK3-202ENST00000373093 GRIN2AQ12879 1464 aa14.68□□□□□ -0.06
GRIK3-202ENST00000373093 KIAA1107Q9UPP5 1409 aa14.68□□□□□ -0.06
GRIK3-202ENST00000373093 DNMT1P26358 1616 aaKnown RBP14.67□□□□□ -0.06
GRIK3-202ENST00000373093 ANKRD30AQ9BXX3 1397 aa14.66□□□□□ -0.06
GRIK3-202ENST00000373093 RAPGEF6Q8TEU7 1601 aa14.65□□□□□ -0.06
GRIK3-202ENST00000373093 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.64□□□□□ -0.07
GRIK3-202ENST00000373093 MAGI1Q96QZ7 1491 aaPredicted RBP14.63□□□□□ -0.07
GRIK3-202ENST00000373093 ROCK2O75116 1388 aaKnown RBP14.62□□□□□ -0.07
GRIK3-202ENST00000373093 SLC4A3P48751 1232 aa14.62□□□□□ -0.07
GRIK3-202ENST00000373093 NEFMP07197 916 aa14.61□□□□□ -0.07
GRIK3-202ENST00000373093 KIF15Q9NS87 1388 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms