RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 GOLGA6L1Q8N7Z2 621 aa15.73■□□□□ 0.11
HCFC1-202ENST00000369984 USP35Q9P2H5 1018 aa15.72■□□□□ 0.11
HCFC1-202ENST00000369984 TMF1P82094 1093 aa15.72■□□□□ 0.11
HCFC1-202ENST00000369984 SETQ01105 290 aaPredicted RBP15.72■□□□□ 0.11
HCFC1-202ENST00000369984 TPM4P67936 248 aa15.71■□□□□ 0.1
HCFC1-202ENST00000369984 APBB1O00213 710 aa15.7■□□□□ 0.1
HCFC1-202ENST00000369984 SIN3AQ96ST3 1273 aa15.7■□□□□ 0.1
HCFC1-202ENST00000369984 EEA1Q15075 1411 aa15.69■□□□□ 0.1
HCFC1-202ENST00000369984 SLKQ9H2G2 1235 aaPredicted RBP15.68■□□□□ 0.1
HCFC1-202ENST00000369984 RTF1Q92541 710 aaKnown RBP15.68■□□□□ 0.1
HCFC1-202ENST00000369984 HTATSF1O43719 755 aaKnown RBP15.68■□□□□ 0.1
HCFC1-202ENST00000369984 SOX12O15370 315 aa15.67■□□□□ 0.1
HCFC1-202ENST00000369984 IPO8O15397 1037 aaKnown RBP15.65■□□□□ 0.1
HCFC1-202ENST00000369984 DCAF11Q8TEB1 546 aa15.65■□□□□ 0.1
HCFC1-202ENST00000369984 GOLGA6L3A6NEY3 463 aa15.65■□□□□ 0.1
HCFC1-202ENST00000369984 SRPK2P78362 688 aaKnown RBP15.65■□□□□ 0.1
HCFC1-202ENST00000369984 PDE4CQ08493 712 aa15.65■□□□□ 0.1
HCFC1-202ENST00000369984 MORC1Q86VD1 984 aa15.65■□□□□ 0.1
HCFC1-202ENST00000369984 HSP90AA2PQ14568 343 aaPredicted RBP15.64■□□□□ 0.09
HCFC1-202ENST00000369984 HSP90B1P14625 803 aaKnown RBP15.63■□□□□ 0.09
HCFC1-202ENST00000369984 CEP164Q9UPV0 1460 aa15.63■□□□□ 0.09
HCFC1-202ENST00000369984 KRI1Q8N9T8 703 aaKnown RBP15.63■□□□□ 0.09
HCFC1-202ENST00000369984 ITPRIPQ8IWB1 547 aa15.63■□□□□ 0.09
HCFC1-202ENST00000369984 PATL2C9JE40 543 aaKnown RBP15.63■□□□□ 0.09
HCFC1-202ENST00000369984 KANK1Q14678 1352 aa15.62■□□□□ 0.09
HCFC1-202ENST00000369984 KTN1Q86UP2 1357 aaKnown RBP15.62■□□□□ 0.09
HCFC1-202ENST00000369984 VSIG10Q8N0Z9 540 aa15.61■□□□□ 0.09
HCFC1-202ENST00000369984 CSPP1Q1MSJ5 1256 aa15.61■□□□□ 0.09
HCFC1-202ENST00000369984 PHF14O94880 888 aa15.6■□□□□ 0.09
HCFC1-202ENST00000369984 GPATCH3Q96I76 525 aa15.6■□□□□ 0.09
HCFC1-202ENST00000369984 RCAN3Q9UKA8 241 aa15.6■□□□□ 0.09
HCFC1-202ENST00000369984 RWDD1Q9H446 243 aaPredicted RBP15.59■□□□□ 0.09
HCFC1-202ENST00000369984 CCER2I3L3R5 266 aa15.59■□□□□ 0.09
HCFC1-202ENST00000369984 CCDC34Q96HJ3 373 aa15.59■□□□□ 0.09
HCFC1-202ENST00000369984 CREBRFQ8IUR6 639 aa15.58■□□□□ 0.09
HCFC1-202ENST00000369984 EIF4G1Q04637 1599 aaKnown RBP15.58■□□□□ 0.09
HCFC1-202ENST00000369984 TRIM6-TRIM34B2RNG4 842 aa15.58■□□□□ 0.08
HCFC1-202ENST00000369984 KIF27Q86VH2 1401 aa15.58■□□□□ 0.08
HCFC1-202ENST00000369984 MFAP1P55081 439 aaKnown RBP15.58■□□□□ 0.08
HCFC1-202ENST00000369984 TCERG1O14776 1098 aaKnown RBP15.57■□□□□ 0.08
HCFC1-202ENST00000369984 CALD1Q05682 793 aaKnown RBP15.57■□□□□ 0.08
HCFC1-202ENST00000369984 SAFB2Q14151 953 aaKnown RBP eCLIP15.56■□□□□ 0.08
HCFC1-202ENST00000369984 PMFBP1Q8TBY8 1022 aa15.56■□□□□ 0.08
HCFC1-202ENST00000369984 CCNB3Q8WWL7 1395 aa15.56■□□□□ 0.08
HCFC1-202ENST00000369984 FBXO3Q9UK99 471 aa15.54■□□□□ 0.08
HCFC1-202ENST00000369984 RB1CC1Q8TDY2 1594 aa15.54■□□□□ 0.08
HCFC1-202ENST00000369984 IPO9Q96P70 1041 aaKnown RBP15.54■□□□□ 0.08
HCFC1-202ENST00000369984 RASSF8Q8NHQ8 419 aa15.53■□□□□ 0.08
HCFC1-202ENST00000369984 APPP05067 770 aa15.53■□□□□ 0.08
HCFC1-202ENST00000369984 FHAD1B1AJZ9 1412 aa15.53■□□□□ 0.08
HCFC1-202ENST00000369984 GORABQ5T7V8 394 aa15.52■□□□□ 0.08
HCFC1-202ENST00000369984 CHMP3Q9Y3E7 222 aa15.52■□□□□ 0.08
HCFC1-202ENST00000369984 WRNQ14191 1432 aaPredicted RBP eCLIP15.52■□□□□ 0.07
HCFC1-202ENST00000369984 ROCK2O75116 1388 aaKnown RBP15.52■□□□□ 0.07
HCFC1-202ENST00000369984 TNIKQ9UKE5 1360 aa15.51■□□□□ 0.07
HCFC1-202ENST00000369984 ZNF330Q9Y3S2 320 aaPredicted RBP15.51■□□□□ 0.07
HCFC1-202ENST00000369984 FOXD4L1Q9NU39 408 aa15.51■□□□□ 0.07
HCFC1-202ENST00000369984 TPM3P06753 285 aa15.51■□□□□ 0.07
HCFC1-202ENST00000369984 HDGFP51858 240 aaKnown RBP15.51■□□□□ 0.07
HCFC1-202ENST00000369984 TAF7LQ5H9L4 462 aa15.51■□□□□ 0.07
HCFC1-202ENST00000369984 ZNF771Q7L3S4 317 aaPredicted RBP15.51■□□□□ 0.07
HCFC1-202ENST00000369984 HDGFL2Q7Z4V5 671 aaPredicted RBP15.5■□□□□ 0.07
HCFC1-202ENST00000369984 CEP89Q96ST8 783 aa15.5■□□□□ 0.07
HCFC1-202ENST00000369984 NOL8Q76FK4 1167 aaKnown RBP15.5■□□□□ 0.07
HCFC1-202ENST00000369984 ARHGAP35Q9NRY4 1499 aa15.49■□□□□ 0.07
HCFC1-202ENST00000369984 BAZ1BQ9UIG0 1483 aaKnown RBP15.49■□□□□ 0.07
HCFC1-202ENST00000369984 SPAG9O60271 1321 aaKnown RBP15.49■□□□□ 0.07
HCFC1-202ENST00000369984 U2AF1L5P0DN76 240 aaPredicted RBP15.49■□□□□ 0.07
HCFC1-202ENST00000369984 U2AF1Q01081 240 aaKnown RBP eCLIP15.49■□□□□ 0.07
HCFC1-202ENST00000369984 PAK3O75914 559 aaPredicted RBP15.48■□□□□ 0.07
HCFC1-202ENST00000369984 ANO8Q9HCE9 1232 aaPredicted RBP15.48■□□□□ 0.07
HCFC1-202ENST00000369984 STK26Q9P289 416 aa15.48■□□□□ 0.07
HCFC1-202ENST00000369984 ST18O60284 1047 aa15.48■□□□□ 0.07
HCFC1-202ENST00000369984 KIF16BQ96L93 1317 aa15.48■□□□□ 0.07
HCFC1-202ENST00000369984 HSPA5P11021 654 aaKnown RBP15.48■□□□□ 0.07
HCFC1-202ENST00000369984 SMC4Q9NTJ3 1288 aa15.48■□□□□ 0.07
HCFC1-202ENST00000369984 TMX4Q9H1E5 349 aaPredicted RBP15.47■□□□□ 0.07
HCFC1-202ENST00000369984 SETD5Q9C0A6 1442 aa15.47■□□□□ 0.07
HCFC1-202ENST00000369984 DDX11L8A8MPP1 907 aa15.46■□□□□ 0.07
HCFC1-202ENST00000369984 PES1O00541 588 aaKnown RBP15.46■□□□□ 0.07
HCFC1-202ENST00000369984 RALBP1Q15311 655 aa15.46■□□□□ 0.07
HCFC1-202ENST00000369984 RSPH6AQ9H0K4 717 aa15.46■□□□□ 0.06
HCFC1-202ENST00000369984 FOXD4L5Q5VV16 416 aaPredicted RBP15.45■□□□□ 0.06
HCFC1-202ENST00000369984 FOXD4L4Q8WXT5 416 aaPredicted RBP15.45■□□□□ 0.06
HCFC1-202ENST00000369984 HMMRO75330 724 aa15.45■□□□□ 0.06
HCFC1-202ENST00000369984 STK31Q9BXU1 1019 aa15.45■□□□□ 0.06
HCFC1-202ENST00000369984 TPD52L1Q16890 204 aaPredicted RBP15.45■□□□□ 0.06
HCFC1-202ENST00000369984 TSR1Q2NL82 804 aaKnown RBP15.44■□□□□ 0.06
HCFC1-202ENST00000369984 ERCC6Q03468 1493 aa15.43■□□□□ 0.06
HCFC1-202ENST00000369984 CCAR2Q8N163 923 aaKnown RBP15.43■□□□□ 0.06
HCFC1-202ENST00000369984 SF3A1Q15459 793 aaKnown RBP15.43■□□□□ 0.06
HCFC1-202ENST00000369984 GOLGA6L19H0YKK7 550 aa15.42■□□□□ 0.06
HCFC1-202ENST00000369984 EIF3AQ14152 1382 aaKnown RBP15.42■□□□□ 0.06
HCFC1-202ENST00000369984 H3BQV1 296 aa15.42■□□□□ 0.06
HCFC1-202ENST00000369984 IFFO2Q5TF58 517 aa15.42■□□□□ 0.06
HCFC1-202ENST00000369984 VPS53Q5VIR6 699 aa15.42■□□□□ 0.06
HCFC1-202ENST00000369984 SLC4A10Q6U841 1118 aa15.42■□□□□ 0.06
HCFC1-202ENST00000369984 RRP12Q5JTH9 1297 aaKnown RBP15.41■□□□□ 0.06
HCFC1-202ENST00000369984 TIMELESSQ9UNS1 1208 aa15.41■□□□□ 0.06
HCFC1-202ENST00000369984 KIF3AQ9Y496 699 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms