RNA–Protein interactions for RNA: ENST00000373088.5

PCDH11X-204, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-204ENST00000373088 ANKRD30AQ9BXX3 1397 aa6.46□□□□□ -1.38
PCDH11X-204ENST00000373088 SUPT6HQ7KZ85 1726 aaKnown RBP6.46□□□□□ -1.38
PCDH11X-204ENST00000373088 RGL3Q3MIN7 710 aa6.45□□□□□ -1.38
PCDH11X-204ENST00000373088 PHF23Q9BUL5 403 aaPredicted RBP6.45□□□□□ -1.38
PCDH11X-204ENST00000373088 MIER1Q8N108 512 aa6.45□□□□□ -1.38
PCDH11X-204ENST00000373088 MAGI3Q5TCQ9 1506 aa6.45□□□□□ -1.38
PCDH11X-204ENST00000373088 MIA2Q96PC5 1412 aa6.45□□□□□ -1.38
PCDH11X-204ENST00000373088 CENPBP07199 599 aaPredicted RBP6.45□□□□□ -1.38
PCDH11X-204ENST00000373088 ARHGEF11O15085 1522 aa6.45□□□□□ -1.38
PCDH11X-204ENST00000373088 NUP155O75694 1391 aa6.45□□□□□ -1.38
PCDH11X-204ENST00000373088 RAPGEF6Q8TEU7 1601 aa6.45□□□□□ -1.38
PCDH11X-204ENST00000373088 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.44□□□□□ -1.38
PCDH11X-204ENST00000373088 NAIPQ13075 1403 aa6.44□□□□□ -1.38
PCDH11X-204ENST00000373088 PPP1R15AO75807 674 aaPredicted RBP6.44□□□□□ -1.38
PCDH11X-204ENST00000373088 AFAP1Q8N556 730 aa6.44□□□□□ -1.38
PCDH11X-204ENST00000373088 CFAP43Q8NDM7 1665 aa6.44□□□□□ -1.38
PCDH11X-204ENST00000373088 HFM1A2PYH4 1435 aa6.43□□□□□ -1.38
PCDH11X-204ENST00000373088 PTPN23Q9H3S7 1636 aa6.42□□□□□ -1.38
PCDH11X-204ENST00000373088 CHGAP10645 457 aaKnown RBP6.42□□□□□ -1.38
PCDH11X-204ENST00000373088 L3MBTL2Q969R5 705 aa6.42□□□□□ -1.38
PCDH11X-204ENST00000373088 ABCC5O15440 1437 aa6.42□□□□□ -1.38
PCDH11X-204ENST00000373088 DAPK1P53355 1430 aa6.42□□□□□ -1.38
PCDH11X-204ENST00000373088 SPAG9O60271 1321 aaKnown RBP6.42□□□□□ -1.38
PCDH11X-204ENST00000373088 RSPH4AQ5TD94 716 aa6.42□□□□□ -1.38
PCDH11X-204ENST00000373088 GPATCH8Q9UKJ3 1502 aaKnown RBP6.42□□□□□ -1.38
PCDH11X-204ENST00000373088 KIF15Q9NS87 1388 aa6.41□□□□□ -1.38
PCDH11X-204ENST00000373088 TIMELESSQ9UNS1 1208 aa6.41□□□□□ -1.38
PCDH11X-204ENST00000373088 ARHGAP5Q13017 1502 aa6.4□□□□□ -1.38
PCDH11X-204ENST00000373088 KIF3BO15066 747 aa6.4□□□□□ -1.38
PCDH11X-204ENST00000373088 ERCC6L2Q5T890 1561 aa6.4□□□□□ -1.38
PCDH11X-204ENST00000373088 ANKRD50Q9ULJ7 1429 aa6.4□□□□□ -1.38
PCDH11X-204ENST00000373088 CAMSAP2Q08AD1 1489 aa6.4□□□□□ -1.39
PCDH11X-204ENST00000373088 GGT6Q6P531 493 aa6.4□□□□□ -1.39
PCDH11X-204ENST00000373088 EIF4G2P78344 907 aaKnown RBP eCLIP6.4□□□□□ -1.39
PCDH11X-204ENST00000373088 CHD1O14646 1710 aa6.39□□□□□ -1.39
PCDH11X-204ENST00000373088 DCAF11Q8TEB1 546 aa6.39□□□□□ -1.39
PCDH11X-204ENST00000373088 ACIN1Q9UKV3 1341 aaKnown RBP6.39□□□□□ -1.39
PCDH11X-204ENST00000373088 C9orf84Q5VXU9 1444 aa6.39□□□□□ -1.39
PCDH11X-204ENST00000373088 ANP32CO43423 234 aa6.39□□□□□ -1.39
PCDH11X-204ENST00000373088 FAM69CQ0P6D2 419 aa6.38□□□□□ -1.39
PCDH11X-204ENST00000373088 PLPPR3Q6T4P5 718 aa6.38□□□□□ -1.39
PCDH11X-204ENST00000373088 NCOA1Q15788 1441 aa6.37□□□□□ -1.39
PCDH11X-204ENST00000373088 KIF14Q15058 1648 aa6.37□□□□□ -1.39
PCDH11X-204ENST00000373088 HSPA5P11021 654 aaKnown RBP6.37□□□□□ -1.39
PCDH11X-204ENST00000373088 AKNAQ7Z591 1439 aa6.37□□□□□ -1.39
PCDH11X-204ENST00000373088 ROCK1Q13464 1354 aa6.36□□□□□ -1.39
PCDH11X-204ENST00000373088 TCOF1Q13428 1488 aaKnown RBP6.36□□□□□ -1.39
PCDH11X-204ENST00000373088 ABCA8O94911 1581 aa6.36□□□□□ -1.39
PCDH11X-204ENST00000373088 RAPGEF3O95398 923 aa6.36□□□□□ -1.39
PCDH11X-204ENST00000373088 MLECQ14165 292 aa6.36□□□□□ -1.39
PCDH11X-204ENST00000373088 CARD11Q9BXL7 1154 aa6.36□□□□□ -1.39
PCDH11X-204ENST00000373088 ABCC2Q92887 1545 aa6.35□□□□□ -1.39
PCDH11X-204ENST00000373088 SCAPERQ9BY12 1400 aa6.35□□□□□ -1.39
PCDH11X-204ENST00000373088 MAPKBP1O60336 1514 aa6.35□□□□□ -1.39
PCDH11X-204ENST00000373088 TRHP20396 242 aaPredicted RBP6.35□□□□□ -1.39
PCDH11X-204ENST00000373088 LRRIQ1Q96JM4 1722 aa6.34□□□□□ -1.39
PCDH11X-204ENST00000373088 ASXL2Q76L83 1435 aa6.34□□□□□ -1.39
PCDH11X-204ENST00000373088 ESF1Q9H501 851 aaKnown RBP6.34□□□□□ -1.4
PCDH11X-204ENST00000373088 CCDC141Q6ZP82 1450 aa6.33□□□□□ -1.4
PCDH11X-204ENST00000373088 KANK1Q14678 1352 aa6.33□□□□□ -1.4
PCDH11X-204ENST00000373088 NBPF8Q3BBV2 869 aa6.33□□□□□ -1.4
PCDH11X-204ENST00000373088 STAG3Q9UJ98 1225 aa6.33□□□□□ -1.4
PCDH11X-204ENST00000373088 ARID4BQ4LE39 1312 aaPredicted RBP6.33□□□□□ -1.4
PCDH11X-204ENST00000373088 PLCH2O75038 1416 aa6.32□□□□□ -1.4
PCDH11X-204ENST00000373088 CD109Q6YHK3 1445 aa6.32□□□□□ -1.4
PCDH11X-204ENST00000373088 ABCC10Q5T3U5 1492 aa6.32□□□□□ -1.4
PCDH11X-204ENST00000373088 ANKRD30BQ9BXX2 1392 aa6.32□□□□□ -1.4
PCDH11X-204ENST00000373088 WASHC2CQ9Y4E1 1318 aa6.31□□□□□ -1.4
PCDH11X-204ENST00000373088 TRAPPC8Q9Y2L5 1435 aa6.31□□□□□ -1.4
PCDH11X-204ENST00000373088 SYCP2Q9BX26 1530 aa6.31□□□□□ -1.4
PCDH11X-204ENST00000373088 PLEKHH2Q8IVE3 1493 aa6.31□□□□□ -1.4
PCDH11X-204ENST00000373088 WDR7Q9Y4E6 1490 aa6.31□□□□□ -1.4
PCDH11X-204ENST00000373088 CCDC144AA2RUR9 1427 aa6.31□□□□□ -1.4
PCDH11X-204ENST00000373088 KIAA1107Q9UPP5 1409 aa6.31□□□□□ -1.4
PCDH11X-204ENST00000373088 FANCAO15360 1455 aa6.3□□□□□ -1.4
PCDH11X-204ENST00000373088 NUTM2DQ5VT03 806 aaPredicted RBP6.3□□□□□ -1.4
PCDH11X-204ENST00000373088 BCANQ96GW7 911 aa6.3□□□□□ -1.4
PCDH11X-204ENST00000373088 GTF3C3Q9Y5Q9 886 aa6.3□□□□□ -1.4
PCDH11X-204ENST00000373088 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.29□□□□□ -1.4
PCDH11X-204ENST00000373088 ADGRL1O94910 1474 aa6.29□□□□□ -1.4
PCDH11X-204ENST00000373088 KDM6BO15054 1643 aa6.29□□□□□ -1.4
PCDH11X-204ENST00000373088 CLASP1Q7Z460 1538 aa6.29□□□□□ -1.4
PCDH11X-204ENST00000373088 KDM5BQ9UGL1 1544 aa6.29□□□□□ -1.4
PCDH11X-204ENST00000373088 ITSN2Q9NZM3 1697 aa6.29□□□□□ -1.4
PCDH11X-204ENST00000373088 DNMT1P26358 1616 aaKnown RBP6.29□□□□□ -1.4
PCDH11X-204ENST00000373088 MBD5Q9P267 1494 aa6.28□□□□□ -1.4
PCDH11X-204ENST00000373088 ST20-MTHFSA0A0A6YYL1 179 aa6.28□□□□□ -1.4
PCDH11X-204ENST00000373088 FAM9BQ8IZU0 186 aa6.28□□□□□ -1.4
PCDH11X-204ENST00000373088 ROCK2O75116 1388 aaKnown RBP6.28□□□□□ -1.4
PCDH11X-204ENST00000373088 SENP3-EIF4A1A0A087X0R7 540 aa6.28□□□□□ -1.4
PCDH11X-204ENST00000373088 UHRF1BP1LA0JNW5 1464 aa6.27□□□□□ -1.4
PCDH11X-204ENST00000373088 TTC37Q6PGP7 1564 aa6.27□□□□□ -1.41
PCDH11X-204ENST00000373088 NBPF1Q3BBV0 1214 aa6.27□□□□□ -1.41
PCDH11X-204ENST00000373088 MRS2Q9HD23 443 aa6.26□□□□□ -1.41
PCDH11X-204ENST00000373088 PZPP20742 1482 aa6.26□□□□□ -1.41
PCDH11X-204ENST00000373088 SHROOM2Q13796 1616 aa6.26□□□□□ -1.41
PCDH11X-204ENST00000373088 ZCCHC11Q5TAX3 1644 aaKnown RBP6.26□□□□□ -1.41
PCDH11X-204ENST00000373088 USP47Q96K76 1375 aa6.26□□□□□ -1.41
PCDH11X-204ENST00000373088 HNRNPUQ00839 825 aaKnown RBP eCLIP6.25□□□□□ -1.41
PCDH11X-204ENST00000373088 WASHC2AQ641Q2 1341 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms