RNA–Protein interactions for RNA: ENST00000370500.9

GTF2B-201, Transcript of general transcription factor IIB, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2B, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-201ENST00000370500 KIF13AQ9H1H9 1805 aa15.49■□□□□ 0.07
GTF2B-201ENST00000370500 ABCA8O94911 1581 aa15.49■□□□□ 0.07
GTF2B-201ENST00000370500 C19orf67A6NJJ6 358 aa15.49■□□□□ 0.07
GTF2B-201ENST00000370500 P3H3Q8IVL6 736 aa15.49■□□□□ 0.07
GTF2B-201ENST00000370500 EFCAB5A4FU69 1503 aa15.45■□□□□ 0.06
GTF2B-201ENST00000370500 GLI2P10070 1586 aa15.45■□□□□ 0.06
GTF2B-201ENST00000370500 ZCCHC11Q5TAX3 1644 aaKnown RBP15.44■□□□□ 0.06
GTF2B-201ENST00000370500 CHADLQ6NUI6 762 aa15.43■□□□□ 0.06
GTF2B-201ENST00000370500 RANGAP1P46060 587 aaPredicted RBP15.42■□□□□ 0.06
GTF2B-201ENST00000370500 WDR7Q9Y4E6 1490 aa15.41■□□□□ 0.06
GTF2B-201ENST00000370500 EPRSP07814 1512 aaKnown RBP15.41■□□□□ 0.06
GTF2B-201ENST00000370500 FHOD3Q2V2M9 1422 aa15.38■□□□□ 0.05
GTF2B-201ENST00000370500 ATP10BO94823 1461 aa15.38■□□□□ 0.05
GTF2B-201ENST00000370500 EHMT2Q96KQ7 1210 aa15.36■□□□□ 0.05
GTF2B-201ENST00000370500 RAPGEF6Q8TEU7 1601 aa15.36■□□□□ 0.05
GTF2B-201ENST00000370500 KCNH8Q96L42 1107 aa15.35■□□□□ 0.05
GTF2B-201ENST00000370500 FMN1Q68DA7 1419 aa15.34■□□□□ 0.05
GTF2B-201ENST00000370500 TEX14Q8IWB6 1497 aa15.33■□□□□ 0.05
GTF2B-201ENST00000370500 NUP153P49790 1475 aaKnown RBP15.33■□□□□ 0.04
GTF2B-201ENST00000370500 MAP3K4Q9Y6R4 1608 aa15.32■□□□□ 0.04
GTF2B-201ENST00000370500 ARHGAP35Q9NRY4 1499 aa15.32■□□□□ 0.04
GTF2B-201ENST00000370500 PLEKHD1A6NEE1 506 aa15.31■□□□□ 0.04
GTF2B-201ENST00000370500 CD109Q6YHK3 1445 aa15.31■□□□□ 0.04
GTF2B-201ENST00000370500 ARID3CA6NKF2 412 aa15.3■□□□□ 0.04
GTF2B-201ENST00000370500 TSPOAP1O95153 1857 aa15.3■□□□□ 0.04
GTF2B-201ENST00000370500 MAGI3Q5TCQ9 1506 aa15.29■□□□□ 0.04
GTF2B-201ENST00000370500 KDM6BO15054 1643 aa15.29■□□□□ 0.04
GTF2B-201ENST00000370500 GABBR2O75899 941 aa15.28■□□□□ 0.04
GTF2B-201ENST00000370500 CFAP43Q8NDM7 1665 aa15.27■□□□□ 0.03
GTF2B-201ENST00000370500 PPRC1Q5VV67 1664 aaKnown RBP15.26■□□□□ 0.03
GTF2B-201ENST00000370500 CDK11AQ9UQ88 783 aaPredicted RBP15.25■□□□□ 0.03
GTF2B-201ENST00000370500 PHLDB1Q86UU1 1377 aa15.25■□□□□ 0.03
GTF2B-201ENST00000370500 FARP1Q9Y4F1 1045 aaPredicted RBP15.24■□□□□ 0.03
GTF2B-201ENST00000370500 ATP1B4Q9UN42 357 aaPredicted RBP15.23■□□□□ 0.03
GTF2B-201ENST00000370500 ABCA9Q8IUA7 1624 aa15.22■□□□□ 0.03
GTF2B-201ENST00000370500 CLIP1P30622 1438 aa15.21■□□□□ 0.03
GTF2B-201ENST00000370500 STAG3Q9UJ98 1225 aa15.21■□□□□ 0.02
GTF2B-201ENST00000370500 HECW1Q76N89 1606 aa15.21■□□□□ 0.02
GTF2B-201ENST00000370500 COL17A1Q9UMD9 1497 aaPredicted RBP15.19■□□□□ 0.02
GTF2B-201ENST00000370500 CD44P16070 742 aaKnown RBP15.19■□□□□ 0.02
GTF2B-201ENST00000370500 CASKIN1Q8WXD9 1431 aa15.18■□□□□ 0.02
GTF2B-201ENST00000370500 NEO1Q92859 1461 aa15.17■□□□□ 0.02
GTF2B-201ENST00000370500 ARAP3Q8WWN8 1544 aa15.16■□□□□ 0.02
GTF2B-201ENST00000370500 CDK13Q14004 1512 aaKnown RBP15.16■□□□□ 0.02
GTF2B-201ENST00000370500 CCDC18Q5T9S5 1454 aa15.14■□□□□ 0.01
GTF2B-201ENST00000370500 SPDYE4A6NLX3 237 aa15.13■□□□□ 0.01
GTF2B-201ENST00000370500 FYCO1Q9BQS8 1478 aa15.13■□□□□ 0.01
GTF2B-201ENST00000370500 CLCN6P51797 869 aa15.12■□□□□ 0.01
GTF2B-201ENST00000370500 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.12■□□□□ 0.01
GTF2B-201ENST00000370500 TROQ12816 1431 aaPredicted RBP15.12■□□□□ 0.01
GTF2B-201ENST00000370500 PLCH2O75038 1416 aa15.09■□□□□ 0.01
GTF2B-201ENST00000370500 CEP162Q5TB80 1403 aa15.09■□□□□ 0.01
GTF2B-201ENST00000370500 FANCAO15360 1455 aa15.08■□□□□ 0
GTF2B-201ENST00000370500 AKNAQ7Z591 1439 aa15.08■□□□□ 0
GTF2B-201ENST00000370500 PCF11O94913 1555 aaKnown RBP15.07■□□□□ 0
GTF2B-201ENST00000370500 EFCAB2Q5VUJ9 269 aa15.07■□□□□ 0
GTF2B-201ENST00000370500 CFAP74Q9C0B2 1584 aa15.07■□□□□ 0
GTF2B-201ENST00000370500 LOC105371045A0A1W2PR82 267 aa15.06■□□□□ 0
GTF2B-201ENST00000370500 TTC37Q6PGP7 1564 aa15.05■□□□□ -0
GTF2B-201ENST00000370500 KIF14Q15058 1648 aa15.05■□□□□ -0
GTF2B-201ENST00000370500 RAPGEF3O95398 923 aa15.04■□□□□ -0
GTF2B-201ENST00000370500 CREBZFQ9NS37 354 aa15.04■□□□□ -0
GTF2B-201ENST00000370500 DENND4BO75064 1496 aaPredicted RBP15.04■□□□□ -0
GTF2B-201ENST00000370500 KDM4FA0A1W2PPD8 638 aa15.03■□□□□ -0
GTF2B-201ENST00000370500 LRRIQ1Q96JM4 1722 aa15.02□□□□□ -0.01
GTF2B-201ENST00000370500 LHX8Q68G74 356 aa15□□□□□ -0.01
GTF2B-201ENST00000370500 ADGRL1O94910 1474 aa14.99□□□□□ -0.01
GTF2B-201ENST00000370500 SCAPERQ9BY12 1400 aa14.98□□□□□ -0.01
GTF2B-201ENST00000370500 MYO5CQ9NQX4 1742 aa14.98□□□□□ -0.01
GTF2B-201ENST00000370500 MAGI2Q86UL8 1455 aa14.98□□□□□ -0.01
GTF2B-201ENST00000370500 MTUS2Q5JR59 1369 aa14.97□□□□□ -0.01
GTF2B-201ENST00000370500 ARHGAP5Q13017 1502 aa14.96□□□□□ -0.01
GTF2B-201ENST00000370500 ZNF579Q8NAF0 562 aaKnown RBP14.96□□□□□ -0.02
GTF2B-201ENST00000370500 ZRANB1Q9UGI0 708 aa14.96□□□□□ -0.02
GTF2B-201ENST00000370500 FRMPD1Q5SYB0 1578 aa14.95□□□□□ -0.02
GTF2B-201ENST00000370500 POGZQ7Z3K3 1410 aa14.94□□□□□ -0.02
GTF2B-201ENST00000370500 VPS8Q8N3P4 1428 aa14.94□□□□□ -0.02
GTF2B-201ENST00000370500 ZMYM4Q5VZL5 1548 aa14.94□□□□□ -0.02
GTF2B-201ENST00000370500 RICTORQ6R327 1708 aa14.93□□□□□ -0.02
GTF2B-201ENST00000370500 ZNF518AQ6AHZ1 1483 aa14.92□□□□□ -0.02
GTF2B-201ENST00000370500 DCBLD2Q96PD2 775 aa14.91□□□□□ -0.02
GTF2B-201ENST00000370500 CCNB3Q8WWL7 1395 aa14.91□□□□□ -0.02
GTF2B-201ENST00000370500 GPATCH8Q9UKJ3 1502 aaKnown RBP14.91□□□□□ -0.02
GTF2B-201ENST00000370500 PREX2Q70Z35 1606 aa14.91□□□□□ -0.02
GTF2B-201ENST00000370500 CFDP1Q9UEE9 299 aaPredicted RBP14.9□□□□□ -0.02
GTF2B-201ENST00000370500 CDC42BPBQ9Y5S2 1711 aa14.89□□□□□ -0.03
GTF2B-201ENST00000370500 EHBP1L1Q8N3D4 1523 aa14.89□□□□□ -0.03
GTF2B-201ENST00000370500 PAK3O75914 559 aaPredicted RBP14.89□□□□□ -0.03
GTF2B-201ENST00000370500 POTEIP0CG38 1075 aa14.89□□□□□ -0.03
GTF2B-201ENST00000370500 ZFYVE16Q7Z3T8 1539 aa14.89□□□□□ -0.03
GTF2B-201ENST00000370500 ARHGEF40Q8TER5 1519 aa14.89□□□□□ -0.03
GTF2B-201ENST00000370500 ARID4BQ4LE39 1312 aaPredicted RBP14.88□□□□□ -0.03
GTF2B-201ENST00000370500 AFAP1Q8N556 730 aa14.88□□□□□ -0.03
GTF2B-201ENST00000370500 MAP3K1Q13233 1512 aa14.88□□□□□ -0.03
GTF2B-201ENST00000370500 PLEKHH2Q8IVE3 1493 aa14.88□□□□□ -0.03
GTF2B-201ENST00000370500 KIAA1107Q9UPP5 1409 aa14.87□□□□□ -0.03
GTF2B-201ENST00000370500 CDC42BPAQ5VT25 1732 aa14.87□□□□□ -0.03
GTF2B-201ENST00000370500 ZNF777Q9ULD5 760 aaPredicted RBP14.86□□□□□ -0.03
GTF2B-201ENST00000370500 ATP10AO60312 1499 aa14.86□□□□□ -0.03
GTF2B-201ENST00000370500 KDM5CP41229 1560 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms