RNA–Protein interactions for RNA: ENST00000370819.5

COL21A1-203, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL21A1, Length 4,094 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-203ENST00000370819 MPHOSPH9Q99550 1183 aa9.89□□□□□ -0.83
COL21A1-203ENST00000370819 HSCBQ8IWL3 235 aa9.88□□□□□ -0.83
COL21A1-203ENST00000370819 GZF1Q9H116 711 aaPredicted RBP9.88□□□□□ -0.83
COL21A1-203ENST00000370819 HMGXB3Q12766 1538 aa9.88□□□□□ -0.83
COL21A1-203ENST00000370819 CC2D2AQ9P2K1 1620 aa9.87□□□□□ -0.83
COL21A1-203ENST00000370819 ARHGAP35Q9NRY4 1499 aa9.87□□□□□ -0.83
COL21A1-203ENST00000370819 ATAD2BQ9ULI0 1458 aa9.87□□□□□ -0.83
COL21A1-203ENST00000370819 MS4A1P11836 297 aa9.87□□□□□ -0.83
COL21A1-203ENST00000370819 DHX57Q6P158 1386 aaKnown RBP9.87□□□□□ -0.83
COL21A1-203ENST00000370819 L1TD1Q5T7N2 865 aaKnown RBP9.87□□□□□ -0.83
COL21A1-203ENST00000370819 KTN1Q86UP2 1357 aaKnown RBP9.86□□□□□ -0.83
COL21A1-203ENST00000370819 POGKQ9P215 609 aa9.86□□□□□ -0.83
COL21A1-203ENST00000370819 NCAPD3P42695 1498 aa9.85□□□□□ -0.83
COL21A1-203ENST00000370819 TOP2AP11388 1531 aaKnown RBP9.84□□□□□ -0.83
COL21A1-203ENST00000370819 ZRSR1Q15695 479 aaKnown RBP9.84□□□□□ -0.83
COL21A1-203ENST00000370819 MORC1Q86VD1 984 aa9.84□□□□□ -0.83
COL21A1-203ENST00000370819 A0A0G2JS52 829 aa9.83□□□□□ -0.84
COL21A1-203ENST00000370819 SAFB2Q14151 953 aaKnown RBP eCLIP9.83□□□□□ -0.84
COL21A1-203ENST00000370819 RALBP1Q15311 655 aa9.83□□□□□ -0.84
COL21A1-203ENST00000370819 CHMP4BQ9H444 224 aaKnown RBP9.82□□□□□ -0.84
COL21A1-203ENST00000370819 PNNQ9H307 717 aaKnown RBP9.82□□□□□ -0.84
COL21A1-203ENST00000370819 ANO8Q9HCE9 1232 aaPredicted RBP9.82□□□□□ -0.84
COL21A1-203ENST00000370819 APBB1O00213 710 aa9.81□□□□□ -0.84
COL21A1-203ENST00000370819 MSNP26038 577 aaKnown RBP9.81□□□□□ -0.84
COL21A1-203ENST00000370819 TAOK2Q9UL54 1235 aa9.81□□□□□ -0.84
COL21A1-203ENST00000370819 NLRP13Q86W25 1043 aa9.81□□□□□ -0.84
COL21A1-203ENST00000370819 SLC4A3P48751 1232 aa9.8□□□□□ -0.84
COL21A1-203ENST00000370819 CLUAP1Q96AJ1 413 aa9.8□□□□□ -0.84
COL21A1-203ENST00000370819 PRKRIP1Q9H875 184 aaPredicted RBP9.8□□□□□ -0.84
COL21A1-203ENST00000370819 NUP155O75694 1391 aa9.8□□□□□ -0.84
COL21A1-203ENST00000370819 U2AF1L5P0DN76 240 aaPredicted RBP9.79□□□□□ -0.84
COL21A1-203ENST00000370819 KCNJ4P48050 445 aa9.79□□□□□ -0.84
COL21A1-203ENST00000370819 U2AF1Q01081 240 aaKnown RBP eCLIP9.79□□□□□ -0.84
COL21A1-203ENST00000370819 FMN1Q68DA7 1419 aa9.79□□□□□ -0.84
COL21A1-203ENST00000370819 SOX12O15370 315 aa9.79□□□□□ -0.84
COL21A1-203ENST00000370819 SRPK2P78362 688 aaKnown RBP9.79□□□□□ -0.84
COL21A1-203ENST00000370819 ROCK2O75116 1388 aaKnown RBP9.79□□□□□ -0.84
COL21A1-203ENST00000370819 RUSC2Q8N2Y8 1516 aa9.79□□□□□ -0.84
COL21A1-203ENST00000370819 GOLGA2Q08379 1002 aa9.78□□□□□ -0.84
COL21A1-203ENST00000370819 RAPGEF2Q9Y4G8 1499 aa9.78□□□□□ -0.84
COL21A1-203ENST00000370819 PLIN1O60240 522 aa9.78□□□□□ -0.84
COL21A1-203ENST00000370819 PDE4AP27815 886 aa9.78□□□□□ -0.84
COL21A1-203ENST00000370819 FGD1P98174 961 aa9.78□□□□□ -0.84
COL21A1-203ENST00000370819 OS9Q13438 667 aaPredicted RBP9.78□□□□□ -0.84
COL21A1-203ENST00000370819 RWDD1Q9H446 243 aaPredicted RBP9.78□□□□□ -0.84
COL21A1-203ENST00000370819 MFAP1P55081 439 aaKnown RBP9.77□□□□□ -0.84
COL21A1-203ENST00000370819 CCDC146Q8IYE0 955 aa9.77□□□□□ -0.84
COL21A1-203ENST00000370819 EXOC6Q8TAG9 804 aa9.77□□□□□ -0.84
COL21A1-203ENST00000370819 ARID3AQ99856 593 aa9.77□□□□□ -0.84
COL21A1-203ENST00000370819 ITPRIPQ8IWB1 547 aa9.77□□□□□ -0.85
COL21A1-203ENST00000370819 GOLGA6L4A6NEF3 574 aa9.77□□□□□ -0.85
COL21A1-203ENST00000370819 GBP4Q96PP9 640 aa9.77□□□□□ -0.85
COL21A1-203ENST00000370819 PDE3BQ13370 1112 aa9.76□□□□□ -0.85
COL21A1-203ENST00000370819 ST20-MTHFSA0A0A6YYL1 179 aa9.76□□□□□ -0.85
COL21A1-203ENST00000370819 FANCIQ9NVI1 1328 aa9.76□□□□□ -0.85
COL21A1-203ENST00000370819 GOLGA6L3A6NEY3 463 aa9.75□□□□□ -0.85
COL21A1-203ENST00000370819 IPO8O15397 1037 aaKnown RBP9.75□□□□□ -0.85
COL21A1-203ENST00000370819 TDRD9Q8NDG6 1382 aaKnown RBP9.75□□□□□ -0.85
COL21A1-203ENST00000370819 STK26Q9P289 416 aa9.75□□□□□ -0.85
COL21A1-203ENST00000370819 NAP1L2Q9ULW6 460 aaPredicted RBP9.75□□□□□ -0.85
COL21A1-203ENST00000370819 LMOD2Q6P5Q4 547 aa9.75□□□□□ -0.85
COL21A1-203ENST00000370819 FHOD3Q2V2M9 1422 aa9.75□□□□□ -0.85
COL21A1-203ENST00000370819 CDK11BP21127 795 aaKnown RBP9.74□□□□□ -0.85
COL21A1-203ENST00000370819 ZBED9Q6R2W3 1325 aa9.74□□□□□ -0.85
COL21A1-203ENST00000370819 USP35Q9P2H5 1018 aa9.73□□□□□ -0.85
COL21A1-203ENST00000370819 CHAF1AQ13111 956 aaPredicted RBP9.73□□□□□ -0.85
COL21A1-203ENST00000370819 FOXD4L1Q9NU39 408 aa9.73□□□□□ -0.85
COL21A1-203ENST00000370819 SMC4Q9NTJ3 1288 aa9.73□□□□□ -0.85
COL21A1-203ENST00000370819 GGT6Q6P531 493 aa9.72□□□□□ -0.85
COL21A1-203ENST00000370819 PMFBP1Q8TBY8 1022 aa9.72□□□□□ -0.85
COL21A1-203ENST00000370819 MCCP23508 829 aa9.72□□□□□ -0.85
COL21A1-203ENST00000370819 RRP1P56182 461 aaKnown RBP9.72□□□□□ -0.85
COL21A1-203ENST00000370819 CENPJQ9HC77 1338 aaPredicted RBP9.72□□□□□ -0.85
COL21A1-203ENST00000370819 GSE1Q14687 1217 aa9.71□□□□□ -0.85
COL21A1-203ENST00000370819 CRBNQ96SW2 442 aa9.71□□□□□ -0.86
COL21A1-203ENST00000370819 BCL2L13Q9BXK5 485 aa9.71□□□□□ -0.86
COL21A1-203ENST00000370819 ANKRD30AQ9BXX3 1397 aa9.71□□□□□ -0.86
COL21A1-203ENST00000370819 DRC7Q8IY82 874 aa9.71□□□□□ -0.86
COL21A1-203ENST00000370819 MYBBP1AQ9BQG0 1328 aaKnown RBP9.7□□□□□ -0.86
COL21A1-203ENST00000370819 RRP7AQ9Y3A4 280 aaKnown RBP9.7□□□□□ -0.86
COL21A1-203ENST00000370819 KANK1Q14678 1352 aa9.7□□□□□ -0.86
COL21A1-203ENST00000370819 NRDCO43847 1150 aa9.7□□□□□ -0.86
COL21A1-203ENST00000370819 FAM161AQ3B820 660 aa9.7□□□□□ -0.86
COL21A1-203ENST00000370819 PANK3Q9H999 370 aa9.7□□□□□ -0.86
COL21A1-203ENST00000370819 HNRNPMP52272 730 aaKnown RBP eCLIP9.69□□□□□ -0.86
COL21A1-203ENST00000370819 CENPQQ7L2Z9 268 aaPredicted RBP9.69□□□□□ -0.86
COL21A1-203ENST00000370819 HAP1P54257 671 aaPredicted RBP9.69□□□□□ -0.86
COL21A1-203ENST00000370819 KIAA2012Q0VF49 1180 aa9.69□□□□□ -0.86
COL21A1-203ENST00000370819 KIF15Q9NS87 1388 aa9.68□□□□□ -0.86
COL21A1-203ENST00000370819 CALD1Q05682 793 aaKnown RBP9.68□□□□□ -0.86
COL21A1-203ENST00000370819 CFAP44Q96MT7 982 aa9.68□□□□□ -0.86
COL21A1-203ENST00000370819 GOLGA6L6A8MZA4 724 aa9.68□□□□□ -0.86
COL21A1-203ENST00000370819 AMER1Q5JTC6 1135 aaPredicted RBP9.67□□□□□ -0.86
COL21A1-203ENST00000370819 COG6Q9Y2V7 657 aa9.67□□□□□ -0.86
COL21A1-203ENST00000370819 KIAA1211Q6ZU35 1233 aa9.67□□□□□ -0.86
COL21A1-203ENST00000370819 HDGFL2Q7Z4V5 671 aaPredicted RBP9.67□□□□□ -0.86
COL21A1-203ENST00000370819 RTF1Q92541 710 aaKnown RBP9.67□□□□□ -0.86
COL21A1-203ENST00000370819 MLECQ14165 292 aa9.66□□□□□ -0.86
COL21A1-203ENST00000370819 PRDM2Q13029 1718 aa9.66□□□□□ -0.86
COL21A1-203ENST00000370819 NOL8Q76FK4 1167 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms