RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 CDK13Q14004 1512 aaKnown RBP25.01■■□□□ 1.59
RPF1-202ENST00000370656 HECW1Q76N89 1606 aa25.01■■□□□ 1.59
RPF1-202ENST00000370656 SIGLEC1Q9BZZ2 1709 aa25■■□□□ 1.59
RPF1-202ENST00000370656 PLCH2O75038 1416 aa24.99■■□□□ 1.59
RPF1-202ENST00000370656 SCAPERQ9BY12 1400 aa24.98■■□□□ 1.59
RPF1-202ENST00000370656 MLECQ14165 292 aa24.97■■□□□ 1.59
RPF1-202ENST00000370656 MYO5CQ9NQX4 1742 aa24.96■■□□□ 1.59
RPF1-202ENST00000370656 CERKQ8TCT0 537 aa24.94■■□□□ 1.58
RPF1-202ENST00000370656 CDK11AQ9UQ88 783 aaPredicted RBP24.94■■□□□ 1.58
RPF1-202ENST00000370656 FMN1Q68DA7 1419 aa24.94■■□□□ 1.58
RPF1-202ENST00000370656 EFCAB2Q5VUJ9 269 aa24.93■■□□□ 1.58
RPF1-202ENST00000370656 ATP1B4Q9UN42 357 aaPredicted RBP24.93■■□□□ 1.58
RPF1-202ENST00000370656 ATP10AO60312 1499 aa24.92■■□□□ 1.58
RPF1-202ENST00000370656 C9orf84Q5VXU9 1444 aa24.9■■□□□ 1.58
RPF1-202ENST00000370656 UBTFP17480 764 aaKnown RBP24.89■■□□□ 1.58
RPF1-202ENST00000370656 PREX1Q8TCU6 1659 aa24.88■■□□□ 1.57
RPF1-202ENST00000370656 ARHGEF12Q9NZN5 1544 aa24.87■■□□□ 1.57
RPF1-202ENST00000370656 KIF14Q15058 1648 aa24.86■■□□□ 1.57
RPF1-202ENST00000370656 ZNF518AQ6AHZ1 1483 aa24.84■■□□□ 1.57
RPF1-202ENST00000370656 POTEDQ86YR6 584 aa24.83■■□□□ 1.57
RPF1-202ENST00000370656 CLIP1P30622 1438 aa24.82■■□□□ 1.56
RPF1-202ENST00000370656 ARHGAP5Q13017 1502 aa24.81■■□□□ 1.56
RPF1-202ENST00000370656 DISP3Q9P2K9 1392 aa24.81■■□□□ 1.56
RPF1-202ENST00000370656 TROQ12816 1431 aaPredicted RBP24.8■■□□□ 1.56
RPF1-202ENST00000370656 EHMT2Q96KQ7 1210 aa24.8■■□□□ 1.56
RPF1-202ENST00000370656 MYT1LQ9UL68 1186 aa24.8■■□□□ 1.56
RPF1-202ENST00000370656 ARHGAP35Q9NRY4 1499 aa24.8■■□□□ 1.56
RPF1-202ENST00000370656 SETD1BQ9UPS6 1966 aaKnown RBP24.78■■□□□ 1.56
RPF1-202ENST00000370656 KDM5CP41229 1560 aa24.78■■□□□ 1.56
RPF1-202ENST00000370656 DMRT2Q9Y5R5 561 aa24.76■■□□□ 1.55
RPF1-202ENST00000370656 STRCQ7RTU9 1775 aa24.75■■□□□ 1.55
RPF1-202ENST00000370656 CEBPAP49715 358 aaPredicted RBP24.75■■□□□ 1.55
RPF1-202ENST00000370656 AFAP1Q8N556 730 aa24.75■■□□□ 1.55
RPF1-202ENST00000370656 ILDR2Q71H61 639 aa24.74■■□□□ 1.55
RPF1-202ENST00000370656 UHRF1BP1Q6BDS2 1440 aa24.73■■□□□ 1.55
RPF1-202ENST00000370656 LRRIQ1Q96JM4 1722 aa24.72■■□□□ 1.55
RPF1-202ENST00000370656 CDC42BPBQ9Y5S2 1711 aa24.72■■□□□ 1.55
RPF1-202ENST00000370656 REREQ9P2R6 1566 aa24.71■■□□□ 1.55
RPF1-202ENST00000370656 DIP2CQ9Y2E4 1556 aa24.71■■□□□ 1.55
RPF1-202ENST00000370656 SPATA31D1Q6ZQQ2 1576 aa24.69■■□□□ 1.54
RPF1-202ENST00000370656 ESF1Q9H501 851 aaKnown RBP24.69■■□□□ 1.54
RPF1-202ENST00000370656 SOCS7O14512 581 aa24.68■■□□□ 1.54
RPF1-202ENST00000370656 MLH3Q9UHC1 1453 aa24.68■■□□□ 1.54
RPF1-202ENST00000370656 PREX2Q70Z35 1606 aa24.67■■□□□ 1.54
RPF1-202ENST00000370656 ABCA6Q8N139 1617 aa24.67■■□□□ 1.54
RPF1-202ENST00000370656 C3P01024 1663 aa24.66■■□□□ 1.54
RPF1-202ENST00000370656 CCDC18Q5T9S5 1454 aa24.64■■□□□ 1.54
RPF1-202ENST00000370656 ITSN2Q9NZM3 1697 aa24.63■■□□□ 1.53
RPF1-202ENST00000370656 ABCC1P33527 1531 aa24.63■■□□□ 1.53
RPF1-202ENST00000370656 AGLP35573 1532 aa24.63■■□□□ 1.53
RPF1-202ENST00000370656 CASKIN1Q8WXD9 1431 aa24.59■■□□□ 1.53
RPF1-202ENST00000370656 TRAPPC8Q9Y2L5 1435 aa24.59■■□□□ 1.53
RPF1-202ENST00000370656 PTPRTO14522 1441 aa24.58■■□□□ 1.53
RPF1-202ENST00000370656 CDC42BPAQ5VT25 1732 aa24.58■■□□□ 1.52
RPF1-202ENST00000370656 CNTLNQ9NXG0 1405 aa24.57■■□□□ 1.52
RPF1-202ENST00000370656 KIDINS220Q9ULH0 1771 aa24.57■■□□□ 1.52
RPF1-202ENST00000370656 MSH5O43196 834 aa24.54■■□□□ 1.52
RPF1-202ENST00000370656 FYCO1Q9BQS8 1478 aa24.5■■□□□ 1.51
RPF1-202ENST00000370656 MROH2AA6NES4 1674 aa24.5■■□□□ 1.51
RPF1-202ENST00000370656 LTBP4Q8N2S1 1624 aa24.49■■□□□ 1.51
RPF1-202ENST00000370656 SAMD9LQ8IVG5 1584 aa24.48■■□□□ 1.51
RPF1-202ENST00000370656 ZNF777Q9ULD5 760 aaPredicted RBP24.48■■□□□ 1.51
RPF1-202ENST00000370656 NPATQ14207 1427 aa24.46■■□□□ 1.51
RPF1-202ENST00000370656 NCOA1Q15788 1441 aa24.45■■□□□ 1.51
RPF1-202ENST00000370656 SUPT6HQ7KZ85 1726 aaKnown RBP24.44■■□□□ 1.5
RPF1-202ENST00000370656 SPAG9O60271 1321 aaKnown RBP24.44■■□□□ 1.5
RPF1-202ENST00000370656 SYCP2Q9BX26 1530 aa24.44■■□□□ 1.5
RPF1-202ENST00000370656 IQSEC2Q5JU85 1478 aa24.44■■□□□ 1.5
RPF1-202ENST00000370656 CAMSAP1Q5T5Y3 1602 aa24.41■■□□□ 1.5
RPF1-202ENST00000370656 ZMYM3Q14202 1370 aa24.41■■□□□ 1.5
RPF1-202ENST00000370656 GPATCH8Q9UKJ3 1502 aaKnown RBP24.4■■□□□ 1.5
RPF1-202ENST00000370656 PLEKHH2Q8IVE3 1493 aa24.4■■□□□ 1.5
RPF1-202ENST00000370656 ATP7AQ04656 1500 aa24.4■■□□□ 1.5
RPF1-202ENST00000370656 HNRNPMP52272 730 aaKnown RBP eCLIP24.39■■□□□ 1.49
RPF1-202ENST00000370656 CLTCQ00610 1675 aaKnown RBP24.37■■□□□ 1.49
RPF1-202ENST00000370656 KIAA1107Q9UPP5 1409 aa24.37■■□□□ 1.49
RPF1-202ENST00000370656 CFDP1Q9UEE9 299 aaPredicted RBP24.37■■□□□ 1.49
RPF1-202ENST00000370656 INO80Q9ULG1 1556 aaPredicted RBP24.35■■□□□ 1.49
RPF1-202ENST00000370656 CCNB3Q8WWL7 1395 aa24.35■■□□□ 1.49
RPF1-202ENST00000370656 PLXNC1O60486 1568 aa24.34■■□□□ 1.49
RPF1-202ENST00000370656 A2MP01023 1474 aa24.34■■□□□ 1.49
RPF1-202ENST00000370656 ZNF142P52746 1687 aaPredicted RBP24.34■■□□□ 1.49
RPF1-202ENST00000370656 MYO3AQ8NEV4 1616 aa24.32■■□□□ 1.48
RPF1-202ENST00000370656 ADGBQ8N7X0 1667 aa24.31■■□□□ 1.48
RPF1-202ENST00000370656 PKD2Q13563 968 aa24.3■■□□□ 1.48
RPF1-202ENST00000370656 PLA2R1Q13018 1463 aa24.3■■□□□ 1.48
RPF1-202ENST00000370656 NCKAP5LQ9HCH0 1330 aa24.3■■□□□ 1.48
RPF1-202ENST00000370656 MTUS2Q5JR59 1369 aa24.29■■□□□ 1.48
RPF1-202ENST00000370656 GGT6Q6P531 493 aa24.29■■□□□ 1.48
RPF1-202ENST00000370656 PPP6R1Q9UPN7 881 aa24.29■■□□□ 1.48
RPF1-202ENST00000370656 CEP170BQ9Y4F5 1589 aaPredicted RBP24.29■■□□□ 1.48
RPF1-202ENST00000370656 UBAP1LF5GYI3 381 aa24.27■■□□□ 1.48
RPF1-202ENST00000370656 ZNF335Q9H4Z2 1342 aaPredicted RBP24.27■■□□□ 1.48
RPF1-202ENST00000370656 PTPRKQ15262 1439 aa24.27■■□□□ 1.48
RPF1-202ENST00000370656 PIAS4Q8N2W9 510 aaPredicted RBP24.25■■□□□ 1.47
RPF1-202ENST00000370656 TCOF1Q13428 1488 aaKnown RBP24.23■■□□□ 1.47
RPF1-202ENST00000370656 TIAM1Q13009 1591 aa24.19■■□□□ 1.46
RPF1-202ENST00000370656 EHBP1L1Q8N3D4 1523 aa24.18■■□□□ 1.46
RPF1-202ENST00000370656 A2ML1A8K2U0 1454 aa24.18■■□□□ 1.46
RPF1-202ENST00000370656 RTEL1-TNFRSF6BF6WH68 1400 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms