RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 ABCC5O15440 1437 aa25.99■■□□□ 1.75
SSBP3-203ENST00000371319 AKNAQ7Z591 1439 aa25.99■■□□□ 1.75
SSBP3-203ENST00000371319 PREX2Q70Z35 1606 aa25.97■■□□□ 1.75
SSBP3-203ENST00000371319 TTC37Q6PGP7 1564 aa25.96■■□□□ 1.75
SSBP3-203ENST00000371319 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.96■■□□□ 1.754e-8■■■□□ 18.8
SSBP3-203ENST00000371319 CDC42BPBQ9Y5S2 1711 aa25.96■■□□□ 1.75
SSBP3-203ENST00000371319 CROCC2H7BZ55 1655 aa25.94■■□□□ 1.74
SSBP3-203ENST00000371319 MAPKBP1O60336 1514 aa25.92■■□□□ 1.74
SSBP3-203ENST00000371319 CHIC2Q9UKJ5 165 aa25.91■■□□□ 1.74
SSBP3-203ENST00000371319 ROCK1Q13464 1354 aa25.9■■□□□ 1.74
SSBP3-203ENST00000371319 MYO5CQ9NQX4 1742 aa25.88■■□□□ 1.73
SSBP3-203ENST00000371319 ADGBQ8N7X0 1667 aa25.88■■□□□ 1.73
SSBP3-203ENST00000371319 RRP7BPQ9NSQ0 103 aa25.88■■□□□ 1.73
SSBP3-203ENST00000371319 ZNF777Q9ULD5 760 aaPredicted RBP25.88■■□□□ 1.73
SSBP3-203ENST00000371319 SAMD9LQ8IVG5 1584 aa25.87■■□□□ 1.73
SSBP3-203ENST00000371319 KDM6BO15054 1643 aa25.86■■□□□ 1.73
SSBP3-203ENST00000371319 ARHGEF5Q12774 1597 aa25.83■■□□□ 1.73
SSBP3-203ENST00000371319 ADGRL2O95490 1459 aa25.82■■□□□ 1.72
SSBP3-203ENST00000371319 KCNH8Q96L42 1107 aa25.82■■□□□ 1.72
SSBP3-203ENST00000371319 WDR7Q9Y4E6 1490 aa25.81■■□□□ 1.72
SSBP3-203ENST00000371319 ARHGAP5Q13017 1502 aa25.8■■□□□ 1.72
SSBP3-203ENST00000371319 SHANK2Q9UPX8 1470 aa25.8■■□□□ 1.72
SSBP3-203ENST00000371319 MBD5Q9P267 1494 aa25.79■■□□□ 1.72
SSBP3-203ENST00000371319 PLCH2O75038 1416 aa25.76■■□□□ 1.71
SSBP3-203ENST00000371319 NCOA1Q15788 1441 aa25.76■■□□□ 1.71
SSBP3-203ENST00000371319 ASXL2Q76L83 1435 aa25.73■■□□□ 1.71
SSBP3-203ENST00000371319 SYCP2Q9BX26 1530 aa25.72■■□□□ 1.71
SSBP3-203ENST00000371319 ABCA9Q8IUA7 1624 aa25.72■■□□□ 1.71
SSBP3-203ENST00000371319 CCDC141Q6ZP82 1450 aa25.72■■□□□ 1.71
SSBP3-203ENST00000371319 C9orf84Q5VXU9 1444 aa25.71■■□□□ 1.71
SSBP3-203ENST00000371319 ARAP3Q8WWN8 1544 aa25.71■■□□□ 1.71
SSBP3-203ENST00000371319 HNRNPMP52272 730 aaKnown RBP eCLIP25.71■■□□□ 1.711e-6■■■■□ 26.1
SSBP3-203ENST00000371319 PLEKHH2Q8IVE3 1493 aa25.7■■□□□ 1.7
SSBP3-203ENST00000371319 ANKRD30AQ9BXX3 1397 aa25.69■■□□□ 1.7
SSBP3-203ENST00000371319 KIAA1107Q9UPP5 1409 aa25.69■■□□□ 1.7
SSBP3-203ENST00000371319 RIMBP3CA6NJZ7 1639 aa25.69■■□□□ 1.7
SSBP3-203ENST00000371319 RIMBP3BA6NNM3 1639 aa25.69■■□□□ 1.7
SSBP3-203ENST00000371319 RIMBP3Q9UFD9 1639 aa25.69■■□□□ 1.7
SSBP3-203ENST00000371319 MAST1Q9Y2H9 1570 aa25.67■■□□□ 1.7
SSBP3-203ENST00000371319 RSPH4AQ5TD94 716 aa25.65■■□□□ 1.7
SSBP3-203ENST00000371319 ABCC1P33527 1531 aa25.65■■□□□ 1.7
SSBP3-203ENST00000371319 ARHGEF12Q9NZN5 1544 aa25.65■■□□□ 1.7
SSBP3-203ENST00000371319 DENND4BO75064 1496 aaPredicted RBP25.65■■□□□ 1.7
SSBP3-203ENST00000371319 NPM1P06748 294 aaKnown RBP eCLIP25.64■■□□□ 1.69
SSBP3-203ENST00000371319 ACIN1Q9UKV3 1341 aaKnown RBP25.64■■□□□ 1.69
SSBP3-203ENST00000371319 EFCAB2Q5VUJ9 269 aa25.63■■□□□ 1.69
SSBP3-203ENST00000371319 TSPY4P0CV99 314 aa25.62■■□□□ 1.69
SSBP3-203ENST00000371319 TSPY10P0CW01 314 aa25.62■■□□□ 1.69
SSBP3-203ENST00000371319 TRIM52Q96A61 297 aa25.61■■□□□ 1.69
SSBP3-203ENST00000371319 SIN3AQ96ST3 1273 aa25.61■■□□□ 1.69
SSBP3-203ENST00000371319 ANKRD50Q9ULJ7 1429 aa25.58■■□□□ 1.68
SSBP3-203ENST00000371319 KIF15Q9NS87 1388 aa25.55■■□□□ 1.68
SSBP3-203ENST00000371319 PLXNC1O60486 1568 aa25.55■■□□□ 1.68
SSBP3-203ENST00000371319 MPHOSPH9Q99550 1183 aa25.55■■□□□ 1.68
SSBP3-203ENST00000371319 FANCAO15360 1455 aa25.53■■□□□ 1.68
SSBP3-203ENST00000371319 PZPP20742 1482 aa25.53■■□□□ 1.68
SSBP3-203ENST00000371319 TRAPPC8Q9Y2L5 1435 aa25.52■■□□□ 1.68
SSBP3-203ENST00000371319 NEUROD1Q13562 356 aa25.52■■□□□ 1.68
SSBP3-203ENST00000371319 CYB5RLQ6IPT4 315 aa25.49■■□□□ 1.67
SSBP3-203ENST00000371319 TIMELESSQ9UNS1 1208 aa25.48■■□□□ 1.67
SSBP3-203ENST00000371319 KDM5DQ9BY66 1539 aa25.47■■□□□ 1.67
SSBP3-203ENST00000371319 ZNF316A6NFI3 1004 aaPredicted RBP25.44■■□□□ 1.66
SSBP3-203ENST00000371319 CFAP74Q9C0B2 1584 aa25.43■■□□□ 1.66
SSBP3-203ENST00000371319 CD109Q6YHK3 1445 aa25.42■■□□□ 1.66
SSBP3-203ENST00000371319 ADGRL1O94910 1474 aa25.42■■□□□ 1.66
SSBP3-203ENST00000371319 DUOX2Q9NRD8 1548 aa25.42■■□□□ 1.66
SSBP3-203ENST00000371319 ZFYVE16Q7Z3T8 1539 aa25.41■■□□□ 1.66
SSBP3-203ENST00000371319 SLC4A1APQ9BWU0 796 aaKnown RBP25.41■■□□□ 1.66
SSBP3-203ENST00000371319 RTEL1-TNFRSF6BF6WH68 1400 aa25.41■■□□□ 1.66
SSBP3-203ENST00000371319 ANKRD30BQ9BXX2 1392 aa25.4■■□□□ 1.66
SSBP3-203ENST00000371319 UNC13BO14795 1591 aa25.39■■□□□ 1.66
SSBP3-203ENST00000371319 INO80Q9ULG1 1556 aaPredicted RBP25.39■■□□□ 1.66
SSBP3-203ENST00000371319 SCAPERQ9BY12 1400 aa25.39■■□□□ 1.65
SSBP3-203ENST00000371319 FOXD1Q16676 465 aa25.39■■□□□ 1.65
SSBP3-203ENST00000371319 NUP155O75694 1391 aa25.36■■□□□ 1.65
SSBP3-203ENST00000371319 TONSLQ96HA7 1378 aa25.36■■□□□ 1.65
SSBP3-203ENST00000371319 AFAP1Q8N556 730 aa25.36■■□□□ 1.65
SSBP3-203ENST00000371319 GLI2P10070 1586 aa25.36■■□□□ 1.65
SSBP3-203ENST00000371319 MAP3K4Q9Y6R4 1608 aa25.36■■□□□ 1.65
SSBP3-203ENST00000371319 SPAG9O60271 1321 aaKnown RBP25.36■■□□□ 1.65
SSBP3-203ENST00000371319 ERBINQ96RT1 1412 aa25.35■■□□□ 1.65
SSBP3-203ENST00000371319 ATP7AQ04656 1500 aa25.34■■□□□ 1.65
SSBP3-203ENST00000371319 PPP1R15AO75807 674 aaPredicted RBP25.33■■□□□ 1.65
SSBP3-203ENST00000371319 RPRD2Q5VT52 1461 aaKnown RBP25.3■■□□□ 1.64
SSBP3-203ENST00000371319 FAM135AQ9P2D6 1515 aa25.3■■□□□ 1.64
SSBP3-203ENST00000371319 MAGI2Q86UL8 1455 aa25.3■■□□□ 1.64
SSBP3-203ENST00000371319 PKD2Q13563 968 aa25.29■■□□□ 1.64
SSBP3-203ENST00000371319 NEO1Q92859 1461 aa25.29■■□□□ 1.64
SSBP3-203ENST00000371319 IQGAP3Q86VI3 1631 aa25.29■■□□□ 1.64
SSBP3-203ENST00000371319 DIP2BQ9P265 1576 aa25.28■■□□□ 1.64
SSBP3-203ENST00000371319 ZNF518AQ6AHZ1 1483 aa25.27■■□□□ 1.64
SSBP3-203ENST00000371319 KIDINS220Q9ULH0 1771 aa25.27■■□□□ 1.64
SSBP3-203ENST00000371319 KDM5CP41229 1560 aa25.26■■□□□ 1.63
SSBP3-203ENST00000371319 POGZQ7Z3K3 1410 aa25.26■■□□□ 1.63
SSBP3-203ENST00000371319 TEX14Q8IWB6 1497 aa25.21■■□□□ 1.63
SSBP3-203ENST00000371319 DEPDC5O75140 1603 aa25.21■■□□□ 1.63
SSBP3-203ENST00000371319 EIF2AK4Q9P2K8 1649 aaKnown RBP25.2■■□□□ 1.62
SSBP3-203ENST00000371319 DIEXFQ68CQ4 756 aaKnown RBP25.19■■□□□ 1.62
SSBP3-203ENST00000371319 HECW2Q9P2P5 1572 aa25.17■■□□□ 1.62
SSBP3-203ENST00000371319 MLH3Q9UHC1 1453 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms