RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 ABCA5Q8WWZ7 1642 aa10.18□□□□□ -0.78
USP1-202ENST00000371146 ATP10BO94823 1461 aa10.17□□□□□ -0.78
USP1-202ENST00000371146 VPS8Q8N3P4 1428 aa10.17□□□□□ -0.78
USP1-202ENST00000371146 FBXO31Q5XUX0 539 aaPredicted RBP10.16□□□□□ -0.78
USP1-202ENST00000371146 STK26Q9P289 416 aa10.16□□□□□ -0.78
USP1-202ENST00000371146 ARHGAP5Q13017 1502 aa10.15□□□□□ -0.78
USP1-202ENST00000371146 LMOD2Q6P5Q4 547 aa10.15□□□□□ -0.78
USP1-202ENST00000371146 DISP1Q96F81 1524 aa10.15□□□□□ -0.79
USP1-202ENST00000371146 HIRIP3Q9BW71 556 aaPredicted RBP10.13□□□□□ -0.79
USP1-202ENST00000371146 CCDC18Q5T9S5 1454 aa10.13□□□□□ -0.79
USP1-202ENST00000371146 ZBTB7CA1YPR0 619 aa10.12□□□□□ -0.79
USP1-202ENST00000371146 PIP4K2BP78356 416 aa10.12□□□□□ -0.79
USP1-202ENST00000371146 CUL7Q14999 1698 aa10.12□□□□□ -0.79
USP1-202ENST00000371146 PKD2Q13563 968 aa10.1□□□□□ -0.79
USP1-202ENST00000371146 KIF21BO75037 1637 aa10.1□□□□□ -0.79
USP1-202ENST00000371146 SLC26A8Q96RN1 970 aa10.1□□□□□ -0.79
USP1-202ENST00000371146 EPRSP07814 1512 aaKnown RBP10.1□□□□□ -0.79
USP1-202ENST00000371146 EIF5BO60841 1220 aaKnown RBP10.1□□□□□ -0.79
USP1-202ENST00000371146 ABCC2Q92887 1545 aa10.09□□□□□ -0.79
USP1-202ENST00000371146 NUP155O75694 1391 aa10.09□□□□□ -0.79
USP1-202ENST00000371146 SIN3AQ96ST3 1273 aa10.09□□□□□ -0.79
USP1-202ENST00000371146 PHLDB1Q86UU1 1377 aa10.09□□□□□ -0.79
USP1-202ENST00000371146 FANCAO15360 1455 aa10.08□□□□□ -0.8
USP1-202ENST00000371146 NUP153P49790 1475 aaKnown RBP10.08□□□□□ -0.8
USP1-202ENST00000371146 TROQ12816 1431 aaPredicted RBP10.07□□□□□ -0.8
USP1-202ENST00000371146 WDR7Q9Y4E6 1490 aa10.07□□□□□ -0.8
USP1-202ENST00000371146 ADGRL1O94910 1474 aa10.07□□□□□ -0.8
USP1-202ENST00000371146 A0A0G2JS52 829 aa10.07□□□□□ -0.8
USP1-202ENST00000371146 AKNAQ7Z591 1439 aa10.05□□□□□ -0.8
USP1-202ENST00000371146 SOX12O15370 315 aa10.05□□□□□ -0.8
USP1-202ENST00000371146 CASKIN1Q8WXD9 1431 aa10.05□□□□□ -0.8
USP1-202ENST00000371146 CENPBP07199 599 aaPredicted RBP10.04□□□□□ -0.8
USP1-202ENST00000371146 KIAA0556O60303 1618 aa10.04□□□□□ -0.8
USP1-202ENST00000371146 NCOA2Q15596 1464 aa10.03□□□□□ -0.8
USP1-202ENST00000371146 TXNDC2Q86VQ3 553 aa10.02□□□□□ -0.8
USP1-202ENST00000371146 DCAF11Q8TEB1 546 aa10.02□□□□□ -0.8
USP1-202ENST00000371146 KANK1Q14678 1352 aa10.02□□□□□ -0.81
USP1-202ENST00000371146 EID1Q9Y6B2 187 aa10.02□□□□□ -0.81
USP1-202ENST00000371146 DENND4BO75064 1496 aaPredicted RBP10.02□□□□□ -0.81
USP1-202ENST00000371146 HAP1P54257 671 aaPredicted RBP10.01□□□□□ -0.81
USP1-202ENST00000371146 KIF15Q9NS87 1388 aa10.01□□□□□ -0.81
USP1-202ENST00000371146 ANKRD30AQ9BXX3 1397 aa10.01□□□□□ -0.81
USP1-202ENST00000371146 TRAPPC8Q9Y2L5 1435 aa10.01□□□□□ -0.81
USP1-202ENST00000371146 UGGT2Q9NYU1 1516 aa10□□□□□ -0.81
USP1-202ENST00000371146 CLASP1Q7Z460 1538 aa9.99□□□□□ -0.81
USP1-202ENST00000371146 YEATS2Q9ULM3 1422 aa9.99□□□□□ -0.81
USP1-202ENST00000371146 PCF11O94913 1555 aaKnown RBP9.99□□□□□ -0.81
USP1-202ENST00000371146 NCKAP5LQ9HCH0 1330 aa9.98□□□□□ -0.81
USP1-202ENST00000371146 RSPH4AQ5TD94 716 aa9.98□□□□□ -0.81
USP1-202ENST00000371146 POGKQ9P215 609 aa9.98□□□□□ -0.81
USP1-202ENST00000371146 ABCC10Q5T3U5 1492 aa9.97□□□□□ -0.81
USP1-202ENST00000371146 KDM4FA0A1W2PPD8 638 aa9.97□□□□□ -0.81
USP1-202ENST00000371146 TMEM132EQ6IEE7 984 aa9.97□□□□□ -0.81
USP1-202ENST00000371146 MPHOSPH9Q99550 1183 aa9.96□□□□□ -0.81
USP1-202ENST00000371146 LRRC9Q6ZRR7 1453 aa9.96□□□□□ -0.81
USP1-202ENST00000371146 TMC1Q8TDI8 760 aa9.96□□□□□ -0.82
USP1-202ENST00000371146 WDR97A6NE52 1622 aa9.96□□□□□ -0.82
USP1-202ENST00000371146 RAPGEF6Q8TEU7 1601 aa9.96□□□□□ -0.82
USP1-202ENST00000371146 TEX14Q8IWB6 1497 aa9.94□□□□□ -0.82
USP1-202ENST00000371146 COL17A1Q9UMD9 1497 aaPredicted RBP9.94□□□□□ -0.82
USP1-202ENST00000371146 EFCAB5A4FU69 1503 aa9.94□□□□□ -0.82
USP1-202ENST00000371146 TRAK1Q9UPV9 953 aa9.94□□□□□ -0.82
USP1-202ENST00000371146 PAK3O75914 559 aaPredicted RBP9.94□□□□□ -0.82
USP1-202ENST00000371146 PLCH2O75038 1416 aa9.94□□□□□ -0.82
USP1-202ENST00000371146 MYOM3Q5VTT5 1437 aa9.94□□□□□ -0.82
USP1-202ENST00000371146 IDI1Q13907 227 aa9.93□□□□□ -0.82
USP1-202ENST00000371146 PROSER2Q86WR7 435 aaPredicted RBP9.93□□□□□ -0.82
USP1-202ENST00000371146 ADCY10Q96PN6 1610 aa9.93□□□□□ -0.82
USP1-202ENST00000371146 POGZQ7Z3K3 1410 aa9.93□□□□□ -0.82
USP1-202ENST00000371146 SENP3-EIF4A1A0A087X0R7 540 aa9.93□□□□□ -0.82
USP1-202ENST00000371146 XPCQ01831 940 aaPredicted RBP9.93□□□□□ -0.82
USP1-202ENST00000371146 FYCO1Q9BQS8 1478 aa9.92□□□□□ -0.82
USP1-202ENST00000371146 FGD6Q6ZV73 1430 aa9.92□□□□□ -0.82
USP1-202ENST00000371146 UBAP1LF5GYI3 381 aa9.92□□□□□ -0.82
USP1-202ENST00000371146 HECW1Q76N89 1606 aa9.92□□□□□ -0.82
USP1-202ENST00000371146 ANKLE2Q86XL3 938 aa9.92□□□□□ -0.82
USP1-202ENST00000371146 CFAP65Q6ZU64 1925 aaKnown RBP9.92□□□□□ -0.82
USP1-202ENST00000371146 NUTM2BA6NNL0 878 aaPredicted RBP9.91□□□□□ -0.82
USP1-202ENST00000371146 NUTM2EB1AL46 878 aaPredicted RBP9.91□□□□□ -0.82
USP1-202ENST00000371146 NUTM2AQ8IVF1 878 aaPredicted RBP9.91□□□□□ -0.82
USP1-202ENST00000371146 THEMISQ8N1K5 641 aaPredicted RBP9.91□□□□□ -0.82
USP1-202ENST00000371146 GPATCH8Q9UKJ3 1502 aaKnown RBP9.91□□□□□ -0.82
USP1-202ENST00000371146 CTTNBP2Q8WZ74 1663 aa9.91□□□□□ -0.82
USP1-202ENST00000371146 C9orf84Q5VXU9 1444 aa9.9□□□□□ -0.82
USP1-202ENST00000371146 KDM5BQ9UGL1 1544 aa9.9□□□□□ -0.82
USP1-202ENST00000371146 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.89□□□□□ -0.83
USP1-202ENST00000371146 TONSLQ96HA7 1378 aa9.89□□□□□ -0.83
USP1-202ENST00000371146 KDM6BO15054 1643 aa9.89□□□□□ -0.83
USP1-202ENST00000371146 ANKRD50Q9ULJ7 1429 aa9.89□□□□□ -0.83
USP1-202ENST00000371146 HDGFP51858 240 aaKnown RBP9.89□□□□□ -0.83
USP1-202ENST00000371146 PHF23Q9BUL5 403 aaPredicted RBP9.89□□□□□ -0.83
USP1-202ENST00000371146 CCDC9Q9Y3X0 531 aaKnown RBP9.89□□□□□ -0.83
USP1-202ENST00000371146 PLEKHH2Q8IVE3 1493 aa9.88□□□□□ -0.83
USP1-202ENST00000371146 RAB3GAP2Q9H2M9 1393 aa9.88□□□□□ -0.83
USP1-202ENST00000371146 NUTM2GQ5VZR2 741 aa9.87□□□□□ -0.83
USP1-202ENST00000371146 SYCP2Q9BX26 1530 aa9.87□□□□□ -0.83
USP1-202ENST00000371146 PPM1GO15355 546 aaPredicted RBP9.87□□□□□ -0.83
USP1-202ENST00000371146 TNNT2P45379 298 aaPredicted RBP9.87□□□□□ -0.83
USP1-202ENST00000371146 KIF14Q15058 1648 aa9.87□□□□□ -0.83
USP1-202ENST00000371146 ZCCHC11Q5TAX3 1644 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms