RNA–Protein interactions for RNA: ENST00000372633.1

RAB40A-202, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 BASIC

Gene RAB40A, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-202ENST00000372633 LAMC3Q9Y6N6 1575 aa18.81■□□□□ 0.6
RAB40A-202ENST00000372633 TEX14Q8IWB6 1497 aa18.8■□□□□ 0.6
RAB40A-202ENST00000372633 CHIC2Q9UKJ5 165 aa18.8■□□□□ 0.6
RAB40A-202ENST00000372633 ANKRD30BQ9BXX2 1392 aa18.79■□□□□ 0.6
RAB40A-202ENST00000372633 TDRD9Q8NDG6 1382 aaKnown RBP18.79■□□□□ 0.6
RAB40A-202ENST00000372633 MRS2Q9HD23 443 aa18.78■□□□□ 0.6
RAB40A-202ENST00000372633 EPRSP07814 1512 aaKnown RBP18.78■□□□□ 0.6
RAB40A-202ENST00000372633 ROCK1Q13464 1354 aa18.77■□□□□ 0.59
RAB40A-202ENST00000372633 FAM9BQ8IZU0 186 aa18.76■□□□□ 0.59
RAB40A-202ENST00000372633 B4GALNT3Q6L9W6 998 aa18.75■□□□□ 0.59
RAB40A-202ENST00000372633 NBPF8Q3BBV2 869 aa18.75■□□□□ 0.59
RAB40A-202ENST00000372633 KIF7Q2M1P5 1343 aa18.74■□□□□ 0.59
RAB40A-202ENST00000372633 SMG6Q86US8 1419 aaKnown RBP18.73■□□□□ 0.59
RAB40A-202ENST00000372633 WDR62O43379 1518 aa18.71■□□□□ 0.59
RAB40A-202ENST00000372633 RNF123Q5XPI4 1314 aa18.7■□□□□ 0.58
RAB40A-202ENST00000372633 DNMT1P26358 1616 aaKnown RBP18.7■□□□□ 0.58
RAB40A-202ENST00000372633 FOXD1Q16676 465 aa18.69■□□□□ 0.58
RAB40A-202ENST00000372633 DAPK1P53355 1430 aa18.69■□□□□ 0.58
RAB40A-202ENST00000372633 CDK13Q14004 1512 aaKnown RBP18.69■□□□□ 0.58
RAB40A-202ENST00000372633 IQGAP2Q13576 1575 aa18.69■□□□□ 0.58
RAB40A-202ENST00000372633 TARBP1Q13395 1621 aaKnown RBP18.69■□□□□ 0.58
RAB40A-202ENST00000372633 DHX29Q7Z478 1369 aaKnown RBP18.67■□□□□ 0.58
RAB40A-202ENST00000372633 ABCC5O15440 1437 aa18.66■□□□□ 0.58
RAB40A-202ENST00000372633 MBD5Q9P267 1494 aa18.65■□□□□ 0.58
RAB40A-202ENST00000372633 PBRM1Q86U86 1689 aa18.64■□□□□ 0.57
RAB40A-202ENST00000372633 NOP58Q9Y2X3 529 aaKnown RBP18.63■□□□□ 0.57
RAB40A-202ENST00000372633 NUDCQ9Y266 331 aa18.63■□□□□ 0.57
RAB40A-202ENST00000372633 BCORL1Q5H9F3 1711 aa18.62■□□□□ 0.57
RAB40A-202ENST00000372633 PZPP20742 1482 aa18.6■□□□□ 0.57
RAB40A-202ENST00000372633 ARID4BQ4LE39 1312 aaPredicted RBP18.6■□□□□ 0.57
RAB40A-202ENST00000372633 DEKP35659 375 aaKnown RBP18.6■□□□□ 0.57
RAB40A-202ENST00000372633 PDS5BQ9NTI5 1447 aa18.6■□□□□ 0.57
RAB40A-202ENST00000372633 ADAMTS12P58397 1594 aa18.59■□□□□ 0.57
RAB40A-202ENST00000372633 SLC4A1APQ9BWU0 796 aaKnown RBP18.59■□□□□ 0.57
RAB40A-202ENST00000372633 KIF14Q15058 1648 aa18.57■□□□□ 0.56
RAB40A-202ENST00000372633 KDM5CP41229 1560 aa18.57■□□□□ 0.56
RAB40A-202ENST00000372633 PAK3O75914 559 aaPredicted RBP18.55■□□□□ 0.56
RAB40A-202ENST00000372633 USP47Q96K76 1375 aa18.54■□□□□ 0.56
RAB40A-202ENST00000372633 ADGBQ8N7X0 1667 aa18.54■□□□□ 0.56
RAB40A-202ENST00000372633 CCDC136Q96JN2 1154 aa18.53■□□□□ 0.56
RAB40A-202ENST00000372633 PNISRQ8TF01 805 aaKnown RBP18.52■□□□□ 0.56
RAB40A-202ENST00000372633 KIAA1107Q9UPP5 1409 aa18.52■□□□□ 0.56
RAB40A-202ENST00000372633 ZNF644Q9H582 1327 aaPredicted RBP18.52■□□□□ 0.55
RAB40A-202ENST00000372633 IPO9Q96P70 1041 aaKnown RBP18.52■□□□□ 0.55
RAB40A-202ENST00000372633 ROCK2O75116 1388 aaKnown RBP18.51■□□□□ 0.55
RAB40A-202ENST00000372633 NUP153P49790 1475 aaKnown RBP18.51■□□□□ 0.55
RAB40A-202ENST00000372633 UHRF1BP1Q6BDS2 1440 aa18.5■□□□□ 0.55
RAB40A-202ENST00000372633 ADGRL2O95490 1459 aa18.5■□□□□ 0.55
RAB40A-202ENST00000372633 KIAA0556O60303 1618 aa18.49■□□□□ 0.55
RAB40A-202ENST00000372633 LRPPRCP42704 1394 aaKnown RBP18.49■□□□□ 0.55
RAB40A-202ENST00000372633 CROCC2H7BZ55 1655 aa18.48■□□□□ 0.55
RAB40A-202ENST00000372633 ANP32AP39687 249 aaKnown RBP18.48■□□□□ 0.55
RAB40A-202ENST00000372633 RAPGEF6Q8TEU7 1601 aa18.48■□□□□ 0.55
RAB40A-202ENST00000372633 DISP1Q96F81 1524 aa18.47■□□□□ 0.55
RAB40A-202ENST00000372633 RALGAPBQ86X10 1494 aa18.47■□□□□ 0.55
RAB40A-202ENST00000372633 ITSN2Q9NZM3 1697 aa18.46■□□□□ 0.55
RAB40A-202ENST00000372633 CAMSAP2Q08AD1 1489 aa18.46■□□□□ 0.55
RAB40A-202ENST00000372633 KTN1Q86UP2 1357 aaKnown RBP18.45■□□□□ 0.54
RAB40A-202ENST00000372633 ARID3CA6NKF2 412 aa18.45■□□□□ 0.54
RAB40A-202ENST00000372633 NBR1Q14596 966 aa18.43■□□□□ 0.54
RAB40A-202ENST00000372633 KIAA0586Q9BVV6 1533 aa18.43■□□□□ 0.54
RAB40A-202ENST00000372633 ARHGEF12Q9NZN5 1544 aa18.43■□□□□ 0.54
RAB40A-202ENST00000372633 BRD4O60885 1362 aaPredicted RBP18.42■□□□□ 0.54
RAB40A-202ENST00000372633 KIF15Q9NS87 1388 aa18.42■□□□□ 0.54
RAB40A-202ENST00000372633 E9PCH4 1651 aa18.42■□□□□ 0.54
RAB40A-202ENST00000372633 ADCY10Q96PN6 1610 aa18.42■□□□□ 0.54
RAB40A-202ENST00000372633 TMC1Q8TDI8 760 aa18.42■□□□□ 0.54
RAB40A-202ENST00000372633 TROQ12816 1431 aaPredicted RBP18.42■□□□□ 0.54
RAB40A-202ENST00000372633 ZBTB47Q9UFB7 747 aaPredicted RBP18.41■□□□□ 0.54
RAB40A-202ENST00000372633 GPATCH8Q9UKJ3 1502 aaKnown RBP18.4■□□□□ 0.54
RAB40A-202ENST00000372633 PKD2Q13563 968 aa18.39■□□□□ 0.53
RAB40A-202ENST00000372633 MYBBP1AQ9BQG0 1328 aaKnown RBP18.37■□□□□ 0.53
RAB40A-202ENST00000372633 RALBP1Q15311 655 aa18.37■□□□□ 0.53
RAB40A-202ENST00000372633 PRG4Q92954 1404 aaPredicted RBP18.37■□□□□ 0.53
RAB40A-202ENST00000372633 RRP1P56182 461 aaKnown RBP18.36■□□□□ 0.53
RAB40A-202ENST00000372633 ANKRD30AQ9BXX3 1397 aa18.36■□□□□ 0.53
RAB40A-202ENST00000372633 POLR3GLQ9BT43 218 aa18.36■□□□□ 0.53
RAB40A-202ENST00000372633 CFDP1Q9UEE9 299 aaPredicted RBP18.36■□□□□ 0.53
RAB40A-202ENST00000372633 KDM5DQ9BY66 1539 aa18.36■□□□□ 0.53
RAB40A-202ENST00000372633 ANKRD50Q9ULJ7 1429 aa18.35■□□□□ 0.53
RAB40A-202ENST00000372633 TCERG1O14776 1098 aaKnown RBP18.34■□□□□ 0.53
RAB40A-202ENST00000372633 ZNF326Q5BKZ1 582 aaKnown RBP18.34■□□□□ 0.53
RAB40A-202ENST00000372633 CNGB1Q14028 1251 aaPredicted RBP18.34■□□□□ 0.53
RAB40A-202ENST00000372633 CARD11Q9BXL7 1154 aa18.33■□□□□ 0.52
RAB40A-202ENST00000372633 CEP170Q5SW79 1584 aa18.32■□□□□ 0.52
RAB40A-202ENST00000372633 RTL5Q5HYW3 569 aaPredicted RBP18.32■□□□□ 0.52
RAB40A-202ENST00000372633 SHANK2Q9UPX8 1470 aa18.32■□□□□ 0.52
RAB40A-202ENST00000372633 PDE3BQ13370 1112 aa18.31■□□□□ 0.52
RAB40A-202ENST00000372633 MS4A1P11836 297 aa18.3■□□□□ 0.52
RAB40A-202ENST00000372633 RCAN3Q9UKA8 241 aa18.3■□□□□ 0.52
RAB40A-202ENST00000372633 MRC2Q9UBG0 1479 aa18.3■□□□□ 0.52
RAB40A-202ENST00000372633 CDC42BPAQ5VT25 1732 aa18.3■□□□□ 0.52
RAB40A-202ENST00000372633 EXOC6Q8TAG9 804 aa18.29■□□□□ 0.52
RAB40A-202ENST00000372633 ST20-MTHFSA0A0A6YYL1 179 aa18.29■□□□□ 0.52
RAB40A-202ENST00000372633 PARD3Q8TEW0 1356 aa18.28■□□□□ 0.52
RAB40A-202ENST00000372633 PTPRGP23470 1445 aa18.28■□□□□ 0.52
RAB40A-202ENST00000372633 GRIN2AQ12879 1464 aa18.28■□□□□ 0.52
RAB40A-202ENST00000372633 INSRP06213 1382 aa18.27■□□□□ 0.52
RAB40A-202ENST00000372633 IFT140Q96RY7 1462 aa18.27■□□□□ 0.52
RAB40A-202ENST00000372633 SENP3-EIF4A1A0A087X0R7 540 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 307.8 ms