RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 DISP1Q96F81 1524 aa23.27■■□□□ 1.32
PCIF1-201ENST00000372409 CDK11AQ9UQ88 783 aaPredicted RBP23.26■■□□□ 1.31
PCIF1-201ENST00000372409 NUP153P49790 1475 aaKnown RBP23.26■■□□□ 1.31
PCIF1-201ENST00000372409 ABCC5O15440 1437 aa23.25■■□□□ 1.31
PCIF1-201ENST00000372409 SLC4A1APQ9BWU0 796 aaKnown RBP23.24■■□□□ 1.31
PCIF1-201ENST00000372409 ROCK1Q13464 1354 aa23.23■■□□□ 1.31
PCIF1-201ENST00000372409 RAPGEF6Q8TEU7 1601 aa23.22■■□□□ 1.31
PCIF1-201ENST00000372409 DNMT1P26358 1616 aaKnown RBP23.22■■□□□ 1.31
PCIF1-201ENST00000372409 GRIN2AQ12879 1464 aa23.21■■□□□ 1.31
PCIF1-201ENST00000372409 ANKRD30BQ9BXX2 1392 aa23.2■■□□□ 1.3
PCIF1-201ENST00000372409 NBPF8Q3BBV2 869 aa23.18■■□□□ 1.3
PCIF1-201ENST00000372409 C11orf95C9JLR9 678 aaPredicted RBP23.18■■□□□ 1.3
PCIF1-201ENST00000372409 FBLN2P98095 1184 aa23.18■■□□□ 1.3
PCIF1-201ENST00000372409 ZNF777Q9ULD5 760 aaPredicted RBP23.18■■□□□ 1.3
PCIF1-201ENST00000372409 PRG4Q92954 1404 aaPredicted RBP23.17■■□□□ 1.3
PCIF1-201ENST00000372409 CNTLNQ9NXG0 1405 aa23.17■■□□□ 1.3
PCIF1-201ENST00000372409 RPRD2Q5VT52 1461 aaKnown RBP23.17■■□□□ 1.3
PCIF1-201ENST00000372409 EIF4G3O43432 1585 aaKnown RBP23.17■■□□□ 1.3
PCIF1-201ENST00000372409 CFDP1Q9UEE9 299 aaPredicted RBP23.17■■□□□ 1.3
PCIF1-201ENST00000372409 CHMP7Q8WUX9 453 aaPredicted RBP23.16■■□□□ 1.3
PCIF1-201ENST00000372409 CCDC7Q96M83 1385 aa23.14■■□□□ 1.29
PCIF1-201ENST00000372409 CCDC184Q52MB2 194 aa23.12■■□□□ 1.29
PCIF1-201ENST00000372409 NCOA1Q15788 1441 aa23.12■■□□□ 1.29
PCIF1-201ENST00000372409 TROQ12816 1431 aaPredicted RBP23.11■■□□□ 1.29
PCIF1-201ENST00000372409 PLB1Q6P1J6 1458 aa23.11■■□□□ 1.29
PCIF1-201ENST00000372409 TEX14Q8IWB6 1497 aa23.11■■□□□ 1.29
PCIF1-201ENST00000372409 CAMSAP2Q08AD1 1489 aa23.1■■□□□ 1.29
PCIF1-201ENST00000372409 IRX6P78412 446 aaPredicted RBP23.1■■□□□ 1.29
PCIF1-201ENST00000372409 ERCC6Q03468 1493 aa23.09■■□□□ 1.29
PCIF1-201ENST00000372409 FAM9BQ8IZU0 186 aa23.08■■□□□ 1.29
PCIF1-201ENST00000372409 PRKRIP1Q9H875 184 aaPredicted RBP23.08■■□□□ 1.28
PCIF1-201ENST00000372409 ZNF326Q5BKZ1 582 aaKnown RBP23.06■■□□□ 1.28
PCIF1-201ENST00000372409 MRS2Q9HD23 443 aa23.05■■□□□ 1.28
PCIF1-201ENST00000372409 CEP170Q5SW79 1584 aa23.04■■□□□ 1.28
PCIF1-201ENST00000372409 KIF7Q2M1P5 1343 aa23.04■■□□□ 1.28
PCIF1-201ENST00000372409 GPATCH8Q9UKJ3 1502 aaKnown RBP23.04■■□□□ 1.28
PCIF1-201ENST00000372409 KIF14Q15058 1648 aa23.04■■□□□ 1.28
PCIF1-201ENST00000372409 ITSN2Q9NZM3 1697 aa23.04■■□□□ 1.28
PCIF1-201ENST00000372409 PZPP20742 1482 aa23.04■■□□□ 1.28
PCIF1-201ENST00000372409 MAGI1Q96QZ7 1491 aaPredicted RBP23.03■■□□□ 1.28
PCIF1-201ENST00000372409 POLR3GLQ9BT43 218 aa23.02■■□□□ 1.27
PCIF1-201ENST00000372409 CNGB1Q14028 1251 aaPredicted RBP23.01■■□□□ 1.27
PCIF1-201ENST00000372409 JPH4Q96JJ6 628 aa23.01■■□□□ 1.27
PCIF1-201ENST00000372409 SYNJ2O15056 1496 aa23.01■■□□□ 1.27
PCIF1-201ENST00000372409 CARMIL2Q6F5E8 1435 aa23■■□□□ 1.27
PCIF1-201ENST00000372409 PKD2Q13563 968 aa23■■□□□ 1.27
PCIF1-201ENST00000372409 ADGBQ8N7X0 1667 aa23■■□□□ 1.27
PCIF1-201ENST00000372409 RBM19Q9Y4C8 960 aaKnown RBP23■■□□□ 1.27
PCIF1-201ENST00000372409 SPATA31E1Q6ZUB1 1445 aa22.99■■□□□ 1.27
PCIF1-201ENST00000372409 ANKRD30AQ9BXX3 1397 aa22.98■■□□□ 1.27
PCIF1-201ENST00000372409 KIAA1107Q9UPP5 1409 aa22.97■■□□□ 1.27
PCIF1-201ENST00000372409 PLEKHD1A6NEE1 506 aa22.96■■□□□ 1.27
PCIF1-201ENST00000372409 ADCY10Q96PN6 1610 aa22.94■■□□□ 1.26
PCIF1-201ENST00000372409 ANP32EQ9BTT0 268 aa22.93■■□□□ 1.26
PCIF1-201ENST00000372409 CROCC2H7BZ55 1655 aa22.93■■□□□ 1.26
PCIF1-201ENST00000372409 ADGRL2O95490 1459 aa22.93■■□□□ 1.26
PCIF1-201ENST00000372409 ANKRD50Q9ULJ7 1429 aa22.92■■□□□ 1.26
PCIF1-201ENST00000372409 POLR1AO95602 1720 aaPredicted RBP22.91■■□□□ 1.26
PCIF1-201ENST00000372409 USP47Q96K76 1375 aa22.91■■□□□ 1.26
PCIF1-201ENST00000372409 NUP155O75694 1391 aa22.89■■□□□ 1.25
PCIF1-201ENST00000372409 NUP160Q12769 1436 aa22.88■■□□□ 1.25
PCIF1-201ENST00000372409 ZBED9Q6R2W3 1325 aa22.88■■□□□ 1.25
PCIF1-201ENST00000372409 MBD5Q9P267 1494 aa22.88■■□□□ 1.25
PCIF1-201ENST00000372409 TSPY4P0CV99 314 aa22.86■■□□□ 1.25
PCIF1-201ENST00000372409 TSPY10P0CW01 314 aa22.86■■□□□ 1.25
PCIF1-201ENST00000372409 C9orf84Q5VXU9 1444 aa22.85■■□□□ 1.25
PCIF1-201ENST00000372409 CDC42BPAQ5VT25 1732 aa22.85■■□□□ 1.25
PCIF1-201ENST00000372409 ATP10BO94823 1461 aa22.84■■□□□ 1.25
PCIF1-201ENST00000372409 KDM2AQ9Y2K7 1162 aa22.83■■□□□ 1.24
PCIF1-201ENST00000372409 BCORL1Q5H9F3 1711 aa22.82■■□□□ 1.24
PCIF1-201ENST00000372409 HNRNPMP52272 730 aaKnown RBP eCLIP22.82■■□□□ 1.24
PCIF1-201ENST00000372409 PPP4R2Q9NY27 417 aa22.81■■□□□ 1.24
PCIF1-201ENST00000372409 ABCA8O94911 1581 aa22.81■■□□□ 1.24
PCIF1-201ENST00000372409 ABCC10Q5T3U5 1492 aa22.8■■□□□ 1.24
PCIF1-201ENST00000372409 CARD11Q9BXL7 1154 aa22.8■■□□□ 1.24
PCIF1-201ENST00000372409 DHX29Q7Z478 1369 aaKnown RBP22.8■■□□□ 1.24
PCIF1-201ENST00000372409 ERICH6BQ5W0A0 696 aa22.79■■□□□ 1.24
PCIF1-201ENST00000372409 KDM5CP41229 1560 aa22.78■■□□□ 1.24
PCIF1-201ENST00000372409 SHANK2Q9UPX8 1470 aa22.77■■□□□ 1.24
PCIF1-201ENST00000372409 KIF15Q9NS87 1388 aa22.77■■□□□ 1.24
PCIF1-201ENST00000372409 SENP3-EIF4A1A0A087X0R7 540 aa22.75■■□□□ 1.23
PCIF1-201ENST00000372409 DCAF11Q8TEB1 546 aa22.75■■□□□ 1.23
PCIF1-201ENST00000372409 B4GALNT3Q6L9W6 998 aa22.74■■□□□ 1.23
PCIF1-201ENST00000372409 RALGAPBQ86X10 1494 aa22.73■■□□□ 1.23
PCIF1-201ENST00000372409 ARID4BQ4LE39 1312 aaPredicted RBP22.72■■□□□ 1.23
PCIF1-201ENST00000372409 UHRF1BP1Q6BDS2 1440 aa22.72■■□□□ 1.23
PCIF1-201ENST00000372409 PTPRGP23470 1445 aa22.71■■□□□ 1.23
PCIF1-201ENST00000372409 ST20-MTHFSA0A0A6YYL1 179 aa22.71■■□□□ 1.23
PCIF1-201ENST00000372409 TMC1Q8TDI8 760 aa22.69■■□□□ 1.22
PCIF1-201ENST00000372409 ROCK2O75116 1388 aaKnown RBP22.68■■□□□ 1.22
PCIF1-201ENST00000372409 ARHGEF12Q9NZN5 1544 aa22.67■■□□□ 1.22
PCIF1-201ENST00000372409 KDM5DQ9BY66 1539 aa22.67■■□□□ 1.22
PCIF1-201ENST00000372409 ARHGEF5Q12774 1597 aa22.64■■□□□ 1.22
PCIF1-201ENST00000372409 CCDC141Q6ZP82 1450 aa22.64■■□□□ 1.22
PCIF1-201ENST00000372409 SMG6Q86US8 1419 aaKnown RBP22.63■■□□□ 1.21
PCIF1-201ENST00000372409 MSH5O43196 834 aa22.63■■□□□ 1.21
PCIF1-201ENST00000372409 RGL3Q3MIN7 710 aa22.63■■□□□ 1.21
PCIF1-201ENST00000372409 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.63■■□□□ 1.211e-6■■■□□ 14.6
PCIF1-201ENST00000372409 NUDCQ9Y266 331 aa22.63■■□□□ 1.21
PCIF1-201ENST00000372409 SAMD9LQ8IVG5 1584 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms