RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 GPATCH8Q9UKJ3 1502 aaKnown RBP14.4□□□□□ -0.1
PRPF38B-203ENST00000370025 ANP32EQ9BTT0 268 aa14.39□□□□□ -0.11
PRPF38B-203ENST00000370025 RRP7BPQ9NSQ0 103 aa14.39□□□□□ -0.11
PRPF38B-203ENST00000370025 AKNAQ7Z591 1439 aa14.39□□□□□ -0.11
PRPF38B-203ENST00000370025 MAPKBP1O60336 1514 aa14.39□□□□□ -0.11
PRPF38B-203ENST00000370025 ZNF644Q9H582 1327 aaPredicted RBP14.38□□□□□ -0.11
PRPF38B-203ENST00000370025 DAPK1P53355 1430 aa14.38□□□□□ -0.11
PRPF38B-203ENST00000370025 ABCC2Q92887 1545 aa14.37□□□□□ -0.11
PRPF38B-203ENST00000370025 DNMT1P26358 1616 aaKnown RBP14.37□□□□□ -0.11
PRPF38B-203ENST00000370025 ZNF777Q9ULD5 760 aaPredicted RBP14.37□□□□□ -0.11
PRPF38B-203ENST00000370025 BCANQ96GW7 911 aa14.36□□□□□ -0.11
PRPF38B-203ENST00000370025 CAMSAP2Q08AD1 1489 aa14.36□□□□□ -0.11
PRPF38B-203ENST00000370025 GCC2Q8IWJ2 1684 aa14.36□□□□□ -0.11
PRPF38B-203ENST00000370025 ABCC5O15440 1437 aa14.35□□□□□ -0.11
PRPF38B-203ENST00000370025 ABCC10Q5T3U5 1492 aa14.35□□□□□ -0.11
PRPF38B-203ENST00000370025 ROCK1Q13464 1354 aa14.35□□□□□ -0.11
PRPF38B-203ENST00000370025 CDC42BPAQ5VT25 1732 aa14.33□□□□□ -0.11
PRPF38B-203ENST00000370025 UHRF1BP1LA0JNW5 1464 aa14.32□□□□□ -0.12
PRPF38B-203ENST00000370025 OSCARQ8IYS5 282 aa14.31□□□□□ -0.12
PRPF38B-203ENST00000370025 TRIM52Q96A61 297 aa14.31□□□□□ -0.12
PRPF38B-203ENST00000370025 TIMELESSQ9UNS1 1208 aa14.3□□□□□ -0.12
PRPF38B-203ENST00000370025 SUPT16HQ9Y5B9 1047 aaKnown RBP14.3□□□□□ -0.12
PRPF38B-203ENST00000370025 SIN3AQ96ST3 1273 aa14.3□□□□□ -0.12
PRPF38B-203ENST00000370025 TSHZ2Q9NRE2 1034 aa14.29□□□□□ -0.12
PRPF38B-203ENST00000370025 KDM5BQ9UGL1 1544 aa14.27□□□□□ -0.13
PRPF38B-203ENST00000370025 ZCCHC11Q5TAX3 1644 aaKnown RBP14.26□□□□□ -0.13
PRPF38B-203ENST00000370025 ADGBQ8N7X0 1667 aa14.26□□□□□ -0.13
PRPF38B-203ENST00000370025 ANKRD30AQ9BXX3 1397 aa14.25□□□□□ -0.13
PRPF38B-203ENST00000370025 KDM6BO15054 1643 aa14.25□□□□□ -0.13
PRPF38B-203ENST00000370025 CROCC2H7BZ55 1655 aa14.25□□□□□ -0.13
PRPF38B-203ENST00000370025 TSPY4P0CV99 314 aa14.25□□□□□ -0.13
PRPF38B-203ENST00000370025 TSPY10P0CW01 314 aa14.25□□□□□ -0.13
PRPF38B-203ENST00000370025 KCNH8Q96L42 1107 aa14.25□□□□□ -0.13
PRPF38B-203ENST00000370025 PREX2Q70Z35 1606 aa14.25□□□□□ -0.13
PRPF38B-203ENST00000370025 NCOA1Q15788 1441 aa14.25□□□□□ -0.13
PRPF38B-203ENST00000370025 ADGRL2O95490 1459 aa14.24□□□□□ -0.13
PRPF38B-203ENST00000370025 CDC42BPBQ9Y5S2 1711 aa14.23□□□□□ -0.13
PRPF38B-203ENST00000370025 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.23□□□□□ -0.13
PRPF38B-203ENST00000370025 RSPH4AQ5TD94 716 aa14.23□□□□□ -0.13
PRPF38B-203ENST00000370025 MPHOSPH9Q99550 1183 aa14.22□□□□□ -0.13
PRPF38B-203ENST00000370025 SHANK2Q9UPX8 1470 aa14.22□□□□□ -0.13
PRPF38B-203ENST00000370025 HNRNPMP52272 730 aaKnown RBP eCLIP14.22□□□□□ -0.13
PRPF38B-203ENST00000370025 TTC37Q6PGP7 1564 aa14.22□□□□□ -0.13
PRPF38B-203ENST00000370025 ARHGAP5Q13017 1502 aa14.21□□□□□ -0.13
PRPF38B-203ENST00000370025 ARHGEF5Q12774 1597 aa14.21□□□□□ -0.13
PRPF38B-203ENST00000370025 TONSLQ96HA7 1378 aa14.21□□□□□ -0.13
PRPF38B-203ENST00000370025 C9orf84Q5VXU9 1444 aa14.21□□□□□ -0.13
PRPF38B-203ENST00000370025 MYO5CQ9NQX4 1742 aa14.21□□□□□ -0.14
PRPF38B-203ENST00000370025 SAMD9LQ8IVG5 1584 aa14.2□□□□□ -0.14
PRPF38B-203ENST00000370025 MBD5Q9P267 1494 aa14.19□□□□□ -0.14
PRPF38B-203ENST00000370025 CCDC141Q6ZP82 1450 aa14.18□□□□□ -0.14
PRPF38B-203ENST00000370025 PLEKHH2Q8IVE3 1493 aa14.18□□□□□ -0.14
PRPF38B-203ENST00000370025 PPP1R15AO75807 674 aaPredicted RBP14.18□□□□□ -0.14
PRPF38B-203ENST00000370025 SLC4A1APQ9BWU0 796 aaKnown RBP14.17□□□□□ -0.14
PRPF38B-203ENST00000370025 ANKRD50Q9ULJ7 1429 aa14.17□□□□□ -0.14
PRPF38B-203ENST00000370025 PLCH2O75038 1416 aa14.16□□□□□ -0.14
PRPF38B-203ENST00000370025 EFCAB2Q5VUJ9 269 aa14.16□□□□□ -0.14
PRPF38B-203ENST00000370025 DENND4BO75064 1496 aaPredicted RBP14.15□□□□□ -0.14
PRPF38B-203ENST00000370025 KIAA1107Q9UPP5 1409 aa14.15□□□□□ -0.14
PRPF38B-203ENST00000370025 NPM1P06748 294 aaKnown RBP eCLIP14.15□□□□□ -0.14
PRPF38B-203ENST00000370025 SYCP2Q9BX26 1530 aa14.14□□□□□ -0.15
PRPF38B-203ENST00000370025 WDR7Q9Y4E6 1490 aa14.14□□□□□ -0.15
PRPF38B-203ENST00000370025 PRKCSHP14314 528 aaPredicted RBP14.14□□□□□ -0.15
PRPF38B-203ENST00000370025 KIF15Q9NS87 1388 aa14.13□□□□□ -0.15
PRPF38B-203ENST00000370025 FOXD1Q16676 465 aa14.11□□□□□ -0.15
PRPF38B-203ENST00000370025 MAST1Q9Y2H9 1570 aa14.1□□□□□ -0.15
PRPF38B-203ENST00000370025 PZPP20742 1482 aa14.1□□□□□ -0.15
PRPF38B-203ENST00000370025 ANKRD30BQ9BXX2 1392 aa14.1□□□□□ -0.15
PRPF38B-203ENST00000370025 ARAP3Q8WWN8 1544 aa14.1□□□□□ -0.15
PRPF38B-203ENST00000370025 ASXL2Q76L83 1435 aa14.09□□□□□ -0.15
PRPF38B-203ENST00000370025 NUP155O75694 1391 aa14.08□□□□□ -0.15
PRPF38B-203ENST00000370025 PKD2Q13563 968 aa14.06□□□□□ -0.16
PRPF38B-203ENST00000370025 ABCC1P33527 1531 aa14.06□□□□□ -0.16
PRPF38B-203ENST00000370025 ARHGEF12Q9NZN5 1544 aa14.06□□□□□ -0.16
PRPF38B-203ENST00000370025 ABCA9Q8IUA7 1624 aa14.06□□□□□ -0.16
PRPF38B-203ENST00000370025 RPRD2Q5VT52 1461 aaKnown RBP14.05□□□□□ -0.16
PRPF38B-203ENST00000370025 PLXNC1O60486 1568 aa14.04□□□□□ -0.16
PRPF38B-203ENST00000370025 FKBP8Q14318 412 aa14.04□□□□□ -0.16
PRPF38B-203ENST00000370025 KDM5DQ9BY66 1539 aa14.04□□□□□ -0.16
PRPF38B-203ENST00000370025 L3MBTL2Q969R5 705 aa14.03□□□□□ -0.16
PRPF38B-203ENST00000370025 FANCAO15360 1455 aa14.03□□□□□ -0.16
PRPF38B-203ENST00000370025 TRAPPC8Q9Y2L5 1435 aa14.02□□□□□ -0.16
PRPF38B-203ENST00000370025 DUOX2Q9NRD8 1548 aa14.02□□□□□ -0.17
PRPF38B-203ENST00000370025 SPAG9O60271 1321 aaKnown RBP14.01□□□□□ -0.17
PRPF38B-203ENST00000370025 CNGB1Q14028 1251 aaPredicted RBP14.01□□□□□ -0.17
PRPF38B-203ENST00000370025 RTEL1-TNFRSF6BF6WH68 1400 aa13.99□□□□□ -0.17
PRPF38B-203ENST00000370025 AFAP1Q8N556 730 aa13.99□□□□□ -0.17
PRPF38B-203ENST00000370025 ERBINQ96RT1 1412 aa13.98□□□□□ -0.17
PRPF38B-203ENST00000370025 RBM19Q9Y4C8 960 aaKnown RBP13.98□□□□□ -0.17
PRPF38B-203ENST00000370025 FAM135AQ9P2D6 1515 aa13.98□□□□□ -0.17
PRPF38B-203ENST00000370025 ADGRL1O94910 1474 aa13.98□□□□□ -0.17
PRPF38B-203ENST00000370025 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.97□□□□□ -0.173e-7■■■■□ 23.4
PRPF38B-203ENST00000370025 UNC13BO14795 1591 aa13.97□□□□□ -0.17
PRPF38B-203ENST00000370025 SCAPERQ9BY12 1400 aa13.97□□□□□ -0.17
PRPF38B-203ENST00000370025 TEX14Q8IWB6 1497 aa13.96□□□□□ -0.17
PRPF38B-203ENST00000370025 ERICH6Q7L0X2 663 aa13.96□□□□□ -0.17
PRPF38B-203ENST00000370025 MYT1LQ9UL68 1186 aa13.96□□□□□ -0.17
PRPF38B-203ENST00000370025 HIRIP3Q9BW71 556 aaPredicted RBP13.95□□□□□ -0.18
PRPF38B-203ENST00000370025 CD109Q6YHK3 1445 aa13.95□□□□□ -0.18
PRPF38B-203ENST00000370025 CYB5RLQ6IPT4 315 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms